RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 PTPRCP08575 1304 aa13.96□□□□□ -0.17
UBE2D3-219ENST00000505207 PDE4DIPQ5VU43 2346 aa13.96□□□□□ -0.17
UBE2D3-219ENST00000505207 INTS3Q68E01 1043 aaKnown RBP13.96□□□□□ -0.17
UBE2D3-219ENST00000505207 CLMNQ96JQ2 1002 aa13.96□□□□□ -0.17
UBE2D3-219ENST00000505207 TDRD3Q9H7E2 651 aaKnown RBP13.96□□□□□ -0.17
UBE2D3-219ENST00000505207 TMOD2Q9NZR1 351 aa13.96□□□□□ -0.17
UBE2D3-219ENST00000505207 FZD1Q9UP38 647 aa13.96□□□□□ -0.17
UBE2D3-219ENST00000505207 PCDHAC2Q9Y5I4 1007 aa13.96□□□□□ -0.17
UBE2D3-219ENST00000505207 ZNF646O15015 1829 aaPredicted RBP13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 NBPF7P0C2Y1 421 aaPredicted RBP13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 CRKP46108 304 aa13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 RABL6Q3YEC7 729 aaPredicted RBP13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 FBXO33Q7Z6M2 555 aa13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 MRIQ9BWK5 157 aa13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 PUS3Q9BZE2 481 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 BICC1Q9H694 974 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 SUGT1Q9Y2Z0 365 aa13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 TRIM17Q9Y577 477 aa13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 CSADQ9Y600 493 aa13.95□□□□□ -0.18
UBE2D3-219ENST00000505207 MAST3O60307 1309 aa13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 E9PSI1 815 aa13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 PDE8BO95263 885 aa13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 IFIT1P09914 478 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 MAP3K9P80192 1104 aa13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 CHAF1AQ13111 956 aaPredicted RBP13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 PRPF38BQ5VTL8 546 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 TEKT1Q969V4 418 aa13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 KAZALD1Q96I82 304 aa13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 R3HDMLQ9H3Y0 253 aa13.94□□□□□ -0.18
UBE2D3-219ENST00000505207 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
UBE2D3-219ENST00000505207 TCP10L2B9ZVM9 353 aa13.93□□□□□ -0.18
UBE2D3-219ENST00000505207 IGF2BP3O00425 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBE2D3-219ENST00000505207 GTF2A2P52657 109 aa13.93□□□□□ -0.18
UBE2D3-219ENST00000505207 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
UBE2D3-219ENST00000505207 OPTNQ96CV9 577 aa13.93□□□□□ -0.18
UBE2D3-219ENST00000505207 ELP3Q9H9T3 547 aa13.93□□□□□ -0.18
UBE2D3-219ENST00000505207 HDAC5Q9UQL6 1122 aa13.93□□□□□ -0.18
UBE2D3-219ENST00000505207 SP3Q02447 781 aa13.92□□□□□ -0.18
UBE2D3-219ENST00000505207 PUM3Q15397 648 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-219ENST00000505207 FKBP1CQ5VVH2 108 aa13.92□□□□□ -0.18
UBE2D3-219ENST00000505207 OTOP1Q7RTM1 612 aa13.92□□□□□ -0.18
UBE2D3-219ENST00000505207 EFCC1Q9HA90 598 aa13.92□□□□□ -0.18
UBE2D3-219ENST00000505207 ZFYVE28Q9HCC9 887 aa13.92□□□□□ -0.18
UBE2D3-219ENST00000505207 SSC5DA1L4H1 1573 aa13.92□□□□□ -0.18
UBE2D3-219ENST00000505207 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 CRHR2Q13324 411 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 DCAF15Q66K64 600 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 FAM83AQ86UY5 434 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 ZDHHC15Q96MV8 337 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 TEPSINQ96N21 525 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 TMEM39BQ9GZU3 492 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 PCDH10Q9P2E7 1040 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 IQSEC3Q9UPP2 1182 aaPredicted RBP13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 ECM29Q5VYK3 1845 aa13.91□□□□□ -0.18
UBE2D3-219ENST00000505207 ZNF521Q96K83 1311 aa13.9□□□□□ -0.18
UBE2D3-219ENST00000505207 SLC5A1P13866 664 aa13.9□□□□□ -0.18
UBE2D3-219ENST00000505207 GJA5P36382 358 aa13.9□□□□□ -0.18
UBE2D3-219ENST00000505207 BCAMP50895 628 aa13.9□□□□□ -0.18
UBE2D3-219ENST00000505207 ALDH1L2Q3SY69 923 aa13.9□□□□□ -0.18
UBE2D3-219ENST00000505207 ANKRD44Q8N8A2 993 aa13.9□□□□□ -0.18
UBE2D3-219ENST00000505207 WDR66Q8TBY9 1149 aa13.9□□□□□ -0.18
UBE2D3-219ENST00000505207 USP44Q9H0E7 712 aa13.9□□□□□ -0.18
UBE2D3-219ENST00000505207 PTPN22Q9Y2R2 807 aa13.9□□□□□ -0.18
UBE2D3-219ENST00000505207 AOX1Q06278 1338 aa13.9□□□□□ -0.19
UBE2D3-219ENST00000505207 CCL15-CCL14A0A0B4J2E2 113 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 CETPP11597 493 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 VGLL4Q14135 290 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 TAF1CQ15572 869 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 CCL15Q16663 113 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 HHIPL2Q6UWX4 724 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 NBPF11Q86T75 865 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 VGLL2Q8N8G2 317 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 CD99L2Q8TCZ2 262 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 LPIN2Q92539 896 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 PTPN18Q99952 460 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 ZCCHC17Q9NP64 241 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 GNL3LQ9NVN8 582 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
UBE2D3-219ENST00000505207 EYA2O00167 538 aa13.88□□□□□ -0.19
UBE2D3-219ENST00000505207 KIF22Q14807 665 aa13.88□□□□□ -0.19
UBE2D3-219ENST00000505207 ERO1BQ86YB8 467 aa13.88□□□□□ -0.19
UBE2D3-219ENST00000505207 GCC1Q96CN9 775 aa13.88□□□□□ -0.19
UBE2D3-219ENST00000505207 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
UBE2D3-219ENST00000505207 TMEM106CQ9BVX2 250 aa13.88□□□□□ -0.19
UBE2D3-219ENST00000505207 A0A1B0GUL6 1792 aa13.88□□□□□ -0.19
UBE2D3-219ENST00000505207 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
UBE2D3-219ENST00000505207 FGFR2P21802 821 aa13.87□□□□□ -0.19
UBE2D3-219ENST00000505207 SLFN5Q08AF3 891 aa13.87□□□□□ -0.19
UBE2D3-219ENST00000505207 SNAPC2Q13487 334 aa13.87□□□□□ -0.19
UBE2D3-219ENST00000505207 BRI3BPQ8WY22 251 aa13.87□□□□□ -0.19
UBE2D3-219ENST00000505207 WRNIP1Q96S55 665 aa13.87□□□□□ -0.19
UBE2D3-219ENST00000505207 CEP126Q9P2H0 1117 aa13.87□□□□□ -0.19
UBE2D3-219ENST00000505207 TNRC18O15417 2968 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-219ENST00000505207 CT47B1P0C2W7 299 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-219ENST00000505207 UBTFL1P0CB47 393 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms