RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 ZNF70Q9UC06 446 aaPredicted RBP13.43□□□□□ -0.26
SIPA1-204ENST00000528699 OTOFQ9HC10 1997 aa13.43□□□□□ -0.26
SIPA1-204ENST00000528699 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
SIPA1-204ENST00000528699 SLC5A1P13866 664 aa13.42□□□□□ -0.26
SIPA1-204ENST00000528699 TNFAIP1Q13829 316 aa13.42□□□□□ -0.26
SIPA1-204ENST00000528699 RASA3Q14644 834 aa13.42□□□□□ -0.26
SIPA1-204ENST00000528699 NBPF12Q5TAG4 269 aaPredicted RBP13.42□□□□□ -0.26
SIPA1-204ENST00000528699 ATF7IPQ6VMQ6 1270 aa13.42□□□□□ -0.26
SIPA1-204ENST00000528699 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
SIPA1-204ENST00000528699 SIL1Q9H173 461 aa13.42□□□□□ -0.26
SIPA1-204ENST00000528699 TDRD3Q9H7E2 651 aaKnown RBP13.42□□□□□ -0.26
SIPA1-204ENST00000528699 COPRSQ9NQ92 184 aa13.42□□□□□ -0.26
SIPA1-204ENST00000528699 HDAC5Q9UQL6 1122 aa13.42□□□□□ -0.26
SIPA1-204ENST00000528699 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
SIPA1-204ENST00000528699 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
SIPA1-204ENST00000528699 IL15P40933 162 aaPredicted RBP13.41□□□□□ -0.26
SIPA1-204ENST00000528699 TM4SF4P48230 202 aa13.41□□□□□ -0.26
SIPA1-204ENST00000528699 MTX1Q13505 466 aa13.41□□□□□ -0.26
SIPA1-204ENST00000528699 ATP2B3Q16720 1220 aa13.41□□□□□ -0.26
SIPA1-204ENST00000528699 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
SIPA1-204ENST00000528699 SPRYD7Q5W111 196 aa13.41□□□□□ -0.26
SIPA1-204ENST00000528699 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
SIPA1-204ENST00000528699 TEPSINQ96N21 525 aa13.41□□□□□ -0.26
SIPA1-204ENST00000528699 MRIQ9BWK5 157 aa13.41□□□□□ -0.26
SIPA1-204ENST00000528699 PA2G4Q9UQ80 394 aaKnown RBP13.41□□□□□ -0.26
SIPA1-204ENST00000528699 SUGT1Q9Y2Z0 365 aa13.41□□□□□ -0.26
SIPA1-204ENST00000528699 ZBTB22O15209 634 aa13.4□□□□□ -0.26
SIPA1-204ENST00000528699 IPO8O15397 1037 aaKnown RBP13.4□□□□□ -0.26
SIPA1-204ENST00000528699 GNAI3P08754 354 aa13.4□□□□□ -0.26
SIPA1-204ENST00000528699 MKRN3Q13064 507 aaKnown RBP13.4□□□□□ -0.26
SIPA1-204ENST00000528699 TEKT1Q969V4 418 aa13.4□□□□□ -0.26
SIPA1-204ENST00000528699 CLMNQ96JQ2 1002 aa13.4□□□□□ -0.26
SIPA1-204ENST00000528699 MAST3O60307 1309 aa13.39□□□□□ -0.27
SIPA1-204ENST00000528699 USP2O75604 605 aaPredicted RBP13.39□□□□□ -0.27
SIPA1-204ENST00000528699 ZBTB48P10074 688 aaPredicted RBP13.39□□□□□ -0.27
SIPA1-204ENST00000528699 IREB2P48200 963 aaKnown RBP13.39□□□□□ -0.27
SIPA1-204ENST00000528699 SREBF2Q12772 1141 aa13.39□□□□□ -0.27
SIPA1-204ENST00000528699 DGKZQ13574 1117 aa13.39□□□□□ -0.27
SIPA1-204ENST00000528699 ZDHHC15Q96MV8 337 aa13.39□□□□□ -0.27
SIPA1-204ENST00000528699 CFHR5Q9BXR6 569 aa13.39□□□□□ -0.27
SIPA1-204ENST00000528699 CEP126Q9P2H0 1117 aa13.39□□□□□ -0.27
SIPA1-204ENST00000528699 TCP10L2B9ZVM9 353 aa13.38□□□□□ -0.27
SIPA1-204ENST00000528699 SRGAP3O43295 1099 aa13.38□□□□□ -0.27
SIPA1-204ENST00000528699 ZKSCAN2Q63HK3 967 aa13.38□□□□□ -0.27
SIPA1-204ENST00000528699 APOBEC3HQ6NTF7 200 aaKnown RBP13.38□□□□□ -0.27
SIPA1-204ENST00000528699 HHIPL2Q6UWX4 724 aa13.38□□□□□ -0.27
SIPA1-204ENST00000528699 WDR66Q8TBY9 1149 aa13.38□□□□□ -0.27
SIPA1-204ENST00000528699 FRAT1Q92837 279 aaPredicted RBP13.38□□□□□ -0.27
SIPA1-204ENST00000528699 WNK4Q96J92 1243 aa13.38□□□□□ -0.27
SIPA1-204ENST00000528699 TMEM39BQ9GZU3 492 aa13.38□□□□□ -0.27
SIPA1-204ENST00000528699 SALL1Q9NSC2 1324 aa13.38□□□□□ -0.27
SIPA1-204ENST00000528699 RPAP1Q9BWH6 1393 aaPredicted RBP13.37□□□□□ -0.27
SIPA1-204ENST00000528699 SEMA3EO15041 775 aa13.37□□□□□ -0.27
SIPA1-204ENST00000528699 RLBP1P12271 317 aa13.37□□□□□ -0.27
SIPA1-204ENST00000528699 TNNI2P48788 182 aa13.37□□□□□ -0.27
SIPA1-204ENST00000528699 CACNB3P54284 484 aa13.37□□□□□ -0.27
SIPA1-204ENST00000528699 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
SIPA1-204ENST00000528699 FKBP1CQ5VVH2 108 aa13.37□□□□□ -0.27
SIPA1-204ENST00000528699 ANKRD13AQ8IZ07 590 aa13.37□□□□□ -0.27
SIPA1-204ENST00000528699 TMEM57Q8N5G2 664 aa13.37□□□□□ -0.27
SIPA1-204ENST00000528699 CLUAP1Q96AJ1 413 aa13.37□□□□□ -0.27
SIPA1-204ENST00000528699 SLC10A4Q96EP9 437 aa13.37□□□□□ -0.27
SIPA1-204ENST00000528699 MANSC4A6NHS7 340 aaPredicted RBP13.36□□□□□ -0.27
SIPA1-204ENST00000528699 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
SIPA1-204ENST00000528699 ADORA1P30542 326 aa13.36□□□□□ -0.27
SIPA1-204ENST00000528699 GJA5P36382 358 aa13.36□□□□□ -0.27
SIPA1-204ENST00000528699 PHKA1P46020 1223 aa13.36□□□□□ -0.27
SIPA1-204ENST00000528699 FAM83AQ86UY5 434 aa13.36□□□□□ -0.27
SIPA1-204ENST00000528699 GNL3LQ9NVN8 582 aaKnown RBP13.36□□□□□ -0.27
SIPA1-204ENST00000528699 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
SIPA1-204ENST00000528699 CCDC85CA6NKD9 419 aa13.35□□□□□ -0.27
SIPA1-204ENST00000528699 GNAI2P04899 355 aa13.35□□□□□ -0.27
SIPA1-204ENST00000528699 PRDX5P30044 214 aa13.35□□□□□ -0.27
SIPA1-204ENST00000528699 INHBEP58166 350 aa13.35□□□□□ -0.27
SIPA1-204ENST00000528699 DIXDC1Q155Q3 683 aa13.35□□□□□ -0.27
SIPA1-204ENST00000528699 CCDC102BQ68D86 513 aa13.35□□□□□ -0.27
SIPA1-204ENST00000528699 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.35□□□□□ -0.27
SIPA1-204ENST00000528699 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
SIPA1-204ENST00000528699 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.35□□□□□ -0.27
SIPA1-204ENST00000528699 ZNF296Q8WUU4 475 aaPredicted RBP13.35□□□□□ -0.27
SIPA1-204ENST00000528699 TMOD2Q9NZR1 351 aa13.35□□□□□ -0.27
SIPA1-204ENST00000528699 DENND2AQ9ULE3 1009 aa13.35□□□□□ -0.27
SIPA1-204ENST00000528699 DAGLAQ9Y4D2 1042 aa13.35□□□□□ -0.27
SIPA1-204ENST00000528699 PNMA6EA0A0J9YXQ4 647 aa13.34□□□□□ -0.27
SIPA1-204ENST00000528699 GPR25O00155 361 aa13.34□□□□□ -0.27
SIPA1-204ENST00000528699 IGF2BP3O00425 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
SIPA1-204ENST00000528699 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
SIPA1-204ENST00000528699 TFCP2Q12800 502 aa13.34□□□□□ -0.27
SIPA1-204ENST00000528699 RASGRF1Q13972 1273 aa13.34□□□□□ -0.27
SIPA1-204ENST00000528699 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
SIPA1-204ENST00000528699 R3HDMLQ9H3Y0 253 aa13.34□□□□□ -0.27
SIPA1-204ENST00000528699 ELP3Q9H9T3 547 aa13.34□□□□□ -0.27
SIPA1-204ENST00000528699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
SIPA1-204ENST00000528699 A0A1B0GUL7 405 aa13.33□□□□□ -0.28
SIPA1-204ENST00000528699 TESPA1A2RU30 521 aaPredicted RBP13.33□□□□□ -0.28
SIPA1-204ENST00000528699 TIMM10P62072 90 aa13.33□□□□□ -0.28
SIPA1-204ENST00000528699 VGLL4Q14135 290 aa13.33□□□□□ -0.28
SIPA1-204ENST00000528699 OPTNQ96CV9 577 aa13.33□□□□□ -0.28
SIPA1-204ENST00000528699 AKAP2Q9Y2D5 859 aa13.33□□□□□ -0.28
SIPA1-204ENST00000528699 RFX7Q2KHR2 1363 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms