RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 WDR64B1ANS9 1081 aa8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 EIF1AYO14602 144 aaKnown RBP8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 ADAMTS4O75173 837 aa8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 ITPKAP23677 461 aa8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 SOX4Q06945 474 aaPredicted RBP8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 CDPF1Q6NVV7 123 aa8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 TMC1Q8TDI8 760 aa8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 CCDC74AQ96AQ1 378 aa8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 ZNF576Q9H609 170 aa8.33□□□□□ -1.08
CTHRC1-204ENST00000520880 EIF4EBP3O60516 100 aaPredicted RBP8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 ECEL1O95672 775 aa8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 B3GALT4O96024 378 aa8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 CYP11A1P05108 521 aa8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 SPINK2P20155 84 aa8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 POU4F3Q15319 338 aa8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 INTS5Q6P9B9 1019 aaKnown RBP8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 CCER1Q8TC90 406 aaPredicted RBP8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 ABCB6Q9NP58 842 aa8.32□□□□□ -1.08
CTHRC1-204ENST00000520880 FAM95CA0A1B0GW59 222 aa8.31□□□□□ -1.08
CTHRC1-204ENST00000520880 ADH5P11766 374 aa8.31□□□□□ -1.08
CTHRC1-204ENST00000520880 GRIK1P39086 918 aa8.31□□□□□ -1.08
CTHRC1-204ENST00000520880 USP11P51784 963 aa8.31□□□□□ -1.08
CTHRC1-204ENST00000520880 ERICH6Q7L0X2 663 aa8.31□□□□□ -1.08
CTHRC1-204ENST00000520880 SHISA5Q8N114 240 aa8.31□□□□□ -1.08
CTHRC1-204ENST00000520880 FBXL6Q8N531 539 aa8.31□□□□□ -1.08
CTHRC1-204ENST00000520880 DNAJC25Q9H1X3 360 aa8.31□□□□□ -1.08
CTHRC1-204ENST00000520880 SOWAHDA6NJG2 315 aa8.3□□□□□ -1.08
CTHRC1-204ENST00000520880 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
CTHRC1-204ENST00000520880 F13BP05160 661 aa8.3□□□□□ -1.08
CTHRC1-204ENST00000520880 PDE4CQ08493 712 aa8.3□□□□□ -1.08
CTHRC1-204ENST00000520880 NFKBIBQ15653 356 aa8.3□□□□□ -1.08
CTHRC1-204ENST00000520880 DTX1Q86Y01 620 aa8.3□□□□□ -1.08
CTHRC1-204ENST00000520880 RBCK1Q9BYM8 510 aa8.3□□□□□ -1.08
CTHRC1-204ENST00000520880 HOXA10P31260 410 aaPredicted RBP8.29□□□□□ -1.08
CTHRC1-204ENST00000520880 PRPF40BQ6NWY9 871 aaKnown RBP8.29□□□□□ -1.08
CTHRC1-204ENST00000520880 ALKBH8Q96BT7 664 aaKnown RBP8.29□□□□□ -1.08
CTHRC1-204ENST00000520880 CSRNP1Q96S65 589 aa8.29□□□□□ -1.08
CTHRC1-204ENST00000520880 TIMELESSQ9UNS1 1208 aa8.29□□□□□ -1.08
CTHRC1-204ENST00000520880 ACTL7BQ9Y614 415 aa8.29□□□□□ -1.08
CTHRC1-204ENST00000520880 GADD45BO75293 160 aaPredicted RBP8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 PTPN12Q05209 780 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 PAOXQ6QHF9 649 aa8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 GLIS3Q8NEA6 775 aa8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 EPS8L3Q8TE67 593 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 EZH1Q92800 747 aaPredicted RBP8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 DMRTB1Q96MA1 342 aa8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 CORO1BQ9BR76 489 aa8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 PIM2Q9P1W9 311 aa8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 OAS3Q9Y6K5 1087 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-204ENST00000520880 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
CTHRC1-204ENST00000520880 ADMP35318 185 aa8.27□□□□□ -1.09
CTHRC1-204ENST00000520880 GP2P55259 537 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-204ENST00000520880 GRM2Q14416 872 aa8.27□□□□□ -1.09
CTHRC1-204ENST00000520880 ATG3Q9NT62 314 aa8.27□□□□□ -1.09
CTHRC1-204ENST00000520880 KRTAP9-6A0A140TA67 174 aa8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 FAAP100Q0VG06 881 aa8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 HP1BP3Q5SSJ5 553 aaPredicted RBP8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 MCTP1Q6DN14 999 aa8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 TMC7Q7Z402 723 aa8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 GIMAP7Q8NHV1 300 aa8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 DDX54Q8TDD1 881 aaKnown RBP8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 OSBPL1AQ9BXW6 950 aa8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 RAD18Q9NS91 495 aa8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 FAM105AQ9NUU6 356 aa8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 PRKAG2Q9UGJ0 569 aa8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 GNEQ9Y223 722 aaKnown RBP8.26□□□□□ -1.09
CTHRC1-204ENST00000520880 RAB6AP20340 208 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 ZNF157P51786 506 aaPredicted RBP8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 PI16Q6UXB8 463 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 DYMQ7RTS9 669 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 GATA6Q92908 595 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 TBC1D32Q96NH3 1257 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 YIPF2Q9BWQ6 316 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 ZFYVE1Q9HBF4 777 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 AP4E1Q9UPM8 1137 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 TRAK1Q9UPV9 953 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 LEMD3Q9Y2U8 911 aa8.25□□□□□ -1.09
CTHRC1-204ENST00000520880 AOC2O75106 756 aa8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 NFICP08651 508 aa8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 AP3B2Q13367 1082 aa8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 PDE3AQ14432 1141 aa8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 RPS26P11Q5JNZ5 115 aaPredicted RBP8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 ZAR1Q86SH2 424 aa8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 WDR18Q9BV38 432 aa8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 SEMA6CQ9H3T2 930 aa8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 GSX1Q9H4S2 264 aaPredicted RBP8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 BIN2Q9UBW5 565 aaPredicted RBP8.24□□□□□ -1.09
CTHRC1-204ENST00000520880 FOSL1P15407 271 aa8.23□□□□□ -1.09
CTHRC1-204ENST00000520880 CPSF6Q16630 551 aaKnown RBP eCLIP8.23□□□□□ -1.09
CTHRC1-204ENST00000520880 MSMPQ1L6U9 139 aa8.23□□□□□ -1.09
CTHRC1-204ENST00000520880 ACSS3Q9H6R3 686 aa8.23□□□□□ -1.09
CTHRC1-204ENST00000520880 DCTN4Q9UJW0 460 aa8.23□□□□□ -1.09
CTHRC1-204ENST00000520880 PPP1R9AQ9ULJ8 1098 aa8.23□□□□□ -1.09
CTHRC1-204ENST00000520880 COL17A1Q9UMD9 1497 aaPredicted RBP8.23□□□□□ -1.09
CTHRC1-204ENST00000520880 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.22□□□□□ -1.09
CTHRC1-204ENST00000520880 FAM170BA6NMN3 283 aa8.22□□□□□ -1.09
CTHRC1-204ENST00000520880 BRD1O95696 1058 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms