RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 NARFQ9UHQ1 456 aa9.38□□□□□ -0.91
CDC42-205ENST00000498236 TRMT112Q9UI30 125 aaKnown RBP9.38□□□□□ -0.91
CDC42-205ENST00000498236 SERPINA10Q9UK55 444 aa9.38□□□□□ -0.91
CDC42-205ENST00000498236 PA2G4Q9UQ80 394 aaKnown RBP9.38□□□□□ -0.91
CDC42-205ENST00000498236 C4BP0C0L5 1744 aa9.38□□□□□ -0.91
CDC42-205ENST00000498236 LCE2BO14633 110 aa9.37□□□□□ -0.91
CDC42-205ENST00000498236 PLSCR1O15162 318 aa9.37□□□□□ -0.91
CDC42-205ENST00000498236 PDE8AO60658 829 aa9.37□□□□□ -0.91
CDC42-205ENST00000498236 GPTP24298 496 aa9.37□□□□□ -0.91
CDC42-205ENST00000498236 LYPD8Q6UX82 237 aa9.37□□□□□ -0.91
CDC42-205ENST00000498236 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
CDC42-205ENST00000498236 UTP14AQ9BVJ6 771 aaKnown RBP9.37□□□□□ -0.91
CDC42-205ENST00000498236 GPR108Q9NPR9 543 aa9.37□□□□□ -0.91
CDC42-205ENST00000498236 RGS17Q9UGC6 210 aaPredicted RBP9.37□□□□□ -0.91
CDC42-205ENST00000498236 RTCBQ9Y3I0 505 aaKnown RBP9.37□□□□□ -0.91
CDC42-205ENST00000498236 SH3TC1Q8TE82 1336 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 IRS4O14654 1257 aaPredicted RBP9.36□□□□□ -0.91
CDC42-205ENST00000498236 CDC45O75419 566 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 NTSR2O95665 410 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 SDSP20132 328 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 IL15P40933 162 aaPredicted RBP9.36□□□□□ -0.91
CDC42-205ENST00000498236 CTSWP56202 376 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 IRF5Q13568 498 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 NR6A1Q15406 480 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 WASHC4Q2M389 1173 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 CCDC57Q2TAC2 916 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 SUSD4Q5VX71 490 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 TTLL11Q8NHH1 800 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 EPS8L1Q8TE68 723 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 GPATCH3Q96I76 525 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 IL1RAPL2Q9NP60 686 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 LRRC4BQ9NT99 713 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 NIP7Q9Y221 180 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDC42-205ENST00000498236 RTL9Q8NET4 1388 aa9.36□□□□□ -0.91
CDC42-205ENST00000498236 TUBGCP6Q96RT7 1819 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 EYA2O00167 538 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 ERC2O15083 957 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 GPR37L1O60883 481 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 GLRX3O76003 335 aaKnown RBP9.35□□□□□ -0.91
CDC42-205ENST00000498236 TRIM37O94972 964 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 IFIT2P09913 472 aaKnown RBP9.35□□□□□ -0.91
CDC42-205ENST00000498236 GGCXP38435 758 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 ANP32AP39687 249 aaKnown RBP9.35□□□□□ -0.91
CDC42-205ENST00000498236 KCNQ4P56696 695 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 IFIT5Q13325 482 aaKnown RBP9.35□□□□□ -0.91
CDC42-205ENST00000498236 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 ATG9AQ7Z3C6 839 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 KLHDC4Q8TBB5 520 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 PI4K2BQ8TCG2 481 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 ZNF516Q92618 1163 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 EAF2Q96CJ1 260 aaPredicted RBP9.35□□□□□ -0.91
CDC42-205ENST00000498236 UPF2Q9HAU5 1272 aaKnown RBP9.35□□□□□ -0.91
CDC42-205ENST00000498236 ECHDC1Q9NTX5 307 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 RGPD3A6NKT7 1758 aaPredicted RBP9.35□□□□□ -0.91
CDC42-205ENST00000498236 LAMB2P55268 1798 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 RGPD4Q7Z3J3 1758 aa9.35□□□□□ -0.91
CDC42-205ENST00000498236 POM121CA8CG34 1229 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 ZPR1O75312 459 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 SSFA2P28290 1259 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 SLC10A5Q5PT55 438 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 CASC1Q6TDU7 716 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 AACSQ86V21 672 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 PNMA1Q8ND90 353 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 NYXQ9GZU5 481 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 SIL1Q9H173 461 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 CHMP3Q9Y3E7 222 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 MYH3P11055 1940 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 LRP5O75197 1615 aa9.34□□□□□ -0.91
CDC42-205ENST00000498236 COL24A1Q17RW2 1714 aa9.34□□□□□ -0.92
CDC42-205ENST00000498236 JUNDP17535 347 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 TFCP2Q12800 502 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 TXNRD1Q16881 649 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 TNNI3KQ59H18 835 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 USPL1Q5W0Q7 1092 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 POTEAQ6S8J7 498 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 TICAM2Q86XR7 235 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 SYNE4Q8N205 404 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 CALR3Q96L12 384 aaKnown RBP9.33□□□□□ -0.92
CDC42-205ENST00000498236 TBC1D32Q96NH3 1257 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.33□□□□□ -0.92
CDC42-205ENST00000498236 FPGT-TNNI3KV9GXZ4 949 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 UBR3Q6ZT12 1888 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 C4AP0C0L4 1744 aa9.33□□□□□ -0.92
CDC42-205ENST00000498236 DDX60Q8IY21 1712 aaKnown RBP9.32□□□□□ -0.92
CDC42-205ENST00000498236 ANKRD18BA2A2Z9 1011 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 ITGA6P23229 1130 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 RFC4P35249 363 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 COPS2P61201 443 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 SF3B3Q15393 1217 aaKnown RBP9.32□□□□□ -0.92
CDC42-205ENST00000498236 CCDC152Q4G0S7 254 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 MSS51Q4VC12 460 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 TBC1D9BQ66K14 1250 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 AMIGO3Q86WK7 504 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 GLMNQ92990 594 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 SETDB2Q96T68 719 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 SPSB2Q99619 263 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 GREM2Q9H772 168 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 RIPOR2Q9Y4F9 1068 aa9.32□□□□□ -0.92
CDC42-205ENST00000498236 ZNF609O15014 1411 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms