RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RAD21O60216 631 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 MMP20O60882 483 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 C6P13671 934 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 SOX18P35713 384 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 AFMP43652 599 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 LARP1Q6PKG0 1096 aaKnown RBP2.26□□□□□ -2.05
COPB1-212ENST00000534771 RGL4Q8IZJ4 473 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 SPACA7Q96KW9 195 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 NSUN5Q96P11 429 aaKnown RBP2.26□□□□□ -2.05
COPB1-212ENST00000534771 BDH2Q9BUT1 245 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 C11orf21Q9P2W6 132 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 TRIM33Q9UPN9 1127 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 FAM177BA6PVY3 158 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 POM121CA8CG34 1229 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 LGR5O75473 907 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 CDC27P30260 824 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 CEP135Q66GS9 1140 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 FDX2Q6P4F2 183 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 ZNF765Q7L2R6 523 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 NLRP13Q86W25 1043 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 KLHL23Q8NBE8 558 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 ADAMTS19Q8TE59 1207 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 UBASH3BQ8TF42 649 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 VTI1AQ96AJ9 217 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 UCN2Q96RP3 112 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 LACRTQ9GZZ8 138 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 ADAM7Q9H2U9 754 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 QTRT2Q9H974 415 aaKnown RBP2.25□□□□□ -2.05
COPB1-212ENST00000534771 TFIP11Q9UBB9 837 aaKnown RBP2.25□□□□□ -2.05
COPB1-212ENST00000534771 KCNMB2Q9Y691 235 aa2.25□□□□□ -2.05
COPB1-212ENST00000534771 FSCN2O14926 492 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 FOXO3O43524 673 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 SMNDC1O75940 238 aaKnown RBP eCLIP2.24□□□□□ -2.05
COPB1-212ENST00000534771 AMHP03971 560 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 CDC25BP30305 580 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 PTK7Q13308 1070 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 SWI5Q1ZZU3 235 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 SLC23A3Q6PIS1 610 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 TXNDC11Q6PKC3 985 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 TREML1Q86YW5 311 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 FBLIM1Q8WUP2 373 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 KLHDC7BQ96G42 594 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 MYO19Q96H55 970 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 POM121Q96HA1 1249 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 KIRREL1Q96J84 757 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 EPB41L4BQ9H329 900 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 PRKAG2Q9UGJ0 569 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 LRFN2Q9ULH4 789 aa2.24□□□□□ -2.05
COPB1-212ENST00000534771 TM4SF5O14894 197 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 WEE1P30291 646 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 ACVRL1P37023 503 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 SCNN1AP37088 669 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 DPYDQ12882 1025 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 HYAL2Q12891 473 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 TTC39BQ5VTQ0 682 aaPredicted RBP2.23□□□□□ -2.05
COPB1-212ENST00000534771 LRCH2Q5VUJ6 765 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 CDCP2Q5VXM1 449 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 ANKMY2Q8IV38 441 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 BAHD1Q8TBE0 780 aaPredicted RBP2.23□□□□□ -2.05
COPB1-212ENST00000534771 GATA6Q92908 595 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 CARD10Q9BWT7 1032 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 RNF208Q9H0X6 261 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 VRTNQ9H8Y1 702 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 SEC31BQ9NQW1 1179 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 CTNND2Q9UQB3 1225 aa2.23□□□□□ -2.05
COPB1-212ENST00000534771 UBAP1LF5GYI3 381 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 BRD2P25440 801 aaKnown RBP2.22□□□□□ -2.05
COPB1-212ENST00000534771 ATP11AP98196 1134 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 CYP27A1Q02318 531 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 COX20Q5RI15 118 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 KANK4Q5T7N3 995 aaPredicted RBP2.22□□□□□ -2.05
COPB1-212ENST00000534771 COL13A1Q5TAT6 717 aaPredicted RBP2.22□□□□□ -2.05
COPB1-212ENST00000534771 C12orf50Q8NA57 414 aaPredicted RBP2.22□□□□□ -2.05
COPB1-212ENST00000534771 OR13H1Q8NG92 308 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 FOXD4L4Q8WXT5 416 aaPredicted RBP2.22□□□□□ -2.05
COPB1-212ENST00000534771 PIK3R5Q8WYR1 880 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 WNT8BQ93098 351 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 TEPSINQ96N21 525 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 RASSF4Q9H2L5 321 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 OSGEPQ9NPF4 335 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 SH2B1Q9NRF2 756 aaPredicted RBP2.22□□□□□ -2.05
COPB1-212ENST00000534771 SEMA3GQ9NS98 782 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 FAM13BQ9NYF5 915 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 VAV3Q9UKW4 847 aa2.22□□□□□ -2.05
COPB1-212ENST00000534771 FNDC3AQ9Y2H6 1198 aaKnown RBP2.22□□□□□ -2.05
COPB1-212ENST00000534771 MAFBQ9Y5Q3 323 aaPredicted RBP2.22□□□□□ -2.05
COPB1-212ENST00000534771 FAM196BA6NMK8 535 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 ADAM11O75078 769 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 UBTFP17480 764 aaKnown RBP2.21□□□□□ -2.06
COPB1-212ENST00000534771 PTPRAP18433 802 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 EPHA1P21709 976 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 ARL4DP49703 201 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 USP11P51784 963 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 CABP4P57796 275 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 PIP4K2BP78356 416 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 ZNF827Q17R98 1081 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 NUTM2GQ5VZR2 741 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 NCAPG2Q86XI2 1143 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 ETFBKMTQ8IXQ9 262 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 PLD6Q8N2A8 252 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms