RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 CAMK2GQ13555 558 aaPredicted RBP6.83□□□□□ -1.32
NIPBL-207ENST00000513819 SNAP47Q5SQN1 464 aa6.83□□□□□ -1.32
NIPBL-207ENST00000513819 KANK3Q6NY19 840 aa6.83□□□□□ -1.32
NIPBL-207ENST00000513819 FBXL19Q6PCT2 694 aa6.83□□□□□ -1.32
NIPBL-207ENST00000513819 LYPD4Q6UWN0 246 aa6.83□□□□□ -1.32
NIPBL-207ENST00000513819 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
NIPBL-207ENST00000513819 GPRASP2Q96D09 838 aa6.83□□□□□ -1.32
NIPBL-207ENST00000513819 PRKAG2Q9UGJ0 569 aa6.83□□□□□ -1.32
NIPBL-207ENST00000513819 PPME1Q9Y570 386 aa6.83□□□□□ -1.32
NIPBL-207ENST00000513819 BCRP11274 1271 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 AMPD1P23109 780 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 RPS26P62854 115 aaKnown RBP6.82□□□□□ -1.32
NIPBL-207ENST00000513819 GSTM4Q03013 218 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 LMNB2Q03252 620 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 ARID5AQ03989 594 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 WFDC8Q8IUA0 241 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 CACTIN-AS1Q8N1I8 211 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 GOLM1Q8NBJ4 401 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 GRIN3AQ8TCU5 1115 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 WHAMMQ8TF30 809 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 EAF1Q96JC9 268 aaPredicted RBP6.82□□□□□ -1.32
NIPBL-207ENST00000513819 CBX8Q9HC52 389 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 SAMM50Q9Y512 469 aa6.82□□□□□ -1.32
NIPBL-207ENST00000513819 CELA2BP08218 269 aaPredicted RBP6.81□□□□□ -1.32
NIPBL-207ENST00000513819 MSL1Q68DK7 614 aa6.81□□□□□ -1.32
NIPBL-207ENST00000513819 CARD10Q9BWT7 1032 aa6.81□□□□□ -1.32
NIPBL-207ENST00000513819 SUPT16HQ9Y5B9 1047 aaKnown RBP6.81□□□□□ -1.32
NIPBL-207ENST00000513819 FSCN2O14926 492 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 GREM1O60565 184 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 WFS1O76024 890 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 LMNB1P20700 586 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 ARNTP27540 789 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 SEPT6Q14141 434 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 FAM117BQ6P1L5 589 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 MPRIPQ6WCQ1 1025 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 BNC2Q6ZN30 1099 aaPredicted RBP6.8□□□□□ -1.32
NIPBL-207ENST00000513819 VPS37DQ86XT2 251 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 DDX54Q8TDD1 881 aaKnown RBP6.8□□□□□ -1.32
NIPBL-207ENST00000513819 JARID2Q92833 1246 aaPredicted RBP6.8□□□□□ -1.32
NIPBL-207ENST00000513819 GMLQ99445 158 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 ZC3H12CQ9C0D7 883 aaKnown RBP6.8□□□□□ -1.32
NIPBL-207ENST00000513819 KCNQ5Q9NR82 932 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 UBP1Q9NZI7 540 aa6.8□□□□□ -1.32
NIPBL-207ENST00000513819 LOC105371045A0A1W2PR82 267 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 ECEL1O95672 775 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 F13A1P00488 732 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 ATF4P18848 351 aaPredicted RBP6.79□□□□□ -1.32
NIPBL-207ENST00000513819 ATP2B1P20020 1258 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 CRKP46108 304 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 ARL4DP49703 201 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 PIP4K2BP78356 416 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 C19orf57Q0VDD7 668 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 COL9A3Q14050 684 aaPredicted RBP6.79□□□□□ -1.32
NIPBL-207ENST00000513819 LLGL2Q6P1M3 1020 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 TREML4Q6UXN2 200 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 PDZD3Q86UT5 571 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 TRIM42Q8IWZ5 723 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 DMRTC2Q8IXT2 367 aaPredicted RBP6.79□□□□□ -1.32
NIPBL-207ENST00000513819 FBXO27Q8NI29 283 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 RASGRP4Q8TDF6 673 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 DHX38Q92620 1227 aaKnown RBP6.79□□□□□ -1.32
NIPBL-207ENST00000513819 KLHDC7BQ96G42 594 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 NT5C1AQ9BXI3 368 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 EMILIN2Q9BXX0 1053 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 MIR1-1HGQ9H1L0 117 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 SOX17Q9H6I2 414 aaPredicted RBP6.79□□□□□ -1.32
NIPBL-207ENST00000513819 CYP8B1Q9UNU6 501 aa6.79□□□□□ -1.32
NIPBL-207ENST00000513819 TLR3O15455 904 aaKnown RBP6.78□□□□□ -1.32
NIPBL-207ENST00000513819 NID1P14543 1247 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 GTF2F1P35269 517 aaKnown RBP eCLIP6.78□□□□□ -1.32
NIPBL-207ENST00000513819 PTPN11Q06124 597 aaPredicted RBP6.78□□□□□ -1.32
NIPBL-207ENST00000513819 ZNF252P-AS1Q0IIN9 211 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 AP3B2Q13367 1082 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 LRRC14Q15048 493 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 MAP1SQ66K74 1059 aaPredicted RBP6.78□□□□□ -1.32
NIPBL-207ENST00000513819 FAM196AQ6ZSG2 479 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 MCF2L2Q86YR7 1114 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 UBXN4Q92575 508 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 KCNB2Q92953 911 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 GAL3ST3Q96A11 431 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.78□□□□□ -1.32
NIPBL-207ENST00000513819 PRDM6Q9NQX0 595 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 GINM1Q9NU53 330 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 EFR3BQ9Y2G0 817 aa6.78□□□□□ -1.32
NIPBL-207ENST00000513819 GSTP1P09211 210 aaKnown RBP6.77□□□□□ -1.33
NIPBL-207ENST00000513819 FGRP09769 529 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 NASPP49321 788 aaPredicted RBP6.77□□□□□ -1.33
NIPBL-207ENST00000513819 APOBRQ0VD83 1088 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 SETDB1Q15047 1291 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 GALNT11Q8NCW6 608 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 WNT8BQ93098 351 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 NKD1Q969G9 470 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 NRSN2Q9GZP1 204 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 RRAGCQ9HB90 399 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 OSGEPQ9NPF4 335 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 LRRC4BQ9NT99 713 aa6.77□□□□□ -1.33
NIPBL-207ENST00000513819 TM4SF5O14894 197 aa6.76□□□□□ -1.33
NIPBL-207ENST00000513819 DDX3YO15523 660 aaKnown RBP6.76□□□□□ -1.33
NIPBL-207ENST00000513819 CTSBP07858 339 aa6.76□□□□□ -1.33
NIPBL-207ENST00000513819 HOXB4P17483 251 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms