RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 MAP2K2P36507 400 aa16.22■□□□□ 0.19
CDK7-213ENST00000515391 PHKA1P46020 1223 aa16.22■□□□□ 0.19
CDK7-213ENST00000515391 LBX1P52954 281 aa16.22■□□□□ 0.19
CDK7-213ENST00000515391 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
CDK7-213ENST00000515391 TSKSQ9UJT2 592 aa16.22■□□□□ 0.19
CDK7-213ENST00000515391 COL1A1P02452 1464 aaPredicted RBP16.22■□□□□ 0.19
CDK7-213ENST00000515391 ZBTB7BO15156 539 aaPredicted RBP16.21■□□□□ 0.19
CDK7-213ENST00000515391 MYO1BO43795 1136 aa16.21■□□□□ 0.19
CDK7-213ENST00000515391 HSPA8P11142 646 aaKnown RBP16.21■□□□□ 0.19
CDK7-213ENST00000515391 CTCFP49711 727 aaPredicted RBP16.21■□□□□ 0.19
CDK7-213ENST00000515391 TBC1D22AQ8WUA7 517 aa16.21■□□□□ 0.19
CDK7-213ENST00000515391 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
CDK7-213ENST00000515391 SERPINA10Q9UK55 444 aa16.21■□□□□ 0.19
CDK7-213ENST00000515391 MYH13Q9UKX3 1938 aa16.21■□□□□ 0.19
CDK7-213ENST00000515391 PAPPA2Q9BXP8 1791 aa16.21■□□□□ 0.18
CDK7-213ENST00000515391 NF2P35240 595 aa16.2■□□□□ 0.18
CDK7-213ENST00000515391 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
CDK7-213ENST00000515391 NOGQ13253 232 aa16.2■□□□□ 0.18
CDK7-213ENST00000515391 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
CDK7-213ENST00000515391 A0A1B0GUL7 405 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 SLC10A3P09131 477 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 FKBP1BP68106 108 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 ATP8B2P98198 1209 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 POLA2Q14181 598 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 NBPF12Q5TAG4 269 aaPredicted RBP16.19■□□□□ 0.18
CDK7-213ENST00000515391 CCDC102BQ68D86 513 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 WDR66Q8TBY9 1149 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 CCDC102AQ96A19 550 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 NEUROD6Q96NK8 337 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 BEGAINQ9BUH8 593 aa16.19■□□□□ 0.18
CDK7-213ENST00000515391 TCP10L2B9ZVM9 353 aa16.18■□□□□ 0.18
CDK7-213ENST00000515391 CACNB3P54284 484 aa16.18■□□□□ 0.18
CDK7-213ENST00000515391 G3BP1Q13283 466 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDK7-213ENST00000515391 RASA3Q14644 834 aa16.18■□□□□ 0.18
CDK7-213ENST00000515391 XAGE2Q96GT9 111 aa16.18■□□□□ 0.18
CDK7-213ENST00000515391 GNL3LQ9NVN8 582 aaKnown RBP16.18■□□□□ 0.18
CDK7-213ENST00000515391 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
CDK7-213ENST00000515391 SSC5DA1L4H1 1573 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 PRDX5P30044 214 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 HDLBPQ00341 1268 aaKnown RBP16.17■□□□□ 0.18
CDK7-213ENST00000515391 IFFO2Q5TF58 517 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 ARMC9Q7Z3E5 817 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 TNS4Q8IZW8 715 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 TEKT1Q969V4 418 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 RCAN3Q9UKA8 241 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 AKAP2Q9Y2D5 859 aa16.17■□□□□ 0.18
CDK7-213ENST00000515391 MKRN3Q13064 507 aaKnown RBP16.16■□□□□ 0.18
CDK7-213ENST00000515391 DIXDC1Q155Q3 683 aa16.16■□□□□ 0.18
CDK7-213ENST00000515391 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
CDK7-213ENST00000515391 DENND2AQ9ULE3 1009 aa16.16■□□□□ 0.18
CDK7-213ENST00000515391 PPP2R3BQ9Y5P8 575 aa16.16■□□□□ 0.18
CDK7-213ENST00000515391 SURF6O75683 361 aaKnown RBP16.15■□□□□ 0.18
CDK7-213ENST00000515391 OS9Q13438 667 aaPredicted RBP16.15■□□□□ 0.18
CDK7-213ENST00000515391 RASGRF1Q13972 1273 aa16.15■□□□□ 0.18
CDK7-213ENST00000515391 APOBEC3HQ6NTF7 200 aaKnown RBP16.15■□□□□ 0.18
CDK7-213ENST00000515391 ZDHHC15Q96MV8 337 aa16.15■□□□□ 0.18
CDK7-213ENST00000515391 CSRNP1Q96S65 589 aa16.15■□□□□ 0.18
CDK7-213ENST00000515391 TMEM39BQ9GZU3 492 aa16.15■□□□□ 0.18
CDK7-213ENST00000515391 COG6Q9Y2V7 657 aa16.15■□□□□ 0.18
CDK7-213ENST00000515391 SUGT1Q9Y2Z0 365 aa16.15■□□□□ 0.18
CDK7-213ENST00000515391 SEMA3EO15041 775 aa16.14■□□□□ 0.17
CDK7-213ENST00000515391 USP2O75604 605 aaPredicted RBP16.14■□□□□ 0.17
CDK7-213ENST00000515391 LDLRAD1Q5T700 205 aa16.14■□□□□ 0.17
CDK7-213ENST00000515391 CEP85Q6P2H3 762 aa16.14■□□□□ 0.17
CDK7-213ENST00000515391 HHIPL2Q6UWX4 724 aa16.14■□□□□ 0.17
CDK7-213ENST00000515391 CLMNQ96JQ2 1002 aa16.14■□□□□ 0.17
CDK7-213ENST00000515391 TEPSINQ96N21 525 aa16.14■□□□□ 0.17
CDK7-213ENST00000515391 MRIQ9BWK5 157 aa16.14■□□□□ 0.17
CDK7-213ENST00000515391 MAST3O60307 1309 aa16.14■□□□□ 0.17
CDK7-213ENST00000515391 PCNTO95613 3336 aa16.14■□□□□ 0.17
CDK7-213ENST00000515391 LDHBP07195 334 aaKnown RBP16.13■□□□□ 0.17
CDK7-213ENST00000515391 TNFAIP1Q13829 316 aa16.13■□□□□ 0.17
CDK7-213ENST00000515391 MVPQ14764 893 aaKnown RBP16.13■□□□□ 0.17
CDK7-213ENST00000515391 SUPT20HL1Q3ZLR7 823 aa16.13■□□□□ 0.17
CDK7-213ENST00000515391 GORABQ5T7V8 394 aa16.13■□□□□ 0.17
CDK7-213ENST00000515391 PI16Q6UXB8 463 aa16.13■□□□□ 0.17
CDK7-213ENST00000515391 ABCF2Q9UG63 623 aa16.13■□□□□ 0.17
CDK7-213ENST00000515391 DAGLAQ9Y4D2 1042 aa16.13■□□□□ 0.17
CDK7-213ENST00000515391 PPP1R12BO60237 982 aaPredicted RBP16.12■□□□□ 0.17
CDK7-213ENST00000515391 MS4A1P11836 297 aa16.12■□□□□ 0.17
CDK7-213ENST00000515391 TNNI2P48788 182 aa16.12■□□□□ 0.17
CDK7-213ENST00000515391 MAP3K11Q16584 847 aa16.12■□□□□ 0.17
CDK7-213ENST00000515391 TNNI3KQ59H18 835 aa16.12■□□□□ 0.17
CDK7-213ENST00000515391 C20orf194Q5TEA3 1177 aa16.12■□□□□ 0.17
CDK7-213ENST00000515391 RNF186Q9NXI6 227 aa16.12■□□□□ 0.17
CDK7-213ENST00000515391 HMG20BQ9P0W2 317 aa16.12■□□□□ 0.17
CDK7-213ENST00000515391 FPGT-TNNI3KV9GXZ4 949 aa16.12■□□□□ 0.17
CDK7-213ENST00000515391 SALL1Q9NSC2 1324 aa16.12■□□□□ 0.17
CDK7-213ENST00000515391 TRPA1O75762 1119 aa16.11■□□□□ 0.17
CDK7-213ENST00000515391 CAPN15O75808 1086 aa16.11■□□□□ 0.17
CDK7-213ENST00000515391 CDC42EP5Q6NZY7 148 aa16.11■□□□□ 0.17
CDK7-213ENST00000515391 TBC1D9Q6ZT07 1266 aa16.11■□□□□ 0.17
CDK7-213ENST00000515391 DBNDD2Q9BQY9 259 aa16.11■□□□□ 0.17
CDK7-213ENST00000515391 TMOD2Q9NZR1 351 aa16.11■□□□□ 0.17
CDK7-213ENST00000515391 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
CDK7-213ENST00000515391 SLC10A4Q96EP9 437 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms