RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 LOC100289279A0A1B0GTE1 492 aa6.42□□□□□ -1.38
SMARCA5-202ENST00000508573 EDN3P14138 238 aa6.42□□□□□ -1.38
SMARCA5-202ENST00000508573 FOSL1P15407 271 aa6.42□□□□□ -1.38
SMARCA5-202ENST00000508573 ALKBH2Q6NS38 261 aa6.42□□□□□ -1.38
SMARCA5-202ENST00000508573 CDPF1Q6NVV7 123 aa6.42□□□□□ -1.38
SMARCA5-202ENST00000508573 ABI1Q8IZP0 508 aa6.42□□□□□ -1.38
SMARCA5-202ENST00000508573 UBE2Q2Q8WVN8 375 aa6.42□□□□□ -1.38
SMARCA5-202ENST00000508573 POLR3GLQ9BT43 218 aa6.42□□□□□ -1.38
SMARCA5-202ENST00000508573 AMOTL2Q9Y2J4 779 aa6.42□□□□□ -1.38
SMARCA5-202ENST00000508573 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
SMARCA5-202ENST00000508573 TNFRSF21O75509 655 aa6.41□□□□□ -1.38
SMARCA5-202ENST00000508573 ESRRAP11474 423 aaPredicted RBP6.41□□□□□ -1.38
SMARCA5-202ENST00000508573 MTMR3Q13615 1198 aa6.41□□□□□ -1.38
SMARCA5-202ENST00000508573 SUGCTQ9HAC7 445 aa6.41□□□□□ -1.38
SMARCA5-202ENST00000508573 CCDC39Q9UFE4 941 aa6.41□□□□□ -1.38
SMARCA5-202ENST00000508573 FOXD3Q9UJU5 478 aaPredicted RBP6.41□□□□□ -1.38
SMARCA5-202ENST00000508573 CYP26A1O43174 497 aa6.4□□□□□ -1.38
SMARCA5-202ENST00000508573 TIAF1O95411 115 aa6.4□□□□□ -1.38
SMARCA5-202ENST00000508573 SOX4Q06945 474 aaPredicted RBP6.4□□□□□ -1.38
SMARCA5-202ENST00000508573 TP53INP2Q8IXH6 220 aa6.4□□□□□ -1.38
SMARCA5-202ENST00000508573 TBC1D32Q96NH3 1257 aa6.4□□□□□ -1.38
SMARCA5-202ENST00000508573 METTL12A8MUP2 240 aa6.39□□□□□ -1.39
SMARCA5-202ENST00000508573 ADMP35318 185 aa6.39□□□□□ -1.39
SMARCA5-202ENST00000508573 FZD5Q13467 585 aa6.39□□□□□ -1.39
SMARCA5-202ENST00000508573 SOX17Q9H6I2 414 aaPredicted RBP6.39□□□□□ -1.39
SMARCA5-202ENST00000508573 LATS2Q9NRM7 1088 aa6.39□□□□□ -1.39
SMARCA5-202ENST00000508573 POLR3DP05423 398 aaPredicted RBP6.38□□□□□ -1.39
SMARCA5-202ENST00000508573 EHHADHQ08426 723 aa6.38□□□□□ -1.39
SMARCA5-202ENST00000508573 MSMPQ1L6U9 139 aa6.38□□□□□ -1.39
SMARCA5-202ENST00000508573 C2CD4AQ8NCU7 369 aaPredicted RBP6.38□□□□□ -1.39
SMARCA5-202ENST00000508573 SNX29Q8TEQ0 813 aa6.38□□□□□ -1.39
SMARCA5-202ENST00000508573 METTL22Q9BUU2 404 aaPredicted RBP6.38□□□□□ -1.39
SMARCA5-202ENST00000508573 PRKAG2Q9UGJ0 569 aa6.38□□□□□ -1.39
SMARCA5-202ENST00000508573 UNCXA6NJT0 531 aa6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 FAM170BA6NMN3 283 aa6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 PEAR1Q5VY43 1037 aaPredicted RBP6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 DUSP27Q5VZP5 1158 aa6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 FBXL18Q96ME1 805 aa6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 YIPF2Q9BWQ6 316 aa6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 BHLHE41Q9C0J9 482 aaPredicted RBP6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 ZFYVE28Q9HCC9 887 aa6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 RAD18Q9NS91 495 aa6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 IGSF5Q9NSI5 407 aa6.37□□□□□ -1.39
SMARCA5-202ENST00000508573 PPM1GO15355 546 aaPredicted RBP6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 FAM13AO94988 1023 aa6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 NFICP08651 508 aa6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 SSFA2P28290 1259 aa6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 USP5P45974 858 aa6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 CPSF6Q16630 551 aaKnown RBP eCLIP6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 DYMQ7RTS9 669 aa6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 ZAR1Q86SH2 424 aa6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 FAM9AQ8IZU1 332 aaPredicted RBP6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 BSDC1Q9NW68 430 aaPredicted RBP6.36□□□□□ -1.39
SMARCA5-202ENST00000508573 A0A096LPE4 126 aa6.35□□□□□ -1.39
SMARCA5-202ENST00000508573 A0A1W2PPZ6 126 aa6.35□□□□□ -1.39
SMARCA5-202ENST00000508573 PRNPP04156 253 aa6.35□□□□□ -1.39
SMARCA5-202ENST00000508573 MAOBP27338 520 aa6.35□□□□□ -1.39
SMARCA5-202ENST00000508573 ZNF423Q2M1K9 1284 aa6.35□□□□□ -1.39
SMARCA5-202ENST00000508573 VSIG10LQ86VR7 867 aa6.35□□□□□ -1.39
SMARCA5-202ENST00000508573 EZH1Q92800 747 aaPredicted RBP6.35□□□□□ -1.39
SMARCA5-202ENST00000508573 LRRC4CQ9HCJ2 640 aa6.35□□□□□ -1.39
SMARCA5-202ENST00000508573 CCDC87Q9NVE4 849 aa6.35□□□□□ -1.39
SMARCA5-202ENST00000508573 FZD6O60353 706 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 EIF4EBP3O60516 100 aaPredicted RBP6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 NPR3P17342 541 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 RAB6AP20340 208 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 FKBP4Q02790 459 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 PCDH1Q08174 1060 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 POU4F3Q15319 338 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 SPRED3Q2MJR0 410 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 AKAP4Q5JQC9 854 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 NFXL1Q6ZNB6 911 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 ASIC4Q96FT7 647 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 CWC22Q9HCG8 908 aaKnown RBP6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 ANO2Q9NQ90 1003 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 ACTL7BQ9Y614 415 aa6.34□□□□□ -1.39
SMARCA5-202ENST00000508573 ABL1P00519 1130 aa6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 CYP11A1P05108 521 aa6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 CTSBP07858 339 aa6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 ADH5P11766 374 aa6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 MAP7Q14244 749 aa6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 OGFOD2Q6N063 350 aa6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 FLCNQ8NFG4 579 aa6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 CLEC4MQ9H2X3 399 aaPredicted RBP6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 LGR6Q9HBX8 967 aa6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 ZC3H7BQ9UGR2 993 aaKnown RBP6.33□□□□□ -1.4
SMARCA5-202ENST00000508573 A0A1W2PP55 124 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 TMEM88BA6NKF7 163 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 PATL2C9JE40 543 aaKnown RBP6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 PPP1R15AO75807 674 aaPredicted RBP6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 ASPAP45381 313 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 GRIA4P48058 902 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 KCNA1Q09470 495 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 COL19A1Q14993 1142 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 CCDC27Q2M243 656 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 CBLL1Q75N03 491 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 GATA6Q92908 595 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 LIN7BQ9HAP6 207 aa6.32□□□□□ -1.4
SMARCA5-202ENST00000508573 CYP27A1Q02318 531 aa6.31□□□□□ -1.4
SMARCA5-202ENST00000508573 ZNF765Q7L2R6 523 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms