RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 RTKN2Q8IZC4 609 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 SPATA5Q8NB90 893 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 TMEM87BQ96K49 555 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 CGNQ9P2M7 1197 aaKnown RBP12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.35
AMBRA1-211ENST00000533727 KIF22Q14807 665 aa12.9□□□□□ -0.35
AMBRA1-211ENST00000533727 UBA5Q9GZZ9 404 aa12.9□□□□□ -0.35
AMBRA1-211ENST00000533727 ZBED4O75132 1171 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 IBSPP21815 317 aaPredicted RBP12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 CRB1P82279 1406 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 CDC42BPBQ9Y5S2 1711 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 DKC1O60832 514 aaKnown RBP eCLIP12.89□□□□□ -0.354e-8■■■■■ 36.5
AMBRA1-211ENST00000533727 DALRD3Q5D0E6 543 aaKnown RBP12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 ANO10Q9NW15 660 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 ZBTB7BO15156 539 aaPredicted RBP12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 FERMT3Q86UX7 667 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 PLCD4Q9BRC7 762 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 LZTS2Q9BRK4 669 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 ALG1Q9BT22 464 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 GOPCQ9HD26 462 aa12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 INO80Q9ULG1 1556 aaPredicted RBP12.89□□□□□ -0.35
AMBRA1-211ENST00000533727 NPR1P16066 1061 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 FAM114A1Q8IWE2 563 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 USP31Q70CQ4 1352 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 MFSD14BQ5SR56 506 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 DRC1Q96MC2 740 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 ZHX1Q9UKY1 873 aaPredicted RBP12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 TIMM10P62072 90 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 TSHZ3Q63HK5 1081 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 CCDC144CPQ8IYA2 1237 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 UBXN4Q92575 508 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 DHX32Q7L7V1 743 aaKnown RBP12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 CNNM3Q8NE01 707 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 STK24Q9Y6E0 443 aa12.88□□□□□ -0.35
AMBRA1-211ENST00000533727 NEBLO76041 1014 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 GTF2IP78347 998 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 IRX3P78415 501 aaPredicted RBP12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 KBTBD3Q8NAB2 608 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 DDX19AQ9NUU7 478 aaKnown RBP12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 ARPP21Q9UBL0 812 aaPredicted RBP12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 DBNDD2Q9BQY9 259 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 GOLGA6L7A0A1B0GV03 622 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 KIF4AO95239 1232 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 GJB2P29033 226 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 TTLL7Q6ZT98 887 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 SYCP3Q8IZU3 236 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 CROCC2H7BZ55 1655 aa12.87□□□□□ -0.35
AMBRA1-211ENST00000533727 GUCY1B3Q02153 619 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 TMCO3Q6UWJ1 677 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 TAF5LO75529 589 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 KIF2AO00139 706 aaPredicted RBP12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 TTLL6Q8N841 843 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 DLC1Q96QB1 1528 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 STX6O43752 255 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 IGHDP01880 384 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 IDEP14735 1019 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 CCDC174Q6PII3 467 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 PIGBQ92521 554 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 ZNF594Q96JF6 807 aaPredicted RBP12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 USP40Q9NVE5 1235 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 JAG2Q9Y219 1238 aa12.86□□□□□ -0.35
AMBRA1-211ENST00000533727 CIAO1O76071 339 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 ERLIN2O94905 339 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 HSPA1LP34931 641 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 SEPT11Q9NVA2 429 aaKnown RBP12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 CPSF1Q10570 1443 aaKnown RBP12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 ZNF804BA4D1E1 1349 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 SUPT20HL1Q3ZLR7 823 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 Q6ZUG5 572 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 KCNG4Q8TDN1 519 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 FERMT2Q96AC1 680 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 BICD1Q96G01 975 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 MASTLQ96GX5 879 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 GPHNQ9NQX3 736 aaPredicted RBP12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 SETBP1Q9Y6X0 1596 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 GOLGA6L10A6NI86 522 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 ATP5JP18859 108 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 CHURC1Q8WUH1 139 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 ATG3Q9NT62 314 aa12.85□□□□□ -0.35
AMBRA1-211ENST00000533727 DYNC1I1O14576 645 aa12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 TRIM75PA6NK02 468 aa12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 CLCN1P35523 988 aa12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 KRT2P35908 639 aa12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 TMED8Q6PL24 325 aaPredicted RBP12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 GIMAP7Q8NHV1 300 aa12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 SYCE3A1L190 88 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms