RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ZNF70Q9UC06 446 aaPredicted RBP19.12■□□□□ 0.65
UBE3B-211ENST00000539843 PCDHAC2Q9Y5I4 1007 aa19.12■□□□□ 0.65
UBE3B-211ENST00000539843 NBPF12Q5TAG4 269 aaPredicted RBP19.11■□□□□ 0.65
UBE3B-211ENST00000539843 HOOK2Q96ED9 719 aa19.11■□□□□ 0.65
UBE3B-211ENST00000539843 TDRD3Q9H7E2 651 aaKnown RBP19.11■□□□□ 0.65
UBE3B-211ENST00000539843 IQSEC3Q9UPP2 1182 aaPredicted RBP19.11■□□□□ 0.65
UBE3B-211ENST00000539843 SUGT1Q9Y2Z0 365 aa19.11■□□□□ 0.65
UBE3B-211ENST00000539843 ECM29Q5VYK3 1845 aa19.11■□□□□ 0.65
UBE3B-211ENST00000539843 EYA2O00167 538 aa19.1■□□□□ 0.65
UBE3B-211ENST00000539843 FKTNO75072 461 aa19.1■□□□□ 0.65
UBE3B-211ENST00000539843 WNK4Q96J92 1243 aa19.1■□□□□ 0.65
UBE3B-211ENST00000539843 CFHR5Q9BXR6 569 aa19.1■□□□□ 0.65
UBE3B-211ENST00000539843 TCP10L2B9ZVM9 353 aa19.09■□□□□ 0.65
UBE3B-211ENST00000539843 CCER2I3L3R5 266 aa19.09■□□□□ 0.65
UBE3B-211ENST00000539843 LPIN2Q92539 896 aa19.09■□□□□ 0.65
UBE3B-211ENST00000539843 GNL3LQ9NVN8 582 aaKnown RBP19.09■□□□□ 0.65
UBE3B-211ENST00000539843 FBXO3Q9UK99 471 aa19.09■□□□□ 0.65
UBE3B-211ENST00000539843 FZD1Q9UP38 647 aa19.09■□□□□ 0.65
UBE3B-211ENST00000539843 IFNL1Q8IU54 200 aa19.08■□□□□ 0.64
UBE3B-211ENST00000539843 VGLL2Q8N8G2 317 aa19.08■□□□□ 0.64
UBE3B-211ENST00000539843 KLHDC4Q8TBB5 520 aa19.08■□□□□ 0.64
UBE3B-211ENST00000539843 WDR66Q8TBY9 1149 aa19.08■□□□□ 0.64
UBE3B-211ENST00000539843 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.64
UBE3B-211ENST00000539843 CSADQ9Y600 493 aa19.08■□□□□ 0.64
UBE3B-211ENST00000539843 SSC5DA1L4H1 1573 aa19.07■□□□□ 0.64
UBE3B-211ENST00000539843 WDHD1O75717 1129 aaPredicted RBP19.07■□□□□ 0.64
UBE3B-211ENST00000539843 BCAMP50895 628 aa19.07■□□□□ 0.64
UBE3B-211ENST00000539843 CLMNQ96JQ2 1002 aa19.07■□□□□ 0.64
UBE3B-211ENST00000539843 CEP126Q9P2H0 1117 aa19.07■□□□□ 0.64
UBE3B-211ENST00000539843 ARAP2Q8WZ64 1704 aa19.07■□□□□ 0.64
UBE3B-211ENST00000539843 USP2O75604 605 aaPredicted RBP19.06■□□□□ 0.64
UBE3B-211ENST00000539843 MRIQ9BWK5 157 aa19.06■□□□□ 0.64
UBE3B-211ENST00000539843 NOB1Q9ULX3 412 aaKnown RBP19.06■□□□□ 0.64
UBE3B-211ENST00000539843 HPS5Q9UPZ3 1129 aa19.06■□□□□ 0.64
UBE3B-211ENST00000539843 FBXO46Q6PJ61 603 aaPredicted RBP19.05■□□□□ 0.64
UBE3B-211ENST00000539843 ZDHHC15Q96MV8 337 aa19.05■□□□□ 0.64
UBE3B-211ENST00000539843 ELP3Q9H9T3 547 aa19.05■□□□□ 0.64
UBE3B-211ENST00000539843 CIAO1O76071 339 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 FGFR2P21802 821 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 SOX10P56693 466 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 MAP3K9P80192 1104 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 ATP2B3Q16720 1220 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 DCAF15Q66K64 600 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 TRMT2AQ8IZ69 625 aaKnown RBP19.04■□□□□ 0.64
UBE3B-211ENST00000539843 OPTNQ96CV9 577 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 ERO1AQ96HE7 468 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 TMEM39BQ9GZU3 492 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 SIL1Q9H173 461 aa19.04■□□□□ 0.64
UBE3B-211ENST00000539843 AOX1Q06278 1338 aa19.03■□□□□ 0.64
UBE3B-211ENST00000539843 IL15P40933 162 aaPredicted RBP19.03■□□□□ 0.64
UBE3B-211ENST00000539843 RFX5P48382 616 aaPredicted RBP19.03■□□□□ 0.64
UBE3B-211ENST00000539843 FKBP1CQ5VVH2 108 aa19.03■□□□□ 0.64
UBE3B-211ENST00000539843 HHIPL2Q6UWX4 724 aa19.03■□□□□ 0.64
UBE3B-211ENST00000539843 FAM83AQ86UY5 434 aa19.03■□□□□ 0.64
UBE3B-211ENST00000539843 IPO8O15397 1037 aaKnown RBP19.02■□□□□ 0.64
UBE3B-211ENST00000539843 GNAI3P08754 354 aa19.02■□□□□ 0.64
UBE3B-211ENST00000539843 GTF2A2P52657 109 aa19.02■□□□□ 0.64
UBE3B-211ENST00000539843 ARHGEF6Q15052 776 aa19.02■□□□□ 0.64
UBE3B-211ENST00000539843 LRRFIP2Q9Y608 721 aaKnown RBP19.02■□□□□ 0.64
UBE3B-211ENST00000539843 IGF2BP3O00425 579 aaKnown RBP eCLIP19.01■□□□□ 0.63
UBE3B-211ENST00000539843 SEMA3EO15041 775 aa19.01■□□□□ 0.63
UBE3B-211ENST00000539843 ZGPATQ8N5A5 531 aaKnown RBP19.01■□□□□ 0.63
UBE3B-211ENST00000539843 ARHGAP45Q92619 1136 aa19.01■□□□□ 0.63
UBE3B-211ENST00000539843 TEPSINQ96N21 525 aa19.01■□□□□ 0.63
UBE3B-211ENST00000539843 DENND2AQ9ULE3 1009 aa19.01■□□□□ 0.63
UBE3B-211ENST00000539843 LDHBP07195 334 aaKnown RBP19■□□□□ 0.63
UBE3B-211ENST00000539843 VGLL4Q14135 290 aa19■□□□□ 0.63
UBE3B-211ENST00000539843 GRIK5Q16478 980 aa19■□□□□ 0.63
UBE3B-211ENST00000539843 TRIM17Q9Y577 477 aa19■□□□□ 0.63
UBE3B-211ENST00000539843 RPAP1Q9BWH6 1393 aaPredicted RBP18.99■□□□□ 0.63
UBE3B-211ENST00000539843 CCL15-CCL14A0A0B4J2E2 113 aa18.99■□□□□ 0.63
UBE3B-211ENST00000539843 CACNB3P54284 484 aa18.99■□□□□ 0.63
UBE3B-211ENST00000539843 CCL15Q16663 113 aa18.99■□□□□ 0.63
UBE3B-211ENST00000539843 ATG9AQ7Z3C6 839 aa18.99■□□□□ 0.63
UBE3B-211ENST00000539843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.99■□□□□ 0.63
UBE3B-211ENST00000539843 WRNIP1Q96S55 665 aa18.99■□□□□ 0.63
UBE3B-211ENST00000539843 ZFYVE28Q9HCC9 887 aa18.99■□□□□ 0.63
UBE3B-211ENST00000539843 TESPA1A2RU30 521 aaPredicted RBP18.98■□□□□ 0.63
UBE3B-211ENST00000539843 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
UBE3B-211ENST00000539843 CRHR2Q13324 411 aa18.98■□□□□ 0.63
UBE3B-211ENST00000539843 APOBEC3HQ6NTF7 200 aaKnown RBP18.98■□□□□ 0.63
UBE3B-211ENST00000539843 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.98■□□□□ 0.63
UBE3B-211ENST00000539843 SLF2Q8IX21 1173 aa18.98■□□□□ 0.63
UBE3B-211ENST00000539843 OTUD5Q96G74 571 aa18.98■□□□□ 0.63
UBE3B-211ENST00000539843 ZNF341Q9BYN7 854 aa18.98■□□□□ 0.63
UBE3B-211ENST00000539843 AKAP2Q9Y2D5 859 aa18.98■□□□□ 0.63
UBE3B-211ENST00000539843 CETPP11597 493 aa18.97■□□□□ 0.63
UBE3B-211ENST00000539843 GJA5P36382 358 aa18.97■□□□□ 0.63
UBE3B-211ENST00000539843 SP3Q02447 781 aa18.97■□□□□ 0.63
UBE3B-211ENST00000539843 TAF1CQ15572 869 aaPredicted RBP18.97■□□□□ 0.63
UBE3B-211ENST00000539843 ERO1BQ86YB8 467 aa18.97■□□□□ 0.63
UBE3B-211ENST00000539843 R3HDMLQ9H3Y0 253 aa18.97■□□□□ 0.63
UBE3B-211ENST00000539843 COPRSQ9NQ92 184 aa18.97■□□□□ 0.63
UBE3B-211ENST00000539843 SPDYE5A6NIY4 337 aa18.96■□□□□ 0.63
UBE3B-211ENST00000539843 SRGAP3O43295 1099 aa18.96■□□□□ 0.63
UBE3B-211ENST00000539843 CDAN1Q8IWY9 1227 aa18.96■□□□□ 0.63
UBE3B-211ENST00000539843 FAM151AQ8WW52 585 aa18.96■□□□□ 0.63
UBE3B-211ENST00000539843 MEIS3Q99687 375 aa18.96■□□□□ 0.63
UBE3B-211ENST00000539843 EFCC1Q9HA90 598 aa18.96■□□□□ 0.63
UBE3B-211ENST00000539843 SALL1Q9NSC2 1324 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms