RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 TEKT1Q969V4 418 aa14.21□□□□□ -0.13
VTN-203ENST00000542029 GNL3LQ9NVN8 582 aaKnown RBP14.21□□□□□ -0.13
VTN-203ENST00000542029 CEP126Q9P2H0 1117 aa14.21□□□□□ -0.13
VTN-203ENST00000542029 PCDHAC2Q9Y5I4 1007 aa14.21□□□□□ -0.13
VTN-203ENST00000542029 MANSC4A6NHS7 340 aaPredicted RBP14.2□□□□□ -0.14
VTN-203ENST00000542029 GNAI3P08754 354 aa14.2□□□□□ -0.14
VTN-203ENST00000542029 BCAMP50895 628 aa14.2□□□□□ -0.14
VTN-203ENST00000542029 TMOD2Q9NZR1 351 aa14.2□□□□□ -0.14
VTN-203ENST00000542029 IQSEC3Q9UPP2 1182 aaPredicted RBP14.2□□□□□ -0.14
VTN-203ENST00000542029 IL15P40933 162 aaPredicted RBP14.19□□□□□ -0.14
VTN-203ENST00000542029 NBPF12Q5TAG4 269 aaPredicted RBP14.19□□□□□ -0.14
VTN-203ENST00000542029 INTS3Q68E01 1043 aaKnown RBP14.19□□□□□ -0.14
VTN-203ENST00000542029 CTU1Q7Z7A3 348 aaKnown RBP14.19□□□□□ -0.14
VTN-203ENST00000542029 ANKRD13AQ8IZ07 590 aa14.19□□□□□ -0.14
VTN-203ENST00000542029 CFHR5Q9BXR6 569 aa14.19□□□□□ -0.14
VTN-203ENST00000542029 TDRD3Q9H7E2 651 aaKnown RBP14.19□□□□□ -0.14
VTN-203ENST00000542029 SPEF2Q9C093 1822 aa14.19□□□□□ -0.14
VTN-203ENST00000542029 ZBTB22O15209 634 aa14.18□□□□□ -0.14
VTN-203ENST00000542029 MKRN3Q13064 507 aaKnown RBP14.18□□□□□ -0.14
VTN-203ENST00000542029 PKN2Q16513 984 aaKnown RBP14.18□□□□□ -0.14
VTN-203ENST00000542029 FKBP1CQ5VVH2 108 aa14.18□□□□□ -0.14
VTN-203ENST00000542029 HHIPL2Q6UWX4 724 aa14.18□□□□□ -0.14
VTN-203ENST00000542029 ATG9AQ7Z3C6 839 aa14.18□□□□□ -0.14
VTN-203ENST00000542029 HOOK2Q96ED9 719 aa14.18□□□□□ -0.14
VTN-203ENST00000542029 ZDHHC15Q96MV8 337 aa14.18□□□□□ -0.14
VTN-203ENST00000542029 COPRSQ9NQ92 184 aa14.18□□□□□ -0.14
VTN-203ENST00000542029 LRRFIP2Q9Y608 721 aaKnown RBP14.18□□□□□ -0.14
VTN-203ENST00000542029 SEMA3EO15041 775 aa14.17□□□□□ -0.14
VTN-203ENST00000542029 USP2O75604 605 aaPredicted RBP14.17□□□□□ -0.14
VTN-203ENST00000542029 ATP2B3Q16720 1220 aa14.17□□□□□ -0.14
VTN-203ENST00000542029 OTUD7BQ6GQQ9 843 aa14.17□□□□□ -0.14
VTN-203ENST00000542029 WNK4Q96J92 1243 aa14.17□□□□□ -0.14
VTN-203ENST00000542029 SIL1Q9H173 461 aa14.17□□□□□ -0.14
VTN-203ENST00000542029 AOX1Q06278 1338 aa14.16□□□□□ -0.14
VTN-203ENST00000542029 TCP10L2B9ZVM9 353 aa14.16□□□□□ -0.14
VTN-203ENST00000542029 GPR25O00155 361 aa14.16□□□□□ -0.14
VTN-203ENST00000542029 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
VTN-203ENST00000542029 RGS19P49795 217 aa14.16□□□□□ -0.14
VTN-203ENST00000542029 FAM83AQ86UY5 434 aa14.16□□□□□ -0.14
VTN-203ENST00000542029 ZNF296Q8WUU4 475 aaPredicted RBP14.16□□□□□ -0.14
VTN-203ENST00000542029 MEIS3Q99687 375 aa14.16□□□□□ -0.14
VTN-203ENST00000542029 DENND2AQ9ULE3 1009 aa14.16□□□□□ -0.14
VTN-203ENST00000542029 MAP3K9P80192 1104 aa14.15□□□□□ -0.14
VTN-203ENST00000542029 MTX1Q13505 466 aa14.15□□□□□ -0.14
VTN-203ENST00000542029 GRIK5Q16478 980 aa14.15□□□□□ -0.14
VTN-203ENST00000542029 APOBEC3HQ6NTF7 200 aaKnown RBP14.15□□□□□ -0.14
VTN-203ENST00000542029 ATF7IPQ6VMQ6 1270 aa14.15□□□□□ -0.14
VTN-203ENST00000542029 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
VTN-203ENST00000542029 ZGPATQ8N5A5 531 aaKnown RBP14.15□□□□□ -0.14
VTN-203ENST00000542029 CLMNQ96JQ2 1002 aa14.15□□□□□ -0.14
VTN-203ENST00000542029 TEPSINQ96N21 525 aa14.15□□□□□ -0.14
VTN-203ENST00000542029 FZD1Q9UP38 647 aa14.15□□□□□ -0.14
VTN-203ENST00000542029 AKAP2Q9Y2D5 859 aa14.15□□□□□ -0.14
VTN-203ENST00000542029 SSC5DA1L4H1 1573 aa14.14□□□□□ -0.15
VTN-203ENST00000542029 ZNF646O15015 1829 aaPredicted RBP14.14□□□□□ -0.15
VTN-203ENST00000542029 SRGAP3O43295 1099 aa14.14□□□□□ -0.15
VTN-203ENST00000542029 FKTNO75072 461 aa14.14□□□□□ -0.15
VTN-203ENST00000542029 TRIM27P14373 513 aa14.14□□□□□ -0.15
VTN-203ENST00000542029 TMEM39BQ9GZU3 492 aa14.14□□□□□ -0.15
VTN-203ENST00000542029 CSADQ9Y600 493 aa14.14□□□□□ -0.15
VTN-203ENST00000542029 SALL1Q9NSC2 1324 aa14.14□□□□□ -0.15
VTN-203ENST00000542029 GNAI2P04899 355 aa14.13□□□□□ -0.15
VTN-203ENST00000542029 LDHBP07195 334 aaKnown RBP14.13□□□□□ -0.15
VTN-203ENST00000542029 MLLT1Q03111 559 aaPredicted RBP14.13□□□□□ -0.15
VTN-203ENST00000542029 DCAF15Q66K64 600 aa14.13□□□□□ -0.15
VTN-203ENST00000542029 PA2G4Q9UQ80 394 aaKnown RBP14.13□□□□□ -0.15
VTN-203ENST00000542029 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
VTN-203ENST00000542029 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.12□□□□□ -0.15
VTN-203ENST00000542029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.12□□□□□ -0.15
VTN-203ENST00000542029 FRAT1Q92837 279 aaPredicted RBP14.12□□□□□ -0.15
VTN-203ENST00000542029 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.12□□□□□ -0.15
VTN-203ENST00000542029 CASP8AP2Q9UKL3 1982 aa14.12□□□□□ -0.15
VTN-203ENST00000542029 PDS5AQ29RF7 1337 aaKnown RBP14.12□□□□□ -0.15
VTN-203ENST00000542029 RPAP1Q9BWH6 1393 aaPredicted RBP14.11□□□□□ -0.15
VTN-203ENST00000542029 GTF2A2P52657 109 aa14.11□□□□□ -0.15
VTN-203ENST00000542029 MVPQ14764 893 aaKnown RBP14.11□□□□□ -0.15
VTN-203ENST00000542029 ZKSCAN2Q63HK3 967 aa14.11□□□□□ -0.15
VTN-203ENST00000542029 CCDC102BQ68D86 513 aa14.11□□□□□ -0.15
VTN-203ENST00000542029 SLF2Q8IX21 1173 aa14.11□□□□□ -0.15
VTN-203ENST00000542029 OPTNQ96CV9 577 aa14.11□□□□□ -0.15
VTN-203ENST00000542029 ELP3Q9H9T3 547 aa14.11□□□□□ -0.15
VTN-203ENST00000542029 IGF2BP3O00425 579 aaKnown RBP eCLIP14.1□□□□□ -0.15
VTN-203ENST00000542029 WDHD1O75717 1129 aaPredicted RBP14.1□□□□□ -0.15
VTN-203ENST00000542029 BCAR3O75815 825 aa14.1□□□□□ -0.15
VTN-203ENST00000542029 PRDX5P30044 214 aa14.1□□□□□ -0.15
VTN-203ENST00000542029 PHKA1P46020 1223 aa14.1□□□□□ -0.15
VTN-203ENST00000542029 CACNB3P54284 484 aa14.1□□□□□ -0.15
VTN-203ENST00000542029 HNRNPUQ00839 825 aaKnown RBP eCLIP14.1□□□□□ -0.15
VTN-203ENST00000542029 VGLL4Q14135 290 aa14.1□□□□□ -0.15
VTN-203ENST00000542029 DIEXFQ68CQ4 756 aaKnown RBP14.1□□□□□ -0.15
VTN-203ENST00000542029 SPTY2D1Q68D10 685 aaPredicted RBP14.1□□□□□ -0.15
VTN-203ENST00000542029 FBXO46Q6PJ61 603 aaPredicted RBP14.1□□□□□ -0.15
VTN-203ENST00000542029 ERO1BQ86YB8 467 aa14.1□□□□□ -0.15
VTN-203ENST00000542029 FAM151AQ8WW52 585 aa14.1□□□□□ -0.15
VTN-203ENST00000542029 DAGLAQ9Y4D2 1042 aa14.1□□□□□ -0.15
VTN-203ENST00000542029 A0A1B0GUL6 1792 aa14.09□□□□□ -0.15
VTN-203ENST00000542029 A0A1B0GUL7 405 aa14.09□□□□□ -0.15
VTN-203ENST00000542029 SPDYE5A6NIY4 337 aa14.09□□□□□ -0.15
VTN-203ENST00000542029 GJA5P36382 358 aa14.09□□□□□ -0.15
VTN-203ENST00000542029 G3BP1Q13283 466 aaKnown RBP eCLIP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms