RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 MPHOSPH8Q99549 860 aa17.34■□□□□ 0.37
CHTOP-206ENST00000495554 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
CHTOP-206ENST00000495554 MYO5AQ9Y4I1 1855 aaKnown RBP17.34■□□□□ 0.37
CHTOP-206ENST00000495554 CAMK4Q16566 473 aa17.34■□□□□ 0.37
CHTOP-206ENST00000495554 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-206ENST00000495554 RALYLQ86SE5 291 aaKnown RBP17.34■□□□□ 0.37
CHTOP-206ENST00000495554 MB21D2Q8IYB1 491 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-206ENST00000495554 BICD2Q8TD16 824 aa17.34■□□□□ 0.37
CHTOP-206ENST00000495554 WDR19Q8NEZ3 1342 aa17.33■□□□□ 0.37
CHTOP-206ENST00000495554 MYH7P12883 1935 aa17.33■□□□□ 0.37
CHTOP-206ENST00000495554 ATRNO75882 1429 aa17.33■□□□□ 0.36
CHTOP-206ENST00000495554 PRC1O43663 620 aa17.33■□□□□ 0.36
CHTOP-206ENST00000495554 DHX16O60231 1041 aaKnown RBP17.33■□□□□ 0.36
CHTOP-206ENST00000495554 ADD1P35611 737 aaKnown RBP17.33■□□□□ 0.36
CHTOP-206ENST00000495554 RBM43Q6ZSC3 357 aaKnown RBP17.33■□□□□ 0.36
CHTOP-206ENST00000495554 SECISBP2LQ93073 1101 aaKnown RBP17.33■□□□□ 0.36
CHTOP-206ENST00000495554 CLSTN2Q9H4D0 955 aa17.33■□□□□ 0.36
CHTOP-206ENST00000495554 COL4A1P02462 1669 aa17.32■□□□□ 0.36
CHTOP-206ENST00000495554 FAM200AQ8TCP9 573 aa17.32■□□□□ 0.36
CHTOP-206ENST00000495554 BCL2L12Q9HB09 334 aa17.32■□□□□ 0.36
CHTOP-206ENST00000495554 USP21Q9UK80 565 aa17.32■□□□□ 0.36
CHTOP-206ENST00000495554 RCOR1Q9UKL0 485 aa17.32■□□□□ 0.36
CHTOP-206ENST00000495554 ZNF652Q9Y2D9 606 aa17.32■□□□□ 0.36
CHTOP-206ENST00000495554 CARMIL3Q8ND23 1372 aa17.32■□□□□ 0.36
CHTOP-206ENST00000495554 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
CHTOP-206ENST00000495554 TYRO3Q06418 890 aa17.32■□□□□ 0.36
CHTOP-206ENST00000495554 C3orf67Q6ZVT6 689 aa17.32■□□□□ 0.36
CHTOP-206ENST00000495554 ZNF396Q96N95 335 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-206ENST00000495554 CNTNAP4Q9C0A0 1308 aa17.31■□□□□ 0.36
CHTOP-206ENST00000495554 BCORQ6W2J9 1755 aa17.31■□□□□ 0.36
CHTOP-206ENST00000495554 TCRBV5S4A2TA0A5A2 114 aa17.31■□□□□ 0.36
CHTOP-206ENST00000495554 NR1I2O75469 434 aa17.31■□□□□ 0.36
CHTOP-206ENST00000495554 ERFEQ4G0M1 354 aa17.31■□□□□ 0.36
CHTOP-206ENST00000495554 FAM182BQ5T319 152 aa17.31■□□□□ 0.36
CHTOP-206ENST00000495554 GPHNQ9NQX3 736 aaPredicted RBP17.31■□□□□ 0.36
CHTOP-206ENST00000495554 WWC3Q9ULE0 1092 aa17.31■□□□□ 0.36
CHTOP-206ENST00000495554 SLC5A1P13866 664 aa17.31■□□□□ 0.36
CHTOP-206ENST00000495554 TRDNQ13061 729 aa17.31■□□□□ 0.36
CHTOP-206ENST00000495554 KLF18A0A0U1RQI7 1052 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 FDPSP14324 419 aaKnown RBP17.3■□□□□ 0.36
CHTOP-206ENST00000495554 IGHMBP2P38935 993 aaKnown RBP17.3■□□□□ 0.36
CHTOP-206ENST00000495554 RASGRF1Q13972 1273 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 MRVI1Q9Y6F6 885 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 ZNF532Q9HCE3 1301 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 PDE6AP16499 860 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 FOSBP53539 338 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 ANTXR2P58335 489 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 CKAP2LQ8IYA6 745 aa17.3■□□□□ 0.36
CHTOP-206ENST00000495554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHTOP-206ENST00000495554 GOLGA8BA8MQT2 603 aa17.29■□□□□ 0.36
CHTOP-206ENST00000495554 CEBPZQ03701 1054 aaKnown RBP17.29■□□□□ 0.36
CHTOP-206ENST00000495554 CHRNDQ07001 517 aa17.29■□□□□ 0.36
CHTOP-206ENST00000495554 RC3H1Q5TC82 1133 aaKnown RBP17.29■□□□□ 0.36
CHTOP-206ENST00000495554 LAMB2P55268 1798 aa17.29■□□□□ 0.36
CHTOP-206ENST00000495554 BCAMP50895 628 aa17.29■□□□□ 0.36
CHTOP-206ENST00000495554 SF3B3Q15393 1217 aaKnown RBP17.29■□□□□ 0.36
CHTOP-206ENST00000495554 TBC1D9BQ66K14 1250 aa17.29■□□□□ 0.36
CHTOP-206ENST00000495554 HPS5Q9UPZ3 1129 aa17.29■□□□□ 0.36
CHTOP-206ENST00000495554 APPP05067 770 aa17.28■□□□□ 0.36
CHTOP-206ENST00000495554 PLCB2Q00722 1185 aa17.28■□□□□ 0.36
CHTOP-206ENST00000495554 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
CHTOP-206ENST00000495554 NBPF3Q9H094 633 aa17.28■□□□□ 0.36
CHTOP-206ENST00000495554 SPATA31A6Q5VVP1 1343 aa17.28■□□□□ 0.36
CHTOP-206ENST00000495554 PPFIA3O75145 1194 aa17.28■□□□□ 0.36
CHTOP-206ENST00000495554 RPS6KA4O75676 772 aa17.28■□□□□ 0.36
CHTOP-206ENST00000495554 SASS6Q6UVJ0 657 aa17.28■□□□□ 0.36
CHTOP-206ENST00000495554 WTIPA6NIX2 430 aaPredicted RBP17.27■□□□□ 0.36
CHTOP-206ENST00000495554 CPLX1O14810 134 aa17.27■□□□□ 0.36
CHTOP-206ENST00000495554 GUCY1B3Q02153 619 aa17.27■□□□□ 0.36
CHTOP-206ENST00000495554 KIAA2012Q0VF49 1180 aa17.27■□□□□ 0.36
CHTOP-206ENST00000495554 BICDL1Q6ZP65 573 aa17.27■□□□□ 0.36
CHTOP-206ENST00000495554 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.36
CHTOP-206ENST00000495554 AIDAQ96BJ3 306 aa17.27■□□□□ 0.36
CHTOP-206ENST00000495554 RGL2O15211 777 aa17.27■□□□□ 0.35
CHTOP-206ENST00000495554 SLC10A5Q5PT55 438 aa17.27■□□□□ 0.35
CHTOP-206ENST00000495554 ILDR1Q86SU0 546 aaPredicted RBP17.27■□□□□ 0.35
CHTOP-206ENST00000495554 NKX2-3Q8TAU0 364 aa17.27■□□□□ 0.35
CHTOP-206ENST00000495554 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.35
CHTOP-206ENST00000495554 SRP68Q9UHB9 627 aaKnown RBP17.27■□□□□ 0.35
CHTOP-206ENST00000495554 NARFQ9UHQ1 456 aa17.27■□□□□ 0.35
CHTOP-206ENST00000495554 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 CAVIN2O95810 425 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 TERF1P54274 439 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 MAP3K12Q12852 859 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 ANO6Q4KMQ2 910 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 C8orf76Q96K31 380 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 FTOQ9C0B1 505 aaKnown RBP eCLIP17.26■□□□□ 0.35
CHTOP-206ENST00000495554 ANGEL1Q9UNK9 670 aaKnown RBP17.26■□□□□ 0.35
CHTOP-206ENST00000495554 BTAF1O14981 1849 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 CTAGE5O15320 804 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 AP5Z1O43299 807 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 TAF1P21675 1872 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 ALX1Q15699 326 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 TBC1D10CQ8IV04 446 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
CHTOP-206ENST00000495554 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 FBXO18Q8NFZ0 1043 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 ORC3Q9UBD5 711 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms