RNA–Protein interactions for RNA: ENST00000495537.1

KCTD3-205, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 1 (best)

Gene KCTD3, Length 2,722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-205ENST00000495537 RIPOR1Q6ZS17 1223 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 PRICKLE2Q7Z3G6 844 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 TADA2BQ86TJ2 420 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 CACTINQ8WUQ7 758 aaKnown RBP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 MIEF2Q96C03 454 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 UTP14AQ9BVJ6 771 aaKnown RBP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 TEX13AQ9BXU3 409 aaPredicted RBP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 LNPKQ9C0E8 428 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 ARGLU1Q9NWB6 273 aaPredicted RBP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 CEP152O94986 1710 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 PPIP5K1Q6PFW1 1433 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 POLR3GO15318 223 aaPredicted RBP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 SMARCA5O60264 1052 aaPredicted RBP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 SMC2O95347 1197 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 HMGB1P09429 215 aaKnown RBP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 TPM1P09493 284 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 CHMLP26374 656 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 KCNJ6P48051 423 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 ZNF75DP51815 510 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 WDR44Q5JSH3 913 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 ALYREFQ86V81 257 aaKnown RBP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 SPC24Q8NBT2 197 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 TMX3Q96JJ7 454 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 DCAF5Q96JK2 942 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 CALR3Q96L12 384 aaKnown RBP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 NLRP3Q96P20 1036 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.83□□□□□ -1.8
KCTD3-205ENST00000495537 MSH6P52701 1360 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 PIK3R4Q99570 1358 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 SYNJ2O15056 1496 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 ABCA10Q8WWZ4 1543 aa3.83□□□□□ -1.8
KCTD3-205ENST00000495537 USP27XA6NNY8 438 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 MAP2K7O14733 419 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CCDC192P0DO97 292 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 DDR1Q08345 913 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 PLA2G4EQ3MJ16 856 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 ARHGAP29Q52LW3 1261 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CCDC158Q5M9N0 1113 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 KCNV1Q6PIU1 500 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 SARM1Q6SZW1 724 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 ATF7IPQ6VMQ6 1270 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 RBM43Q6ZSC3 357 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 LRRC8AQ8IWT6 810 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CCAR2Q8N163 923 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 GALNT6Q8NCL4 622 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 TDRD7Q8NHU6 1098 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 FUT8Q9BYC5 575 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 ZCCHC17Q9NP64 241 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CYLDQ9NQC7 956 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CUEDC1Q9NWM3 386 aaPredicted RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 WDR33Q9C0J8 1336 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 SHANK2Q9UPX8 1470 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 COQ9O75208 318 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 RTN2O75298 545 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 TADA3O75528 432 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 A2MP01023 1474 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 GSPT1P15170 499 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 RHOQP17081 205 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CASTP20810 708 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 USP8P40818 1118 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 MRPL12P52815 198 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 EIF5P55010 431 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CCZ1BP86790 482 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CCZ1P86791 482 aaPredicted RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 ADCY2Q08462 1091 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 GRIK3Q13003 919 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 ZRSR1Q15695 479 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 SLC27A3Q5K4L6 730 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 JAKMIP3Q5VZ66 844 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CC2D1AQ6P1N0 951 aaPredicted RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 LEKR1Q6ZMV7 388 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 ERC1Q8IUD2 1116 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 KDF1Q8NAX2 398 aaPredicted RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 CNTNAP5Q8WYK1 1306 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 KAT2BQ92831 832 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 SRRTQ9BXP5 876 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 FAM107BQ9H098 131 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 ESF1Q9H501 851 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 YTHDC2Q9H6S0 1430 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 GNL3LQ9NVN8 582 aaKnown RBP3.82□□□□□ -1.8
KCTD3-205ENST00000495537 NRBP1Q9UHY1 535 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 TRAK1Q9UPV9 953 aa3.82□□□□□ -1.8
KCTD3-205ENST00000495537 PDS5BQ9NTI5 1447 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 ABCC11Q96J66 1382 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 ANKRD18BA2A2Z9 1011 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 EFCAB8A8MWE9 144 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 H0YHG0 523 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 MEN1O00255 615 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 ADAM23O75077 832 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 USP17L8P0C7I0 530 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 MX2P20592 715 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 HNRNPH1P31943 449 aaKnown RBP3.81□□□□□ -1.8
KCTD3-205ENST00000495537 MAP2K3P46734 347 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 LMAN1P49257 510 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 SARNPP82979 210 aaKnown RBP3.81□□□□□ -1.8
KCTD3-205ENST00000495537 ICA1Q05084 483 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 MTA1Q13330 715 aa3.81□□□□□ -1.8
KCTD3-205ENST00000495537 CCDC144BQ3MJ40 725 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms