RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 NEK1Q96PY6 1258 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 MCM9Q9NXL9 1143 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 PRKAG2Q9UGJ0 569 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 ABCA9Q8IUA7 1624 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 SYCE3A1L190 88 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 ZFYP08048 801 aaPredicted RBP6.53□□□□□ -1.36
USP38-203ENST00000511739 PDE6BP35913 854 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 AFMP43652 599 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 TERF1P54274 439 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 WDR44Q5JSH3 913 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 CCDC183Q5T5S1 534 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 DPY19L2Q6NUT2 758 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 TMC6Q7Z403 805 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 DZIP3Q86Y13 1208 aaKnown RBP6.53□□□□□ -1.36
USP38-203ENST00000511739 LDHBP07195 334 aaKnown RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 BAG6P46379 1132 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 INF2Q27J81 1249 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 TTC6Q86TZ1 520 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 LARGE2Q8N3Y3 721 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 PDCL2Q8N4E4 241 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 ANKRD2Q9GZV1 360 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 NBPF3Q9H094 633 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 FAM107BQ9H098 131 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 POLKQ9UBT6 870 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 SPHKAPQ2M3C7 1700 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 E7EVH7 732 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 PSMA7O14818 248 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 NOL3O60936 208 aaKnown RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 RBM25P49756 843 aaKnown RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 NSRP1Q9H0G5 558 aaKnown RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 FAM204AQ9H8W3 233 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 KLF18A0A0U1RQI7 1052 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 HSF2BPO75031 334 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 NR1I2O75469 434 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 VIMP08670 466 aaKnown RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 CCT6AP40227 531 aaKnown RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 FLIIQ13045 1269 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 TRPC3Q13507 836 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 NAP1L3Q99457 506 aaPredicted RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 CCDC160A6NGH7 325 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 IRX3P78415 501 aaPredicted RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 BMP2KLQ5H9B9 411 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 RPUSD2Q8IZ73 545 aaKnown RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 GRPEL1Q9HAV7 217 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 ARHGEF10LQ9HCE6 1279 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 DDX19AQ9NUU7 478 aaKnown RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 PPFIA3O75145 1194 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 CNGA1P29973 690 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 ALDH3A1P30838 453 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 IFT74Q96LB3 600 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 AZI2Q9H6S1 392 aa6.52□□□□□ -1.37
USP38-203ENST00000511739 TRMT1Q9NXH9 659 aaKnown RBP6.52□□□□□ -1.37
USP38-203ENST00000511739 GNPATO15228 680 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 XRCC6P12956 609 aaKnown RBP eCLIP6.51□□□□□ -1.37
USP38-203ENST00000511739 CALML3P27482 149 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 GSDMDP57764 484 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 PPP1R21Q6ZMI0 780 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 TFIP11Q9UBB9 837 aaKnown RBP6.51□□□□□ -1.37
USP38-203ENST00000511739 MAP3K4Q9Y6R4 1608 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 ERVK-7P63135 1459 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 CFAP65Q6ZU64 1925 aaKnown RBP6.51□□□□□ -1.37
USP38-203ENST00000511739 DKC1O60832 514 aaKnown RBP eCLIP6.51□□□□□ -1.37
USP38-203ENST00000511739 SMTNP53814 917 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 STX1AQ16623 288 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 RIOK1Q9BRS2 568 aaKnown RBP6.51□□□□□ -1.37
USP38-203ENST00000511739 STMN4Q9H169 189 aaPredicted RBP6.51□□□□□ -1.37
USP38-203ENST00000511739 BABAM1Q9NWV8 329 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 AGTPBP1Q9UPW5 1226 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 H0YIN7 160 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 KRT5P13647 590 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 GNA11P29992 359 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 DNM2P50570 870 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 STRN3Q13033 797 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 CDAN1Q8IWY9 1227 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 CCDC65Q8IXS2 484 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 TRIM7Q9C029 511 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 TACC3Q9Y6A5 838 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 FLT4P35916 1363 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 PI4KAP2A4QPH2 592 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 CCDC169A6NNP5 214 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 H7C1D1 291 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 PI4KAP1Q8N8J0 262 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 CNBD1Q8NA66 436 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 NOX5Q96PH1 765 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 ALG1Q9BT22 464 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 HMG20BQ9P0W2 317 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 LMTK2Q8IWU2 1503 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 POLR1AO95602 1720 aaPredicted RBP6.51□□□□□ -1.37
USP38-203ENST00000511739 STK10O94804 968 aaKnown RBP6.51□□□□□ -1.37
USP38-203ENST00000511739 ARID4AP29374 1257 aaPredicted RBP6.51□□□□□ -1.37
USP38-203ENST00000511739 SYKP43405 635 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 TTC14Q96N46 770 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 CTAGE1Q96RT6 745 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 ANO3Q9BYT9 981 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 LMTK3Q96Q04 1460 aa6.51□□□□□ -1.37
USP38-203ENST00000511739 ATP2C2O75185 946 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 SPAG1Q07617 926 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 SLC9C2Q5TAH2 1124 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 RSPH3Q86UC2 560 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 CCDC110Q8TBZ0 833 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms