RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 FAM13AO94988 1023 aa8.57□□□□□ -1.04
VPS50-219ENST00000495039 ADH5P11766 374 aa8.57□□□□□ -1.04
VPS50-219ENST00000495039 ADMP35318 185 aa8.57□□□□□ -1.04
VPS50-219ENST00000495039 HP1BP3Q5SSJ5 553 aaPredicted RBP8.57□□□□□ -1.04
VPS50-219ENST00000495039 METTL12A8MUP2 240 aa8.56□□□□□ -1.04
VPS50-219ENST00000495039 MAP7Q14244 749 aa8.56□□□□□ -1.04
VPS50-219ENST00000495039 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
VPS50-219ENST00000495039 ASIC4Q96FT7 647 aa8.56□□□□□ -1.04
VPS50-219ENST00000495039 NRSN2Q9GZP1 204 aa8.56□□□□□ -1.04
VPS50-219ENST00000495039 CYP11A1P05108 521 aa8.55□□□□□ -1.04
VPS50-219ENST00000495039 SSFA2P28290 1259 aa8.55□□□□□ -1.04
VPS50-219ENST00000495039 DUSP27Q5VZP5 1158 aa8.55□□□□□ -1.04
VPS50-219ENST00000495039 AGBL5Q8NDL9 886 aa8.55□□□□□ -1.04
VPS50-219ENST00000495039 FLCNQ8NFG4 579 aa8.55□□□□□ -1.04
VPS50-219ENST00000495039 CLEC4MQ9H2X3 399 aaPredicted RBP8.55□□□□□ -1.04
VPS50-219ENST00000495039 ZFYVE1Q9HBF4 777 aa8.55□□□□□ -1.04
VPS50-219ENST00000495039 MTMR7Q9Y216 660 aa8.55□□□□□ -1.04
VPS50-219ENST00000495039 ACTL7BQ9Y614 415 aa8.55□□□□□ -1.04
VPS50-219ENST00000495039 FAM170BA6NMN3 283 aa8.54□□□□□ -1.04
VPS50-219ENST00000495039 CYP27A1Q02318 531 aa8.54□□□□□ -1.04
VPS50-219ENST00000495039 PCDH1Q08174 1060 aa8.54□□□□□ -1.04
VPS50-219ENST00000495039 OGFOD2Q6N063 350 aa8.54□□□□□ -1.04
VPS50-219ENST00000495039 GATA6Q92908 595 aa8.54□□□□□ -1.04
VPS50-219ENST00000495039 ZFYVE28Q9HCC9 887 aa8.54□□□□□ -1.04
VPS50-219ENST00000495039 FZD6O60353 706 aa8.53□□□□□ -1.04
VPS50-219ENST00000495039 JUNBP17275 347 aaPredicted RBP8.53□□□□□ -1.04
VPS50-219ENST00000495039 RAB6AP20340 208 aa8.53□□□□□ -1.04
VPS50-219ENST00000495039 MAOBP27338 520 aa8.53□□□□□ -1.04
VPS50-219ENST00000495039 SF3B2Q13435 895 aaKnown RBP8.53□□□□□ -1.04
VPS50-219ENST00000495039 GJD3Q8N144 294 aa8.53□□□□□ -1.04
VPS50-219ENST00000495039 A0A096LPE4 126 aa8.52□□□□□ -1.05
VPS50-219ENST00000495039 A0A1W2PPZ6 126 aa8.52□□□□□ -1.05
VPS50-219ENST00000495039 NFICP08651 508 aa8.52□□□□□ -1.05
VPS50-219ENST00000495039 ITGB5P18084 799 aa8.52□□□□□ -1.05
VPS50-219ENST00000495039 POU4F3Q15319 338 aa8.52□□□□□ -1.05
VPS50-219ENST00000495039 CCNJLQ8IV13 435 aa8.52□□□□□ -1.05
VPS50-219ENST00000495039 LRRC4CQ9HCJ2 640 aa8.52□□□□□ -1.05
VPS50-219ENST00000495039 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.51□□□□□ -1.05
VPS50-219ENST00000495039 TMEM88BA6NKF7 163 aa8.51□□□□□ -1.05
VPS50-219ENST00000495039 POLR3DP05423 398 aaPredicted RBP8.51□□□□□ -1.05
VPS50-219ENST00000495039 DYMQ7RTS9 669 aa8.51□□□□□ -1.05
VPS50-219ENST00000495039 DDX54Q8TDD1 881 aaKnown RBP8.51□□□□□ -1.05
VPS50-219ENST00000495039 SEMA6CQ9H3T2 930 aa8.51□□□□□ -1.05
VPS50-219ENST00000495039 PAK6Q9NQU5 681 aaPredicted RBP8.51□□□□□ -1.05
VPS50-219ENST00000495039 RAD18Q9NS91 495 aa8.51□□□□□ -1.05
VPS50-219ENST00000495039 ZC3H7BQ9UGR2 993 aaKnown RBP8.51□□□□□ -1.05
VPS50-219ENST00000495039 FKBP4Q02790 459 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS50-219ENST00000495039 ZNF423Q2M1K9 1284 aa8.5□□□□□ -1.05
VPS50-219ENST00000495039 AKAP4Q5JQC9 854 aa8.5□□□□□ -1.05
VPS50-219ENST00000495039 ZNF765Q7L2R6 523 aa8.5□□□□□ -1.05
VPS50-219ENST00000495039 POU5F2Q8N7G0 328 aa8.5□□□□□ -1.05
VPS50-219ENST00000495039 LIN7BQ9HAP6 207 aa8.5□□□□□ -1.05
VPS50-219ENST00000495039 FAM105AQ9NUU6 356 aa8.5□□□□□ -1.05
VPS50-219ENST00000495039 AP4E1Q9UPM8 1137 aa8.5□□□□□ -1.05
VPS50-219ENST00000495039 A0A1W2PP55 124 aa8.49□□□□□ -1.05
VPS50-219ENST00000495039 CTSBP07858 339 aa8.49□□□□□ -1.05
VPS50-219ENST00000495039 COL19A1Q14993 1142 aa8.49□□□□□ -1.05
VPS50-219ENST00000495039 GALNT12Q8IXK2 581 aa8.49□□□□□ -1.05
VPS50-219ENST00000495039 CORO1BQ9BR76 489 aa8.49□□□□□ -1.05
VPS50-219ENST00000495039 ACSS3Q9H6R3 686 aa8.49□□□□□ -1.05
VPS50-219ENST00000495039 CCDC87Q9NVE4 849 aa8.49□□□□□ -1.05
VPS50-219ENST00000495039 GRIA4P48058 902 aa8.48□□□□□ -1.05
VPS50-219ENST00000495039 JAG1P78504 1218 aa8.48□□□□□ -1.05
VPS50-219ENST00000495039 TCF12Q99081 682 aa8.48□□□□□ -1.05
VPS50-219ENST00000495039 ABL1P00519 1130 aa8.47□□□□□ -1.05
VPS50-219ENST00000495039 ASPAP45381 313 aa8.47□□□□□ -1.05
VPS50-219ENST00000495039 SPRED3Q2MJR0 410 aa8.47□□□□□ -1.05
VPS50-219ENST00000495039 B3GALT4O96024 378 aa8.46□□□□□ -1.06
VPS50-219ENST00000495039 C8AP07357 584 aa8.46□□□□□ -1.06
VPS50-219ENST00000495039 LCE1DQ5T752 114 aa8.46□□□□□ -1.06
VPS50-219ENST00000495039 STK11IPQ8N1F8 1099 aa8.46□□□□□ -1.06
VPS50-219ENST00000495039 TRIM56Q9BRZ2 755 aaKnown RBP8.46□□□□□ -1.06
VPS50-219ENST00000495039 GSX1Q9H4S2 264 aaPredicted RBP8.46□□□□□ -1.06
VPS50-219ENST00000495039 SLC5A6Q9Y289 635 aa8.46□□□□□ -1.06
VPS50-219ENST00000495039 PPP1R15AO75807 674 aaPredicted RBP8.45□□□□□ -1.06
VPS50-219ENST00000495039 C1GALT1Q9NS00 363 aa8.45□□□□□ -1.06
VPS50-219ENST00000495039 DAGLAQ9Y4D2 1042 aa8.45□□□□□ -1.06
VPS50-219ENST00000495039 ECEL1O95672 775 aa8.44□□□□□ -1.06
VPS50-219ENST00000495039 NEFLP07196 543 aa8.44□□□□□ -1.06
VPS50-219ENST00000495039 ZNF211Q13398 564 aaPredicted RBP8.44□□□□□ -1.06
VPS50-219ENST00000495039 OGFOD3Q6PK18 319 aa8.44□□□□□ -1.06
VPS50-219ENST00000495039 SEZ6L2Q6UXD5 910 aa8.44□□□□□ -1.06
VPS50-219ENST00000495039 BCL7CQ8WUZ0 217 aaPredicted RBP8.44□□□□□ -1.06
VPS50-219ENST00000495039 ZNF576Q9H609 170 aa8.44□□□□□ -1.06
VPS50-219ENST00000495039 ANO2Q9NQ90 1003 aa8.44□□□□□ -1.06
VPS50-219ENST00000495039 ARID3CA6NKF2 412 aa8.43□□□□□ -1.06
VPS50-219ENST00000495039 PDE3AQ14432 1141 aa8.43□□□□□ -1.06
VPS50-219ENST00000495039 PLCL1Q15111 1095 aa8.43□□□□□ -1.06
VPS50-219ENST00000495039 KIAA0319Q5VV43 1072 aa8.43□□□□□ -1.06
VPS50-219ENST00000495039 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
VPS50-219ENST00000495039 SYNGAP1Q96PV0 1343 aa8.43□□□□□ -1.06
VPS50-219ENST00000495039 ARID1BQ8NFD5 2236 aaPredicted RBP8.43□□□□□ -1.06
VPS50-219ENST00000495039 BIN1O00499 593 aa8.42□□□□□ -1.06
VPS50-219ENST00000495039 DYNC1LI2O43237 492 aaPredicted RBP8.42□□□□□ -1.06
VPS50-219ENST00000495039 AOC2O75106 756 aa8.42□□□□□ -1.06
VPS50-219ENST00000495039 AP3B2Q13367 1082 aa8.42□□□□□ -1.06
VPS50-219ENST00000495039 CYP27C1Q4G0S4 372 aa8.42□□□□□ -1.06
VPS50-219ENST00000495039 MISP3Q96FF7 219 aa8.42□□□□□ -1.06
VPS50-219ENST00000495039 WDR18Q9BV38 432 aa8.42□□□□□ -1.06
VPS50-219ENST00000495039 PAPLNO95428 1278 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms