RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 GABRQQ9UN88 632 aa19.1■□□□□ 0.65
CHMP2B-205ENST00000494980 SPDYE5A6NIY4 337 aa19.09■□□□□ 0.65
CHMP2B-205ENST00000494980 MAP3K9P80192 1104 aa19.09■□□□□ 0.65
CHMP2B-205ENST00000494980 CFAP100Q494V2 611 aa19.09■□□□□ 0.65
CHMP2B-205ENST00000494980 CDAN1Q8IWY9 1227 aa19.09■□□□□ 0.65
CHMP2B-205ENST00000494980 NUDCQ9Y266 331 aa19.09■□□□□ 0.65
CHMP2B-205ENST00000494980 EIF4G2P78344 907 aaKnown RBP eCLIP19.08■□□□□ 0.64
CHMP2B-205ENST00000494980 SNAPC2Q13487 334 aa19.08■□□□□ 0.64
CHMP2B-205ENST00000494980 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.08■□□□□ 0.64
CHMP2B-205ENST00000494980 MYLIPQ8WY64 445 aa19.08■□□□□ 0.64
CHMP2B-205ENST00000494980 PRMT6Q96LA8 375 aaPredicted RBP19.08■□□□□ 0.64
CHMP2B-205ENST00000494980 CFAP53Q96M91 514 aa19.08■□□□□ 0.64
CHMP2B-205ENST00000494980 F8W031 263 aaPredicted RBP19.07■□□□□ 0.64
CHMP2B-205ENST00000494980 FCGRTP55899 365 aa19.07■□□□□ 0.64
CHMP2B-205ENST00000494980 PLBD2Q8NHP8 589 aa19.07■□□□□ 0.64
CHMP2B-205ENST00000494980 TSPYL4Q9UJ04 414 aa19.07■□□□□ 0.64
CHMP2B-205ENST00000494980 DOCK3Q8IZD9 2030 aa19.07■□□□□ 0.64
CHMP2B-205ENST00000494980 IRF6O14896 467 aa19.06■□□□□ 0.64
CHMP2B-205ENST00000494980 CCT4P50991 539 aaKnown RBP19.06■□□□□ 0.64
CHMP2B-205ENST00000494980 MDM2Q00987 491 aaPredicted RBP19.06■□□□□ 0.64
CHMP2B-205ENST00000494980 CERS5Q8N5B7 392 aa19.06■□□□□ 0.64
CHMP2B-205ENST00000494980 MUC6Q6W4X9 2439 aa19.06■□□□□ 0.64
CHMP2B-205ENST00000494980 SYNGAP1Q96PV0 1343 aa19.05■□□□□ 0.64
CHMP2B-205ENST00000494980 PER1O15534 1290 aaPredicted RBP19.05■□□□□ 0.64
CHMP2B-205ENST00000494980 KLRK1P26718 216 aa19.05■□□□□ 0.64
CHMP2B-205ENST00000494980 ANKLE1Q8NAG6 615 aa19.05■□□□□ 0.64
CHMP2B-205ENST00000494980 NBPF3Q9H094 633 aa19.05■□□□□ 0.64
CHMP2B-205ENST00000494980 SNCAIPQ9Y6H5 919 aa19.05■□□□□ 0.64
CHMP2B-205ENST00000494980 FOSL2P15408 326 aa19.04■□□□□ 0.64
CHMP2B-205ENST00000494980 FLT3LGP49771 235 aa19.04■□□□□ 0.64
CHMP2B-205ENST00000494980 TEPSINQ96N21 525 aa19.04■□□□□ 0.64
CHMP2B-205ENST00000494980 MINPP1Q9UNW1 487 aa19.04■□□□□ 0.64
CHMP2B-205ENST00000494980 PDHXO00330 501 aa19.03■□□□□ 0.64
CHMP2B-205ENST00000494980 TNFAIP1Q13829 316 aa19.03■□□□□ 0.64
CHMP2B-205ENST00000494980 ERO1BQ86YB8 467 aa19.03■□□□□ 0.64
CHMP2B-205ENST00000494980 ZBTB38Q8NAP3 1195 aaPredicted RBP19.03■□□□□ 0.64
CHMP2B-205ENST00000494980 SNX27Q96L92 541 aa19.03■□□□□ 0.64
CHMP2B-205ENST00000494980 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHMP2B-205ENST00000494980 SEMA6BQ9H3T3 888 aa19.03■□□□□ 0.64
CHMP2B-205ENST00000494980 C11orf49Q9H6J7 331 aa19.03■□□□□ 0.64
CHMP2B-205ENST00000494980 MYH3P11055 1940 aa19.02■□□□□ 0.64
CHMP2B-205ENST00000494980 HSP90B1P14625 803 aaKnown RBP19.02■□□□□ 0.64
CHMP2B-205ENST00000494980 PXYLP1Q8TE99 480 aa19.02■□□□□ 0.64
CHMP2B-205ENST00000494980 RBM5P52756 815 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHMP2B-205ENST00000494980 TRIM28Q13263 835 aaKnown RBP19.01■□□□□ 0.63
CHMP2B-205ENST00000494980 PPIL2Q13356 520 aa19.01■□□□□ 0.63
CHMP2B-205ENST00000494980 ANKRD23Q86SG2 305 aa19.01■□□□□ 0.63
CHMP2B-205ENST00000494980 CHPF2Q9P2E5 772 aa19.01■□□□□ 0.63
CHMP2B-205ENST00000494980 PDE8AO60658 829 aa19■□□□□ 0.63
CHMP2B-205ENST00000494980 BCRP11274 1271 aa19■□□□□ 0.63
CHMP2B-205ENST00000494980 SPDYE2Q495Y8 402 aa19■□□□□ 0.63
CHMP2B-205ENST00000494980 CDC5LQ99459 802 aaKnown RBP19■□□□□ 0.63
CHMP2B-205ENST00000494980 TMEM39BQ9GZU3 492 aa19■□□□□ 0.63
CHMP2B-205ENST00000494980 TAOK2Q9UL54 1235 aa19■□□□□ 0.63
CHMP2B-205ENST00000494980 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.99■□□□□ 0.63
CHMP2B-205ENST00000494980 USP38Q8NB14 1042 aa18.99■□□□□ 0.63
CHMP2B-205ENST00000494980 ZKSCAN4Q969J2 545 aaPredicted RBP18.99■□□□□ 0.63
CHMP2B-205ENST00000494980 BSDC1Q9NW68 430 aaPredicted RBP18.99■□□□□ 0.63
CHMP2B-205ENST00000494980 ZNF70Q9UC06 446 aaPredicted RBP18.99■□□□□ 0.63
CHMP2B-205ENST00000494980 JARID2Q92833 1246 aaPredicted RBP18.98■□□□□ 0.63
CHMP2B-205ENST00000494980 WRNIP1Q96S55 665 aa18.98■□□□□ 0.63
CHMP2B-205ENST00000494980 TTYH1Q9H313 450 aaPredicted RBP18.98■□□□□ 0.63
CHMP2B-205ENST00000494980 LEMD3Q9Y2U8 911 aa18.98■□□□□ 0.63
CHMP2B-205ENST00000494980 PFASO15067 1338 aa18.98■□□□□ 0.63
CHMP2B-205ENST00000494980 IRF5Q13568 498 aa18.97■□□□□ 0.63
CHMP2B-205ENST00000494980 PARK7Q99497 189 aaKnown RBP18.97■□□□□ 0.63
CHMP2B-205ENST00000494980 TCP10L2B9ZVM9 353 aa18.96■□□□□ 0.63
CHMP2B-205ENST00000494980 NEFMP07197 916 aa18.96■□□□□ 0.63
CHMP2B-205ENST00000494980 TDRD3Q9H7E2 651 aaKnown RBP18.96■□□□□ 0.63
CHMP2B-205ENST00000494980 CD209Q9NNX6 404 aa18.96■□□□□ 0.63
CHMP2B-205ENST00000494980 TNPO2O14787 897 aaKnown RBP18.95■□□□□ 0.62
CHMP2B-205ENST00000494980 CYP2C8P10632 490 aa18.95■□□□□ 0.62
CHMP2B-205ENST00000494980 PCCAP05165 728 aaPredicted RBP18.94■□□□□ 0.62
CHMP2B-205ENST00000494980 NFE2L2Q16236 605 aa18.94■□□□□ 0.62
CHMP2B-205ENST00000494980 ADAMTS19Q8TE59 1207 aa18.94■□□□□ 0.62
CHMP2B-205ENST00000494980 JAG2Q9Y219 1238 aa18.94■□□□□ 0.62
CHMP2B-205ENST00000494980 MAST2Q6P0Q8 1798 aa18.93■□□□□ 0.62
CHMP2B-205ENST00000494980 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
CHMP2B-205ENST00000494980 KRT24Q2M2I5 525 aa18.93■□□□□ 0.62
CHMP2B-205ENST00000494980 LBHD1Q9BQE6 289 aaPredicted RBP18.93■□□□□ 0.62
CHMP2B-205ENST00000494980 HCN4Q9Y3Q4 1203 aa18.93■□□□□ 0.62
CHMP2B-205ENST00000494980 ARIH1Q9Y4X5 557 aaPredicted RBP18.93■□□□□ 0.62
CHMP2B-205ENST00000494980 CTSWP56202 376 aa18.92■□□□□ 0.62
CHMP2B-205ENST00000494980 PPATQ06203 517 aa18.92■□□□□ 0.62
CHMP2B-205ENST00000494980 MOGSQ13724 837 aa18.92■□□□□ 0.62
CHMP2B-205ENST00000494980 GREM2Q9H772 168 aa18.92■□□□□ 0.62
CHMP2B-205ENST00000494980 KCNJ4P48050 445 aa18.91■□□□□ 0.62
CHMP2B-205ENST00000494980 TNNI2P48788 182 aa18.91■□□□□ 0.62
CHMP2B-205ENST00000494980 LRRC26Q2I0M4 334 aa18.91■□□□□ 0.62
CHMP2B-205ENST00000494980 UHRF1Q96T88 793 aaPredicted RBP18.91■□□□□ 0.62
CHMP2B-205ENST00000494980 OGDHLQ9ULD0 1010 aa18.91■□□□□ 0.62
CHMP2B-205ENST00000494980 AK9Q5TCS8 1911 aa18.91■□□□□ 0.62
CHMP2B-205ENST00000494980 MYO9BQ13459 2157 aa18.91■□□□□ 0.62
CHMP2B-205ENST00000494980 C1QTNF1Q9BXJ1 281 aa18.9■□□□□ 0.62
CHMP2B-205ENST00000494980 KCNH4Q9UQ05 1017 aa18.9■□□□□ 0.62
CHMP2B-205ENST00000494980 A0A1B0GUL6 1792 aa18.9■□□□□ 0.62
CHMP2B-205ENST00000494980 HMGCRP04035 888 aa18.89■□□□□ 0.61
CHMP2B-205ENST00000494980 FKBP1AP62942 108 aaKnown RBP18.89■□□□□ 0.61
CHMP2B-205ENST00000494980 HDGFL1Q5TGJ6 251 aa18.89■□□□□ 0.61
CHMP2B-205ENST00000494980 RIC3Q7Z5B4 369 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms