RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 TBC1D8O95759 1140 aa16.69■□□□□ 0.26
AMBRA1-210ENST00000531542 IFIT1P09914 478 aaKnown RBP16.69■□□□□ 0.26
AMBRA1-210ENST00000531542 CRKP46108 304 aa16.69■□□□□ 0.26
AMBRA1-210ENST00000531542 IREB2P48200 963 aaKnown RBP16.69■□□□□ 0.26
AMBRA1-210ENST00000531542 ANKRD13AQ8IZ07 590 aa16.69■□□□□ 0.26
AMBRA1-210ENST00000531542 ZNF296Q8WUU4 475 aaPredicted RBP16.69■□□□□ 0.26
AMBRA1-210ENST00000531542 FKBP1CQ5VVH2 108 aa16.68■□□□□ 0.26
AMBRA1-210ENST00000531542 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
AMBRA1-210ENST00000531542 LPIN2Q92539 896 aa16.68■□□□□ 0.26
AMBRA1-210ENST00000531542 WNK4Q96J92 1243 aa16.68■□□□□ 0.26
AMBRA1-210ENST00000531542 TEPSINQ96N21 525 aa16.68■□□□□ 0.26
AMBRA1-210ENST00000531542 TDRD3Q9H7E2 651 aaKnown RBP16.68■□□□□ 0.26
AMBRA1-210ENST00000531542 ECM29Q5VYK3 1845 aa16.68■□□□□ 0.26
AMBRA1-210ENST00000531542 CIAO1O76071 339 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 TNNI2P48788 182 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 BCAMP50895 628 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 ATG9AQ7Z3C6 839 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 IFNL1Q8IU54 200 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 ARHGAP45Q92619 1136 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 CLMNQ96JQ2 1002 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 ZDHHC15Q96MV8 337 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 API5Q9BZZ5 524 aaKnown RBP16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 FZD1Q9UP38 647 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 MAST3O60307 1309 aa16.67■□□□□ 0.26
AMBRA1-210ENST00000531542 TESPA1A2RU30 521 aaPredicted RBP16.66■□□□□ 0.26
AMBRA1-210ENST00000531542 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
AMBRA1-210ENST00000531542 UBTFL1P0CB47 393 aaPredicted RBP16.66■□□□□ 0.26
AMBRA1-210ENST00000531542 MKRN3Q13064 507 aaKnown RBP16.66■□□□□ 0.26
AMBRA1-210ENST00000531542 HHIPL2Q6UWX4 724 aa16.66■□□□□ 0.26
AMBRA1-210ENST00000531542 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
AMBRA1-210ENST00000531542 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
AMBRA1-210ENST00000531542 FKTNO75072 461 aa16.65■□□□□ 0.26
AMBRA1-210ENST00000531542 SLC5A1P13866 664 aa16.65■□□□□ 0.26
AMBRA1-210ENST00000531542 GRIK5Q16478 980 aa16.65■□□□□ 0.26
AMBRA1-210ENST00000531542 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
AMBRA1-210ENST00000531542 WDR66Q8TBY9 1149 aa16.65■□□□□ 0.26
AMBRA1-210ENST00000531542 IQSEC3Q9UPP2 1182 aaPredicted RBP16.65■□□□□ 0.26
AMBRA1-210ENST00000531542 CHAF1AQ13111 956 aaPredicted RBP16.64■□□□□ 0.25
AMBRA1-210ENST00000531542 OTUD7BQ6GQQ9 843 aa16.64■□□□□ 0.25
AMBRA1-210ENST00000531542 APOBEC3HQ6NTF7 200 aaKnown RBP16.64■□□□□ 0.25
AMBRA1-210ENST00000531542 HOOK2Q96ED9 719 aa16.64■□□□□ 0.25
AMBRA1-210ENST00000531542 ARAP2Q8WZ64 1704 aa16.64■□□□□ 0.25
AMBRA1-210ENST00000531542 TCP10L2B9ZVM9 353 aa16.63■□□□□ 0.25
AMBRA1-210ENST00000531542 IGF2BP3O00425 579 aaKnown RBP eCLIP16.63■□□□□ 0.25
AMBRA1-210ENST00000531542 RARSP54136 660 aaKnown RBP16.63■□□□□ 0.25
AMBRA1-210ENST00000531542 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
AMBRA1-210ENST00000531542 FBXO46Q6PJ61 603 aaPredicted RBP16.63■□□□□ 0.25
AMBRA1-210ENST00000531542 TMEM39BQ9GZU3 492 aa16.63■□□□□ 0.25
AMBRA1-210ENST00000531542 R3HDMLQ9H3Y0 253 aa16.63■□□□□ 0.25
AMBRA1-210ENST00000531542 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
AMBRA1-210ENST00000531542 HPS5Q9UPZ3 1129 aa16.63■□□□□ 0.25
AMBRA1-210ENST00000531542 LAMB1P07942 1786 aa16.62■□□□□ 0.25
AMBRA1-210ENST00000531542 SEMA3EO15041 775 aa16.62■□□□□ 0.25
AMBRA1-210ENST00000531542 GJA5P36382 358 aa16.62■□□□□ 0.25
AMBRA1-210ENST00000531542 IL15P40933 162 aaPredicted RBP16.62■□□□□ 0.25
AMBRA1-210ENST00000531542 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
AMBRA1-210ENST00000531542 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.62■□□□□ 0.25
AMBRA1-210ENST00000531542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.62■□□□□ 0.25
AMBRA1-210ENST00000531542 TMOD2Q9NZR1 351 aa16.62■□□□□ 0.25
AMBRA1-210ENST00000531542 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
AMBRA1-210ENST00000531542 OPTNQ96CV9 577 aa16.61■□□□□ 0.25
AMBRA1-210ENST00000531542 MS4A4AQ96JQ5 239 aa16.61■□□□□ 0.25
AMBRA1-210ENST00000531542 GNL3LQ9NVN8 582 aaKnown RBP16.61■□□□□ 0.25
AMBRA1-210ENST00000531542 SALL1Q9NSC2 1324 aa16.61■□□□□ 0.25
AMBRA1-210ENST00000531542 RPAP1Q9BWH6 1393 aaPredicted RBP16.61■□□□□ 0.25
AMBRA1-210ENST00000531542 MTX1Q13505 466 aa16.6■□□□□ 0.25
AMBRA1-210ENST00000531542 VGLL4Q14135 290 aa16.6■□□□□ 0.25
AMBRA1-210ENST00000531542 ATP2B3Q16720 1220 aa16.6■□□□□ 0.25
AMBRA1-210ENST00000531542 CDAN1Q8IWY9 1227 aa16.6■□□□□ 0.25
AMBRA1-210ENST00000531542 PTPN18Q99952 460 aa16.6■□□□□ 0.25
AMBRA1-210ENST00000531542 LRRFIP2Q9Y608 721 aaKnown RBP16.6■□□□□ 0.25
AMBRA1-210ENST00000531542 GNAI3P08754 354 aa16.59■□□□□ 0.25
AMBRA1-210ENST00000531542 GTF2A2P52657 109 aa16.59■□□□□ 0.25
AMBRA1-210ENST00000531542 ELP3Q9H9T3 547 aa16.59■□□□□ 0.25
AMBRA1-210ENST00000531542 CSADQ9Y600 493 aa16.59■□□□□ 0.25
AMBRA1-210ENST00000531542 IPO8O15397 1037 aaKnown RBP16.58■□□□□ 0.24
AMBRA1-210ENST00000531542 MEIS3Q99687 375 aa16.58■□□□□ 0.24
AMBRA1-210ENST00000531542 ZCCHC17Q9NP64 241 aaKnown RBP16.58■□□□□ 0.24
AMBRA1-210ENST00000531542 DENND2AQ9ULE3 1009 aa16.58■□□□□ 0.24
AMBRA1-210ENST00000531542 PDS5AQ29RF7 1337 aaKnown RBP16.58■□□□□ 0.24
AMBRA1-210ENST00000531542 SPDYE5A6NIY4 337 aa16.57■□□□□ 0.24
AMBRA1-210ENST00000531542 CACNB3P54284 484 aa16.57■□□□□ 0.24
AMBRA1-210ENST00000531542 CRHR2Q13324 411 aa16.57■□□□□ 0.24
AMBRA1-210ENST00000531542 DCAF15Q66K64 600 aa16.57■□□□□ 0.24
AMBRA1-210ENST00000531542 FAM151AQ8WW52 585 aa16.57■□□□□ 0.24
AMBRA1-210ENST00000531542 ERO1AQ96HE7 468 aa16.57■□□□□ 0.24
AMBRA1-210ENST00000531542 SIL1Q9H173 461 aa16.57■□□□□ 0.24
AMBRA1-210ENST00000531542 SOX10P56693 466 aa16.56■□□□□ 0.24
AMBRA1-210ENST00000531542 OTOP1Q7RTM1 612 aa16.56■□□□□ 0.24
AMBRA1-210ENST00000531542 ERO1BQ86YB8 467 aa16.56■□□□□ 0.24
AMBRA1-210ENST00000531542 BRI3BPQ8WY22 251 aa16.56■□□□□ 0.24
AMBRA1-210ENST00000531542 DAGLAQ9Y4D2 1042 aa16.56■□□□□ 0.24
AMBRA1-210ENST00000531542 LDHBP07195 334 aaKnown RBP16.55■□□□□ 0.24
AMBRA1-210ENST00000531542 PRDX5P30044 214 aa16.55■□□□□ 0.24
AMBRA1-210ENST00000531542 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
AMBRA1-210ENST00000531542 CDC42EP5Q6NZY7 148 aa16.55■□□□□ 0.24
AMBRA1-210ENST00000531542 ZGPATQ8N5A5 531 aaKnown RBP16.55■□□□□ 0.24
AMBRA1-210ENST00000531542 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
AMBRA1-210ENST00000531542 PA2G4Q9UQ80 394 aaKnown RBP16.55■□□□□ 0.24
AMBRA1-210ENST00000531542 AKAP2Q9Y2D5 859 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms