RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 IGF2BP3O00425 579 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPN20-216ENST00000506080 DLGAP5Q15398 846 aa11.81□□□□□ -0.52
PTPN20-216ENST00000506080 ARSIQ5FYB1 569 aa11.81□□□□□ -0.52
PTPN20-216ENST00000506080 KSR2Q6VAB6 950 aa11.81□□□□□ -0.52
PTPN20-216ENST00000506080 CD99L2Q8TCZ2 262 aa11.81□□□□□ -0.52
PTPN20-216ENST00000506080 ZBED3Q96IU2 234 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-216ENST00000506080 WNK4Q96J92 1243 aa11.81□□□□□ -0.52
PTPN20-216ENST00000506080 PCDHAC2Q9Y5I4 1007 aa11.81□□□□□ -0.52
PTPN20-216ENST00000506080 APAF1O14727 1248 aa11.8□□□□□ -0.52
PTPN20-216ENST00000506080 MMP14P50281 582 aa11.8□□□□□ -0.52
PTPN20-216ENST00000506080 INHBEP58166 350 aa11.8□□□□□ -0.52
PTPN20-216ENST00000506080 NEXNQ0ZGT2 675 aa11.8□□□□□ -0.52
PTPN20-216ENST00000506080 INTS3Q68E01 1043 aaKnown RBP11.8□□□□□ -0.52
PTPN20-216ENST00000506080 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
PTPN20-216ENST00000506080 TSPYL6Q8N831 410 aa11.8□□□□□ -0.52
PTPN20-216ENST00000506080 KHSRPQ92945 711 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTPN20-216ENST00000506080 MYH3P11055 1940 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 CLRN2A0PK11 232 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 F8W031 263 aaPredicted RBP11.79□□□□□ -0.52
PTPN20-216ENST00000506080 SNAP23O00161 211 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 ZBTB48P10074 688 aaPredicted RBP11.79□□□□□ -0.52
PTPN20-216ENST00000506080 ITGA6P23229 1130 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 KCNJ4P48050 445 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 DDX10Q13206 875 aaKnown RBP11.79□□□□□ -0.52
PTPN20-216ENST00000506080 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 VARS2Q5ST30 1063 aaKnown RBP11.79□□□□□ -0.52
PTPN20-216ENST00000506080 CERS5Q8N5B7 392 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 ERO1AQ96HE7 468 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 MPHOSPH8Q99549 860 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 ANKRD2Q9GZV1 360 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 CD209Q9NNX6 404 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 PTPN22Q9Y2R2 807 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
PTPN20-216ENST00000506080 COL1A1P02452 1464 aaPredicted RBP11.79□□□□□ -0.52
PTPN20-216ENST00000506080 H7C1W4 665 aa11.78□□□□□ -0.52
PTPN20-216ENST00000506080 PPP1R12BO60237 982 aaPredicted RBP11.78□□□□□ -0.52
PTPN20-216ENST00000506080 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
PTPN20-216ENST00000506080 GJA5P36382 358 aa11.78□□□□□ -0.52
PTPN20-216ENST00000506080 CALD1Q05682 793 aaKnown RBP11.78□□□□□ -0.52
PTPN20-216ENST00000506080 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
PTPN20-216ENST00000506080 VEZTQ9HBM0 779 aa11.78□□□□□ -0.52
PTPN20-216ENST00000506080 CHRNDQ07001 517 aa11.77□□□□□ -0.52
PTPN20-216ENST00000506080 CRHR2Q13324 411 aa11.77□□□□□ -0.52
PTPN20-216ENST00000506080 CFAP100Q494V2 611 aa11.77□□□□□ -0.52
PTPN20-216ENST00000506080 NBPF12Q5TAG4 269 aaPredicted RBP11.77□□□□□ -0.52
PTPN20-216ENST00000506080 G2E3Q7L622 706 aa11.77□□□□□ -0.52
PTPN20-216ENST00000506080 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.52
PTPN20-216ENST00000506080 EFCC1Q9HA90 598 aa11.77□□□□□ -0.52
PTPN20-216ENST00000506080 JAG2Q9Y219 1238 aa11.77□□□□□ -0.52
PTPN20-216ENST00000506080 MKI67P46013 3256 aaKnown RBP11.77□□□□□ -0.53
PTPN20-216ENST00000506080 AOX1Q06278 1338 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 HTTP42858 3142 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 MYO1BO43795 1136 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 TAF5LO75529 589 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 CAP1Q01518 475 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 SUPT20HL1Q3ZLR7 823 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 OTUD7BQ6GQQ9 843 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 MTMR14Q8NCE2 650 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
PTPN20-216ENST00000506080 PRMT6Q96LA8 375 aaPredicted RBP11.77□□□□□ -0.53
PTPN20-216ENST00000506080 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 CHMP4AQ9BY43 222 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 PPP2R3BQ9Y5P8 575 aa11.77□□□□□ -0.53
PTPN20-216ENST00000506080 USP2O75604 605 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-216ENST00000506080 IREB2P48200 963 aaKnown RBP11.76□□□□□ -0.53
PTPN20-216ENST00000506080 RBM5P52756 815 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTPN20-216ENST00000506080 SP3Q02447 781 aa11.76□□□□□ -0.53
PTPN20-216ENST00000506080 GCKRQ14397 625 aa11.76□□□□□ -0.53
PTPN20-216ENST00000506080 ARMC5Q96C12 935 aa11.76□□□□□ -0.53
PTPN20-216ENST00000506080 PTPN18Q99952 460 aa11.76□□□□□ -0.53
PTPN20-216ENST00000506080 PLA2G12BQ9BX93 195 aa11.76□□□□□ -0.53
PTPN20-216ENST00000506080 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
PTPN20-216ENST00000506080 CSF1RP07333 972 aa11.75□□□□□ -0.53
PTPN20-216ENST00000506080 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTPN20-216ENST00000506080 CASP7P55210 303 aa11.75□□□□□ -0.53
PTPN20-216ENST00000506080 RASA3Q14644 834 aa11.75□□□□□ -0.53
PTPN20-216ENST00000506080 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
PTPN20-216ENST00000506080 TMC2Q8TDI7 906 aa11.75□□□□□ -0.53
PTPN20-216ENST00000506080 IRS2Q9Y4H2 1338 aa11.74□□□□□ -0.53
PTPN20-216ENST00000506080 ANKRD18BA2A2Z9 1011 aa11.74□□□□□ -0.53
PTPN20-216ENST00000506080 UNCXA6NJT0 531 aa11.74□□□□□ -0.53
PTPN20-216ENST00000506080 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-216ENST00000506080 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
PTPN20-216ENST00000506080 KIAA0100Q14667 2235 aaKnown RBP11.74□□□□□ -0.53
PTPN20-216ENST00000506080 CENPFP49454 3210 aa11.73□□□□□ -0.53
PTPN20-216ENST00000506080 ECM29Q5VYK3 1845 aa11.73□□□□□ -0.53
PTPN20-216ENST00000506080 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-216ENST00000506080 PLIN1O60240 522 aa11.73□□□□□ -0.53
PTPN20-216ENST00000506080 IL1R1P14778 569 aa11.73□□□□□ -0.53
PTPN20-216ENST00000506080 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-216ENST00000506080 C15orf52Q6ZUT6 534 aaKnown RBP11.73□□□□□ -0.53
PTPN20-216ENST00000506080 ZNF804AQ7Z570 1209 aa11.73□□□□□ -0.53
PTPN20-216ENST00000506080 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
PTPN20-216ENST00000506080 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
PTPN20-216ENST00000506080 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
PTPN20-216ENST00000506080 RBBP6Q7Z6E9 1792 aaKnown RBP11.73□□□□□ -0.53
PTPN20-216ENST00000506080 LAMB1P07942 1786 aa11.72□□□□□ -0.53
PTPN20-216ENST00000506080 FLIIQ13045 1269 aa11.72□□□□□ -0.53
PTPN20-216ENST00000506080 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms