RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-215	ENST00000524111	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	WTAP	Q15007	396 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	HOMER1	Q86YM7	354 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	CYP2D7	A0A087X1C5	515 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	SERPINC1	P01008	464 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	SSRP1	Q08945	709 aa	Known RBP	10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	VSIG10	Q8N0Z9	540 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	NRBP1	Q9UHY1	535 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	CLIC4	Q9Y696	253 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	LTN1	O94822	1766 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	NALCN	Q8IZF0	1738 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	FMN2	Q9NZ56	1722 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	PTPN21	Q16825	1174 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	LRP10	Q7Z4F1	713 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	CIAO1	O76071	339 aa		10.1	□□□□□ -0.79
SREK1-215	ENST00000524111	OFD1	O75665	1012 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	DZIP1	Q86YF9	867 aa	Known RBP	10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	SETDB2	Q96T68	719 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	CLSTN2	Q9H4D0	955 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	ANO10	Q9NW15	660 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	COL15A1	P39059	1388 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	ATP2B2	Q01814	1243 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	REST	Q13127	1097 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	RTN1	Q16799	776 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	UVSSA	Q2YD98	709 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	NAA16	Q6N069	864 aa	Predicted RBP	10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	TBC1D10C	Q8IV04	446 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	JMY	Q8N9B5	988 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	NOL10	Q9BSC4	688 aa	Known RBP	10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	SENP2	Q9HC62	589 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	SRP68	Q9UHB9	627 aa	Known RBP	10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	TOPAZ1	Q8N9V7	1692 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	WTIP	A6NIX2	430 aa	Predicted RBP	10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	CHRND	Q07001	517 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	STX1A	Q16623	288 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	GPR108	Q9NPR9	543 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	RGPD2	P0DJD1	1756 aa		10.09	□□□□□ -0.79
SREK1-215	ENST00000524111	UBE2Q2L	H0YL09	131 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	PDIA4	P13667	645 aa	Known RBP	10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	CFAP100	Q494V2	611 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	KRT40	Q6A162	431 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	CLIC6	Q96NY7	704 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	SLC4A9	Q96Q91	983 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	MRVI1	Q9Y6F6	885 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	SOS2	Q07890	1332 aa	Predicted RBP	10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	SYK	P43405	635 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	OLFM4	Q6UX06	510 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	IFNL3	Q8IZI9	196 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	CNNM3	Q8NE01	707 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	TMX1	Q9H3N1	280 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	XRN1	Q8IZH2	1706 aa	Known RBP	10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	MAGEB6P1	A0A0J9YX57	407 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	TPM2	P07951	284 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	ADD2	P35612	726 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	IL6ST	P40189	918 aa	Predicted RBP	10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	USP5	P45974	858 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	CCAR2	Q8N163	923 aa	Known RBP	10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	LCORL	Q8N3X6	602 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	NLRP3	Q96P20	1036 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	DNAJC5	Q9H3Z4	198 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	PCDHA7	Q9UN72	937 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	RIPOR2	Q9Y4F9	1068 aa		10.08	□□□□□ -0.8
SREK1-215	ENST00000524111	LLPH	Q9BRT6	129 aa	Known RBP	10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	CARMIL3	Q8ND23	1372 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	OVOS2	A0A0G2JMS6	1433 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	NDUFA8	P51970	172 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	FAM160A1	Q05DH4	1040 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	ERFE	Q4G0M1	354 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	MYSM1	Q5VVJ2	828 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	CYB5R4	Q7L1T6	521 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	TMC6	Q7Z403	805 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	PYCARD	Q9ULZ3	195 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	STX8	Q9UNK0	236 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	TSPY2	A6NKD2	308 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111		F8W031	263 aa	Predicted RBP	10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	CTDNEP1	O95476	244 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	XBP1	P17861	261 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	RFC4	P35249	363 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	AFM	P43652	599 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	DYNLL1	P63167	89 aa	Known RBP	10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	USPL1	Q5W0Q7	1092 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	IQCA1	Q86XH1	822 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	ZNF274	Q96GC6	653 aa	Predicted RBP	10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	FAM47A	Q5JRC9	791 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	ANO1	Q5XXA6	986 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	FBXO18	Q8NFZ0	1043 aa		10.07	□□□□□ -0.8
SREK1-215	ENST00000524111	BTBD18	B2RXH4	712 aa		10.06	□□□□□ -0.8
SREK1-215	ENST00000524111	DHX8	Q14562	1220 aa	Known RBP	10.06	□□□□□ -0.8
SREK1-215	ENST00000524111	APOA5	Q6Q788	366 aa		10.06	□□□□□ -0.8
SREK1-215	ENST00000524111	KCNG4	Q8TDN1	519 aa		10.06	□□□□□ -0.8
SREK1-215	ENST00000524111	GPR101	Q96P66	508 aa	Predicted RBP	10.06	□□□□□ -0.8
SREK1-215	ENST00000524111	MKNK2	Q9HBH9	465 aa		10.06	□□□□□ -0.8
SREK1-215	ENST00000524111	VAT1L	Q9HCJ6	419 aa		10.06	□□□□□ -0.8
SREK1-215	ENST00000524111	ZSWIM5	Q9P217	1185 aa		10.06	□□□□□ -0.8
SREK1-215	ENST00000524111	RGPD1	P0DJD0	1748 aa		10.06	□□□□□ -0.8

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