RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 CACNA1FO60840 1977 aa9□□□□□ -0.97
CHCHD3-206ENST00000496427 SASH1O94885 1247 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 TTLL12Q14166 644 aaPredicted RBP8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 ZBTB38Q8NAP3 1195 aaPredicted RBP8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 AGBL3Q8NEM8 1001 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 GMLQ99445 158 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 R3HDMLQ9H3Y0 253 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 MBIPQ9NS73 344 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 HYPKQ9NX55 129 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 FZD1Q9UP38 647 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 XDHP47989 1333 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 PITPNM2Q9BZ72 1349 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 CENPFP49454 3210 aa8.99□□□□□ -0.97
CHCHD3-206ENST00000496427 HTTP42858 3142 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 USP17L3A6NCW0 530 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 USP17L4A6NCW7 530 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 ELL2O00472 640 aaPredicted RBP8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 PDE8AO60658 829 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 HOXB7P09629 217 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 USP17L8P0C7I0 530 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 PRKCSHP14314 528 aaPredicted RBP8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 CAMK2BQ13554 666 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 CCDC152Q4G0S7 254 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 USP17L1Q7RTZ2 530 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 ANKRD18AQ8IVF6 992 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 SEPT9Q9UHD8 586 aaPredicted RBP8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 SSC5DA1L4H1 1573 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 MED23Q9ULK4 1368 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 BRCA2P51587 3418 aa8.98□□□□□ -0.97
CHCHD3-206ENST00000496427 MYH13Q9UKX3 1938 aa8.97□□□□□ -0.97
CHCHD3-206ENST00000496427 KIAA0100Q14667 2235 aaKnown RBP8.97□□□□□ -0.97
CHCHD3-206ENST00000496427 GPR25O00155 361 aa8.97□□□□□ -0.97
CHCHD3-206ENST00000496427 PCCAP05165 728 aaPredicted RBP8.97□□□□□ -0.97
CHCHD3-206ENST00000496427 FKBP1BP68106 108 aa8.97□□□□□ -0.97
CHCHD3-206ENST00000496427 TRIM28Q13263 835 aaKnown RBP8.97□□□□□ -0.97
CHCHD3-206ENST00000496427 RUNDC1Q96C34 613 aa8.97□□□□□ -0.97
CHCHD3-206ENST00000496427 MKI67P46013 3256 aaKnown RBP8.97□□□□□ -0.97
CHCHD3-206ENST00000496427 WNT10BO00744 389 aa8.96□□□□□ -0.98
CHCHD3-206ENST00000496427 ATP2B4P23634 1241 aa8.96□□□□□ -0.98
CHCHD3-206ENST00000496427 KLRK1P26718 216 aa8.96□□□□□ -0.98
CHCHD3-206ENST00000496427 PTPN12Q05209 780 aaKnown RBP8.96□□□□□ -0.98
CHCHD3-206ENST00000496427 DACT2Q5SW24 774 aa8.96□□□□□ -0.98
CHCHD3-206ENST00000496427 FBXO46Q6PJ61 603 aaPredicted RBP8.96□□□□□ -0.98
CHCHD3-206ENST00000496427 TXNRD3Q86VQ6 643 aa8.96□□□□□ -0.98
CHCHD3-206ENST00000496427 CWC25Q9NXE8 425 aaPredicted RBP8.96□□□□□ -0.98
CHCHD3-206ENST00000496427 MYBBP1AQ9BQG0 1328 aaKnown RBP8.96□□□□□ -0.98
CHCHD3-206ENST00000496427 TM4SF4P48230 202 aa8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 CCT4P50991 539 aaKnown RBP8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 CTSWP56202 376 aa8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 WDR43Q15061 677 aaKnown RBP eCLIP8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 RALBP1Q15311 655 aa8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 PODNQ7Z5L7 613 aa8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 PACS2Q86VP3 889 aa8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 CCDC191Q8NCU4 936 aa8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 GREM2Q9H772 168 aa8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 ADAMTS8Q9UP79 889 aa8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 PCDHAC2Q9Y5I4 1007 aa8.95□□□□□ -0.98
CHCHD3-206ENST00000496427 FKTNO75072 461 aa8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 IGKV5-2P06315 115 aa8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 NF2P35240 595 aa8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 PKN2Q16513 984 aaKnown RBP8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 KIAA0825Q8IV33 1275 aa8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 C8orf58Q8NAV2 365 aa8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 METTL22Q9BUU2 404 aaPredicted RBP8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 ANGEL1Q9UNK9 670 aaKnown RBP8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 MINPP1Q9UNW1 487 aa8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 MAP3K2Q9Y2U5 619 aa8.94□□□□□ -0.98
CHCHD3-206ENST00000496427 AK9Q5TCS8 1911 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 ZNF853P0CG23 659 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 SREBF2Q12772 1141 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 CWF19L2Q2TBE0 894 aaKnown RBP8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 SPRYD7Q5W111 196 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 TRAF7Q6Q0C0 670 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 ARMC9Q7Z3E5 817 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 TTLL11Q8NHH1 800 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 CLMNQ96JQ2 1002 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 CDC5LQ99459 802 aaKnown RBP8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 TRIM17Q9Y577 477 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 COL1A1P02452 1464 aaPredicted RBP8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 MGAMO43451 1857 aa8.93□□□□□ -0.98
CHCHD3-206ENST00000496427 AOX1Q06278 1338 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 MYO3BQ8WXR4 1341 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 SNAP23O00161 211 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 IGF2BP3O00425 579 aaKnown RBP eCLIP8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 GFRA3O60609 400 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 HSP90B1P14625 803 aaKnown RBP8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 PPP4CP60510 307 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 GTF2IP78347 998 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 CAP1Q01518 475 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 STRIP1Q5VSL9 837 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 OTOP1Q7RTM1 612 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 APOBEC3FQ8IUX4 373 aaKnown RBP8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 OGFOD1Q8N543 542 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 TSPYL6Q8N831 410 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 BSDC1Q9NW68 430 aaPredicted RBP8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 IFT57Q9NWB7 429 aa8.92□□□□□ -0.98
CHCHD3-206ENST00000496427 ZNF804BA4D1E1 1349 aa8.91□□□□□ -0.98
CHCHD3-206ENST00000496427 CLRN2A0PK11 232 aa8.91□□□□□ -0.98
CHCHD3-206ENST00000496427 PI4KAP2A4QPH2 592 aa8.91□□□□□ -0.98
CHCHD3-206ENST00000496427 F8W031 263 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms