RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 FBXO33Q7Z6M2 555 aa22.39■■□□□ 1.17
VEGFA-222ENST00000520948 DCTPP1Q9H773 170 aa22.39■■□□□ 1.17
VEGFA-222ENST00000520948 GPR108Q9NPR9 543 aa22.39■■□□□ 1.17
VEGFA-222ENST00000520948 SOX10P56693 466 aa22.38■■□□□ 1.17
VEGFA-222ENST00000520948 GTF2IP78347 998 aa22.38■■□□□ 1.17
VEGFA-222ENST00000520948 MKRN3Q13064 507 aaKnown RBP22.38■■□□□ 1.17
VEGFA-222ENST00000520948 ATP2B3Q16720 1220 aa22.38■■□□□ 1.17
VEGFA-222ENST00000520948 HSP90AB4PQ58FF6 505 aa22.38■■□□□ 1.17
VEGFA-222ENST00000520948 TTLL5Q6EMB2 1281 aa22.38■■□□□ 1.17
VEGFA-222ENST00000520948 REM2Q8IYK8 340 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-222ENST00000520948 CD209Q9NNX6 404 aa22.38■■□□□ 1.17
VEGFA-222ENST00000520948 AKAP2Q9Y2D5 859 aa22.38■■□□□ 1.17
VEGFA-222ENST00000520948 IFIT1P09914 478 aaKnown RBP22.37■■□□□ 1.17
VEGFA-222ENST00000520948 IL1R1P14778 569 aa22.37■■□□□ 1.17
VEGFA-222ENST00000520948 TIMM10P62072 90 aa22.37■■□□□ 1.17
VEGFA-222ENST00000520948 PRKG1Q13976 671 aa22.37■■□□□ 1.17
VEGFA-222ENST00000520948 RAB11FIP3O75154 756 aa22.36■■□□□ 1.17
VEGFA-222ENST00000520948 SLC5A1P13866 664 aa22.36■■□□□ 1.17
VEGFA-222ENST00000520948 NF2P35240 595 aa22.36■■□□□ 1.17
VEGFA-222ENST00000520948 GYG1P46976 350 aa22.36■■□□□ 1.17
VEGFA-222ENST00000520948 OS9Q13438 667 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-222ENST00000520948 CTU1Q7Z7A3 348 aaKnown RBP22.36■■□□□ 1.17
VEGFA-222ENST00000520948 ERC1Q8IUD2 1116 aa22.36■■□□□ 1.17
VEGFA-222ENST00000520948 RHPN1Q8TCX5 695 aa22.36■■□□□ 1.17
VEGFA-222ENST00000520948 ARAP2Q8WZ64 1704 aa22.36■■□□□ 1.17
VEGFA-222ENST00000520948 A0A1B0GUL7 405 aa22.35■■□□□ 1.17
VEGFA-222ENST00000520948 TBC1D8O95759 1140 aa22.35■■□□□ 1.17
VEGFA-222ENST00000520948 HIBADHP31937 336 aaKnown RBP22.35■■□□□ 1.17
VEGFA-222ENST00000520948 HDAC1Q13547 482 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-222ENST00000520948 ZNF804AQ7Z570 1209 aa22.35■■□□□ 1.17
VEGFA-222ENST00000520948 TDRD7Q8NHU6 1098 aaKnown RBP22.35■■□□□ 1.17
VEGFA-222ENST00000520948 HDAC9Q9UKV0 1011 aa22.35■■□□□ 1.17
VEGFA-222ENST00000520948 ZBTB22O15209 634 aa22.34■■□□□ 1.17
VEGFA-222ENST00000520948 BCAMP50895 628 aa22.34■■□□□ 1.17
VEGFA-222ENST00000520948 TNNI3KQ59H18 835 aa22.34■■□□□ 1.17
VEGFA-222ENST00000520948 APOBEC3FQ8IUX4 373 aaKnown RBP22.34■■□□□ 1.17
VEGFA-222ENST00000520948 FPGT-TNNI3KV9GXZ4 949 aa22.34■■□□□ 1.17
VEGFA-222ENST00000520948 CAVIN4Q5BKX8 364 aa22.33■■□□□ 1.17
VEGFA-222ENST00000520948 KIF1BPQ96EK5 621 aa22.33■■□□□ 1.17
VEGFA-222ENST00000520948 FZD1Q9UP38 647 aa22.33■■□□□ 1.17
VEGFA-222ENST00000520948 ECM29Q5VYK3 1845 aa22.33■■□□□ 1.16
VEGFA-222ENST00000520948 ADORA1P30542 326 aa22.32■■□□□ 1.16
VEGFA-222ENST00000520948 CERS5Q8N5B7 392 aa22.32■■□□□ 1.16
VEGFA-222ENST00000520948 EAF2Q96CJ1 260 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-222ENST00000520948 XAGE2Q96GT9 111 aa22.32■■□□□ 1.16
VEGFA-222ENST00000520948 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-222ENST00000520948 TNRC18O15417 2968 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-222ENST00000520948 F8W031 263 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-222ENST00000520948 SLC34A2O95436 690 aa22.31■■□□□ 1.16
VEGFA-222ENST00000520948 ARMC9Q7Z3E5 817 aa22.31■■□□□ 1.16
VEGFA-222ENST00000520948 ZNF296Q8WUU4 475 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-222ENST00000520948 ZBED3Q96IU2 234 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-222ENST00000520948 PCDHAC2Q9Y5I4 1007 aa22.31■■□□□ 1.16
VEGFA-222ENST00000520948 IGHDP01880 384 aa22.3■■□□□ 1.16
VEGFA-222ENST00000520948 DLGAP5Q15398 846 aa22.3■■□□□ 1.16
VEGFA-222ENST00000520948 NEUROD6Q96NK8 337 aa22.3■■□□□ 1.16
VEGFA-222ENST00000520948 ANGEL1Q9UNK9 670 aaKnown RBP22.3■■□□□ 1.16
VEGFA-222ENST00000520948 JAG2Q9Y219 1238 aa22.3■■□□□ 1.16
VEGFA-222ENST00000520948 TM4SF4P48230 202 aa22.29■■□□□ 1.16
VEGFA-222ENST00000520948 MMP14P50281 582 aa22.29■■□□□ 1.16
VEGFA-222ENST00000520948 CCDC102BQ68D86 513 aa22.29■■□□□ 1.16
VEGFA-222ENST00000520948 HPS5Q9UPZ3 1129 aa22.29■■□□□ 1.16
VEGFA-222ENST00000520948 FAM205AQ6ZU69 1335 aa22.29■■□□□ 1.16
VEGFA-222ENST00000520948 PHKA1P46020 1223 aa22.28■■□□□ 1.16
VEGFA-222ENST00000520948 VPS37DQ86XT2 251 aa22.28■■□□□ 1.16
VEGFA-222ENST00000520948 LRRCC1Q9C099 1032 aa22.28■■□□□ 1.16
VEGFA-222ENST00000520948 DEFB129Q9H1M3 183 aa22.28■■□□□ 1.16
VEGFA-222ENST00000520948 RWDD1Q9H446 243 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-222ENST00000520948 IL1RAPL2Q9NP60 686 aa22.28■■□□□ 1.16
VEGFA-222ENST00000520948 COL1A1P02452 1464 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-222ENST00000520948 CLRN2A0PK11 232 aa22.27■■□□□ 1.16
VEGFA-222ENST00000520948 SSC5DA1L4H1 1573 aa22.27■■□□□ 1.16
VEGFA-222ENST00000520948 APBB1O00213 710 aa22.27■■□□□ 1.16
VEGFA-222ENST00000520948 SREBF2Q12772 1141 aa22.27■■□□□ 1.16
VEGFA-222ENST00000520948 DBNDD2Q9BQY9 259 aa22.27■■□□□ 1.16
VEGFA-222ENST00000520948 CCDC8Q9H0W5 538 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-222ENST00000520948 GPR25O00155 361 aa22.26■■□□□ 1.15
VEGFA-222ENST00000520948 FKBP1AP62942 108 aaKnown RBP22.26■■□□□ 1.15
VEGFA-222ENST00000520948 LDLRAD1Q5T700 205 aa22.26■■□□□ 1.15
VEGFA-222ENST00000520948 SMC5Q8IY18 1101 aa22.26■■□□□ 1.15
VEGFA-222ENST00000520948 CLASRPQ8N2M8 674 aaKnown RBP22.26■■□□□ 1.15
VEGFA-222ENST00000520948 GCC1Q96CN9 775 aa22.26■■□□□ 1.15
VEGFA-222ENST00000520948 R3HDMLQ9H3Y0 253 aa22.26■■□□□ 1.15
VEGFA-222ENST00000520948 DBNLQ9UJU6 430 aaKnown RBP22.26■■□□□ 1.15
VEGFA-222ENST00000520948 IQSEC3Q9UPP2 1182 aaPredicted RBP22.26■■□□□ 1.15
VEGFA-222ENST00000520948 CFAP100Q494V2 611 aa22.25■■□□□ 1.15
VEGFA-222ENST00000520948 SPRYD7Q5W111 196 aa22.25■■□□□ 1.15
VEGFA-222ENST00000520948 AACSQ86V21 672 aa22.25■■□□□ 1.15
VEGFA-222ENST00000520948 TLR7Q9NYK1 1049 aaKnown RBP22.25■■□□□ 1.15
VEGFA-222ENST00000520948 AOX1Q06278 1338 aa22.25■■□□□ 1.15
VEGFA-222ENST00000520948 SEMA3EO15041 775 aa22.24■■□□□ 1.15
VEGFA-222ENST00000520948 SMARCA5O60264 1052 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-222ENST00000520948 ARID4AP29374 1257 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-222ENST00000520948 MTMR14Q8NCE2 650 aa22.24■■□□□ 1.15
VEGFA-222ENST00000520948 CLMNQ96JQ2 1002 aa22.24■■□□□ 1.15
VEGFA-222ENST00000520948 ZNF512BQ96KM6 892 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-222ENST00000520948 VEZTQ9HBM0 779 aa22.24■■□□□ 1.15
VEGFA-222ENST00000520948 GNL3LQ9NVN8 582 aaKnown RBP22.24■■□□□ 1.15
VEGFA-222ENST00000520948 PKN2Q16513 984 aaKnown RBP22.23■■□□□ 1.15
VEGFA-222ENST00000520948 PRMT6Q96LA8 375 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms