RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 RBSNQ9H1K0 784 aa6.93□□□□□ -1.3
PTPRD-214ENST00000540109 CFAP45Q9UL16 551 aa6.93□□□□□ -1.3
PTPRD-214ENST00000540109 SLU7O95391 586 aaKnown RBP6.93□□□□□ -1.3
PTPRD-214ENST00000540109 ZFYP08048 801 aaPredicted RBP6.93□□□□□ -1.3
PTPRD-214ENST00000540109 MYL6BP14649 208 aa6.93□□□□□ -1.3
PTPRD-214ENST00000540109 HSPA2P54652 639 aa6.93□□□□□ -1.3
PTPRD-214ENST00000540109 TAX1BP1Q86VP1 789 aa6.93□□□□□ -1.3
PTPRD-214ENST00000540109 ERO1AQ96HE7 468 aa6.93□□□□□ -1.3
PTPRD-214ENST00000540109 FSD1Q9BTV5 496 aa6.93□□□□□ -1.3
PTPRD-214ENST00000540109 IRAK4Q9NWZ3 460 aa6.93□□□□□ -1.3
PTPRD-214ENST00000540109 ELP1O95163 1332 aa6.93□□□□□ -1.3
PTPRD-214ENST00000540109 CCDC172P0C7W6 258 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 ARHGAP25P42331 645 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 SLC39A6Q13433 755 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 ARHGAP29Q52LW3 1261 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 ICE2Q659A1 982 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 RGS22Q8NE09 1264 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 NUP62CLQ9H1M0 184 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 CEP83Q9Y592 693 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 PALLDQ8WX93 1383 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 FSD2A1L4K1 749 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 MYO1BO43795 1136 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 EIF5P55010 431 aaKnown RBP6.92□□□□□ -1.3
PTPRD-214ENST00000540109 ARFGAP3Q9NP61 516 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 HELLSQ9NRZ9 838 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 EBAG9O00559 213 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 KIF3CO14782 793 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 PCCAP05165 728 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-214ENST00000540109 ATP2B3Q16720 1220 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 TNNI3KQ59H18 835 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 SPECC1LQ69YQ0 1117 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 RASSF8Q8NHQ8 419 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 TMEM51Q9NW97 253 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 FPGT-TNNI3KV9GXZ4 949 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 ERVV-1B6SEH8 477 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 ZSCAN25Q6NSZ9 544 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 CCDC186Q7Z3E2 898 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 OTUD6BQ8N6M0 293 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 CCDC148Q8NFR7 591 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 CALR3Q96L12 384 aaKnown RBP6.92□□□□□ -1.3
PTPRD-214ENST00000540109 ZNF335Q9H4Z2 1342 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-214ENST00000540109 MED23Q9ULK4 1368 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 DHX16O60231 1041 aaKnown RBP6.92□□□□□ -1.3
PTPRD-214ENST00000540109 RBM26Q5T8P6 1007 aaKnown RBP6.92□□□□□ -1.3
PTPRD-214ENST00000540109 FAM114A1Q8IWE2 563 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 PPP1R9BQ96SB3 815 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 ISCA1Q9BUE6 129 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 MRFAP1Q9Y605 127 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 SH3TC1Q8TE82 1336 aa6.92□□□□□ -1.3
PTPRD-214ENST00000540109 RFX5P48382 616 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-214ENST00000540109 ANXA1P04083 346 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 TXLNAP40222 546 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 ELF2Q15723 593 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 UTP14AQ9BVJ6 771 aaKnown RBP6.91□□□□□ -1.3
PTPRD-214ENST00000540109 NWD2Q9ULI1 1742 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 EYA2O00167 538 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 BRD1O95696 1058 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 PDE6BP35913 854 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 CASP7P55210 303 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 TCIRG1Q13488 830 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 IMMTQ16891 758 aaKnown RBP6.91□□□□□ -1.3
PTPRD-214ENST00000540109 ISM2Q6H9L7 571 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 UBE3BQ7Z3V4 1068 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 CEP112Q8N8E3 955 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 MAP4K1Q92918 833 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 RABEP2Q9H5N1 569 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 SPATS2LQ9NUQ6 558 aaKnown RBP6.91□□□□□ -1.3
PTPRD-214ENST00000540109 PPP1R1BQ9UD71 204 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-214ENST00000540109 USP16Q9Y5T5 823 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 SNX14Q9Y5W7 946 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 SFPQP23246 707 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTPRD-214ENST00000540109 CA8P35219 290 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 MAP3K11Q16584 847 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 MFSD4BQ5TF39 518 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 NBPF11Q86T75 865 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 RNF168Q8IYW5 571 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-214ENST00000540109 HAUS7Q99871 368 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 ZSWIM6Q9HCJ5 1215 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 ZNF831Q5JPB2 1677 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 OPA1O60313 960 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 SASH1O94885 1247 aa6.91□□□□□ -1.3
PTPRD-214ENST00000540109 TJP1Q07157 1748 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 EXOC5O00471 708 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 HNRNPH2P55795 449 aaKnown RBP6.9□□□□□ -1.3
PTPRD-214ENST00000540109 PTPN12Q05209 780 aaKnown RBP6.9□□□□□ -1.3
PTPRD-214ENST00000540109 KAZALD1Q96I82 304 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 PDRG1Q9NUG6 133 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 CTNNA3Q9UI47 895 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 RBBP5Q15291 538 aaKnown RBP6.9□□□□□ -1.3
PTPRD-214ENST00000540109 CCDC181Q5TID7 509 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 CKAP2LQ8IYA6 745 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 RPUSD2Q8IZ73 545 aaKnown RBP6.9□□□□□ -1.3
PTPRD-214ENST00000540109 CNKSR2Q8WXI2 1034 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 EAF2Q96CJ1 260 aaPredicted RBP6.9□□□□□ -1.3
PTPRD-214ENST00000540109 CARMIL3Q8ND23 1372 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 CASTP20810 708 aaKnown RBP6.9□□□□□ -1.3
PTPRD-214ENST00000540109 PTGS1P23219 599 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 ZNF445P59923 1031 aa6.9□□□□□ -1.3
PTPRD-214ENST00000540109 CCDC57Q2TAC2 916 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms