RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
VBP1-203ENST00000535916 DTX1Q86Y01 620 aa9.38□□□□□ -0.91
VBP1-203ENST00000535916 CLEC4MQ9H2X3 399 aaPredicted RBP9.38□□□□□ -0.91
VBP1-203ENST00000535916 CTSBP07858 339 aa9.37□□□□□ -0.91
VBP1-203ENST00000535916 HOXA10P31260 410 aaPredicted RBP9.37□□□□□ -0.91
VBP1-203ENST00000535916 CDPF1Q6NVV7 123 aa9.37□□□□□ -0.91
VBP1-203ENST00000535916 FBXL6Q8N531 539 aa9.37□□□□□ -0.91
VBP1-203ENST00000535916 C2CD4AQ8NCU7 369 aaPredicted RBP9.37□□□□□ -0.91
VBP1-203ENST00000535916 F13BP05160 661 aa9.36□□□□□ -0.91
VBP1-203ENST00000535916 ORC1Q13415 861 aa9.36□□□□□ -0.91
VBP1-203ENST00000535916 SHISA5Q8N114 240 aa9.36□□□□□ -0.91
VBP1-203ENST00000535916 FBLIM1Q8WUP2 373 aa9.36□□□□□ -0.91
VBP1-203ENST00000535916 COL17A1Q9UMD9 1497 aaPredicted RBP9.35□□□□□ -0.91
VBP1-203ENST00000535916 FAM95CA0A1B0GW59 222 aa9.35□□□□□ -0.91
VBP1-203ENST00000535916 NDUFB5O43674 189 aa9.35□□□□□ -0.91
VBP1-203ENST00000535916 MAOBP27338 520 aa9.35□□□□□ -0.91
VBP1-203ENST00000535916 IRAK1P51617 712 aa9.35□□□□□ -0.91
VBP1-203ENST00000535916 USP11P51784 963 aa9.35□□□□□ -0.91
VBP1-203ENST00000535916 SOX4Q06945 474 aaPredicted RBP9.35□□□□□ -0.91
VBP1-203ENST00000535916 NFKBIBQ15653 356 aa9.35□□□□□ -0.91
VBP1-203ENST00000535916 PIM2Q9P1W9 311 aa9.35□□□□□ -0.91
VBP1-203ENST00000535916 TXKP42681 527 aa9.34□□□□□ -0.91
VBP1-203ENST00000535916 KIAA0319Q5VV43 1072 aa9.34□□□□□ -0.91
VBP1-203ENST00000535916 KRTAP4-9Q9BYQ8 210 aa9.34□□□□□ -0.91
VBP1-203ENST00000535916 NPHS2Q9NP85 383 aa9.34□□□□□ -0.91
VBP1-203ENST00000535916 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
VBP1-203ENST00000535916 EIF4EBP3O60516 100 aaPredicted RBP9.33□□□□□ -0.92
VBP1-203ENST00000535916 ADH5P11766 374 aa9.33□□□□□ -0.92
VBP1-203ENST00000535916 POU4F3Q15319 338 aa9.33□□□□□ -0.92
VBP1-203ENST00000535916 PAOXQ6QHF9 649 aa9.33□□□□□ -0.92
VBP1-203ENST00000535916 FAM129BQ96TA1 746 aa9.33□□□□□ -0.92
VBP1-203ENST00000535916 TRIM56Q9BRZ2 755 aaKnown RBP9.33□□□□□ -0.92
VBP1-203ENST00000535916 PAX4O43316 350 aa9.32□□□□□ -0.92
VBP1-203ENST00000535916 CPNE3O75131 537 aaKnown RBP9.32□□□□□ -0.92
VBP1-203ENST00000535916 CYP11A1P05108 521 aa9.32□□□□□ -0.92
VBP1-203ENST00000535916 NEFLP07196 543 aa9.32□□□□□ -0.92
VBP1-203ENST00000535916 GIMAP7Q8NHV1 300 aa9.32□□□□□ -0.92
VBP1-203ENST00000535916 OSBPL1AQ9BXW6 950 aa9.32□□□□□ -0.92
VBP1-203ENST00000535916 EHD4Q9H223 541 aa9.32□□□□□ -0.92
VBP1-203ENST00000535916 LEMD3Q9Y2U8 911 aa9.32□□□□□ -0.92
VBP1-203ENST00000535916 ACTL7BQ9Y614 415 aa9.32□□□□□ -0.92
VBP1-203ENST00000535916 ECEL1O95672 775 aa9.31□□□□□ -0.92
VBP1-203ENST00000535916 WNT11O96014 354 aa9.31□□□□□ -0.92
VBP1-203ENST00000535916 B3GALT4O96024 378 aa9.31□□□□□ -0.92
VBP1-203ENST00000535916 ADMP35318 185 aa9.31□□□□□ -0.92
VBP1-203ENST00000535916 PDE3BQ13370 1112 aa9.31□□□□□ -0.92
VBP1-203ENST00000535916 EZH1Q92800 747 aaPredicted RBP9.31□□□□□ -0.92
VBP1-203ENST00000535916 ZNF576Q9H609 170 aa9.31□□□□□ -0.92
VBP1-203ENST00000535916 GPR182O15218 404 aa9.3□□□□□ -0.92
VBP1-203ENST00000535916 ITPKAP23677 461 aa9.3□□□□□ -0.92
VBP1-203ENST00000535916 AKAP4Q5JQC9 854 aa9.3□□□□□ -0.92
VBP1-203ENST00000535916 TXNDC2Q86VQ3 553 aa9.3□□□□□ -0.92
VBP1-203ENST00000535916 ARID3AQ99856 593 aa9.3□□□□□ -0.92
VBP1-203ENST00000535916 IGHA2P01877 340 aa9.29□□□□□ -0.92
VBP1-203ENST00000535916 FOSL1P15407 271 aa9.29□□□□□ -0.92
VBP1-203ENST00000535916 RAB6AP20340 208 aa9.29□□□□□ -0.92
VBP1-203ENST00000535916 TBC1D32Q96NH3 1257 aa9.29□□□□□ -0.92
VBP1-203ENST00000535916 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
VBP1-203ENST00000535916 YIPF2Q9BWQ6 316 aa9.29□□□□□ -0.92
VBP1-203ENST00000535916 PRKAG2Q9UGJ0 569 aa9.29□□□□□ -0.92
VBP1-203ENST00000535916 EIF1AYO14602 144 aaKnown RBP9.28□□□□□ -0.92
VBP1-203ENST00000535916 TAL1P17542 331 aaPredicted RBP9.28□□□□□ -0.92
VBP1-203ENST00000535916 CPSF6Q16630 551 aaKnown RBP eCLIP9.28□□□□□ -0.92
VBP1-203ENST00000535916 MSMPQ1L6U9 139 aa9.28□□□□□ -0.92
VBP1-203ENST00000535916 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
VBP1-203ENST00000535916 ZAR1Q86SH2 424 aa9.28□□□□□ -0.92
VBP1-203ENST00000535916 RETREG2Q8NC44 543 aa9.28□□□□□ -0.92
VBP1-203ENST00000535916 CITED4Q96RK1 184 aa9.28□□□□□ -0.92
VBP1-203ENST00000535916 NIF3L1Q9GZT8 377 aa9.28□□□□□ -0.92
VBP1-203ENST00000535916 ABCB6Q9NP58 842 aa9.28□□□□□ -0.92
VBP1-203ENST00000535916 NFICP08651 508 aa9.27□□□□□ -0.93
VBP1-203ENST00000535916 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
VBP1-203ENST00000535916 TMC1Q8TDI8 760 aa9.27□□□□□ -0.93
VBP1-203ENST00000535916 GATA6Q92908 595 aa9.27□□□□□ -0.93
VBP1-203ENST00000535916 CCDC74AQ96AQ1 378 aa9.27□□□□□ -0.93
VBP1-203ENST00000535916 METTL22Q9BUU2 404 aaPredicted RBP9.27□□□□□ -0.93
VBP1-203ENST00000535916 RAD18Q9NS91 495 aa9.27□□□□□ -0.93
VBP1-203ENST00000535916 FAM105AQ9NUU6 356 aa9.27□□□□□ -0.93
VBP1-203ENST00000535916 AP4E1Q9UPM8 1137 aa9.27□□□□□ -0.93
VBP1-203ENST00000535916 ARID1BQ8NFD5 2236 aaPredicted RBP9.27□□□□□ -0.93
VBP1-203ENST00000535916 FAM170BA6NMN3 283 aa9.26□□□□□ -0.93
VBP1-203ENST00000535916 DDX54Q8TDD1 881 aaKnown RBP9.26□□□□□ -0.93
VBP1-203ENST00000535916 SEMA6CQ9H3T2 930 aa9.26□□□□□ -0.93
VBP1-203ENST00000535916 GADD45BO75293 160 aaPredicted RBP9.25□□□□□ -0.93
VBP1-203ENST00000535916 PRPF40BQ6NWY9 871 aaKnown RBP9.25□□□□□ -0.93
VBP1-203ENST00000535916 KRTAP4-2Q9BYR5 136 aa9.25□□□□□ -0.93
VBP1-203ENST00000535916 DNAJC25Q9H1X3 360 aa9.25□□□□□ -0.93
VBP1-203ENST00000535916 ACSS3Q9H6R3 686 aa9.25□□□□□ -0.93
VBP1-203ENST00000535916 ZFYVE1Q9HBF4 777 aa9.25□□□□□ -0.93
VBP1-203ENST00000535916 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.24□□□□□ -0.93
VBP1-203ENST00000535916 AOC2O75106 756 aa9.24□□□□□ -0.93
VBP1-203ENST00000535916 PTPN12Q05209 780 aaKnown RBP9.24□□□□□ -0.93
VBP1-203ENST00000535916 MAP7Q14244 749 aa9.24□□□□□ -0.93
VBP1-203ENST00000535916 PDE3AQ14432 1141 aa9.24□□□□□ -0.93
VBP1-203ENST00000535916 WDR18Q9BV38 432 aa9.24□□□□□ -0.93
VBP1-203ENST00000535916 ANGEL1Q9UNK9 670 aaKnown RBP9.24□□□□□ -0.93
VBP1-203ENST00000535916 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
VBP1-203ENST00000535916 CYP26A1O43174 497 aa9.23□□□□□ -0.93
VBP1-203ENST00000535916 ASPAP45381 313 aa9.23□□□□□ -0.93
VBP1-203ENST00000535916 ZNF157P51786 506 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms