RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SURF6O75683 361 aaKnown RBP18.18■□□□□ 0.5
ATG4B-224ENST00000494132 MS4A1P11836 297 aa18.18■□□□□ 0.5
ATG4B-224ENST00000494132 TTLL12Q14166 644 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-224ENST00000494132 CEP85Q6P2H3 762 aa18.18■□□□□ 0.5
ATG4B-224ENST00000494132 ZIC5Q96T25 663 aa18.18■□□□□ 0.5
ATG4B-224ENST00000494132 GNL3LQ9NVN8 582 aaKnown RBP18.18■□□□□ 0.5
ATG4B-224ENST00000494132 SERPINA10Q9UK55 444 aa18.18■□□□□ 0.5
ATG4B-224ENST00000494132 AKAP2Q9Y2D5 859 aa18.18■□□□□ 0.5
ATG4B-224ENST00000494132 PRDX5P30044 214 aa18.17■□□□□ 0.5
ATG4B-224ENST00000494132 DEFB129Q9H1M3 183 aa18.17■□□□□ 0.5
ATG4B-224ENST00000494132 ZNF70Q9UC06 446 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-224ENST00000494132 AKAP11Q9UKA4 1901 aa18.17■□□□□ 0.5
ATG4B-224ENST00000494132 OTOFQ9HC10 1997 aa18.17■□□□□ 0.5
ATG4B-224ENST00000494132 UBE2Q2LH0YL09 131 aa18.16■□□□□ 0.5
ATG4B-224ENST00000494132 FOXN1O15353 648 aa18.16■□□□□ 0.5
ATG4B-224ENST00000494132 CACNB3P54284 484 aa18.16■□□□□ 0.5
ATG4B-224ENST00000494132 RASGRF1Q13972 1273 aa18.16■□□□□ 0.5
ATG4B-224ENST00000494132 RGMBQ6NW40 437 aa18.16■□□□□ 0.5
ATG4B-224ENST00000494132 WDR66Q8TBY9 1149 aa18.16■□□□□ 0.5
ATG4B-224ENST00000494132 TEKT1Q969V4 418 aa18.16■□□□□ 0.5
ATG4B-224ENST00000494132 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-224ENST00000494132 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
ATG4B-224ENST00000494132 SSC5DA1L4H1 1573 aa18.16■□□□□ 0.5
ATG4B-224ENST00000494132 TCP10L2B9ZVM9 353 aa18.15■□□□□ 0.5
ATG4B-224ENST00000494132 ZNF157P51786 506 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-224ENST00000494132 DIXDC1Q155Q3 683 aa18.15■□□□□ 0.5
ATG4B-224ENST00000494132 SPDYE2Q495Y8 402 aa18.15■□□□□ 0.5
ATG4B-224ENST00000494132 GORABQ5T7V8 394 aa18.15■□□□□ 0.5
ATG4B-224ENST00000494132 HHIPL1Q96JK4 782 aa18.15■□□□□ 0.5
ATG4B-224ENST00000494132 DENND2AQ9ULE3 1009 aa18.15■□□□□ 0.5
ATG4B-224ENST00000494132 EXOC6BQ9Y2D4 811 aa18.15■□□□□ 0.5
ATG4B-224ENST00000494132 FAM155AB1AL88 458 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-224ENST00000494132 NF2P35240 595 aa18.14■□□□□ 0.49
ATG4B-224ENST00000494132 PI16Q6UXB8 463 aa18.14■□□□□ 0.49
ATG4B-224ENST00000494132 CDAN1Q8IWY9 1227 aa18.14■□□□□ 0.49
ATG4B-224ENST00000494132 WBP1LQ9NX94 342 aa18.14■□□□□ 0.49
ATG4B-224ENST00000494132 RASA3Q14644 834 aa18.13■□□□□ 0.49
ATG4B-224ENST00000494132 TNNI3KQ59H18 835 aa18.13■□□□□ 0.49
ATG4B-224ENST00000494132 NBPF12Q5TAG4 269 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-224ENST00000494132 AIDAQ96BJ3 306 aa18.13■□□□□ 0.49
ATG4B-224ENST00000494132 DBNDD2Q9BQY9 259 aa18.13■□□□□ 0.49
ATG4B-224ENST00000494132 ABCF2Q9UG63 623 aa18.13■□□□□ 0.49
ATG4B-224ENST00000494132 FPGT-TNNI3KV9GXZ4 949 aa18.13■□□□□ 0.49
ATG4B-224ENST00000494132 MAST3O60307 1309 aa18.13■□□□□ 0.49
ATG4B-224ENST00000494132 SEMA3EO15041 775 aa18.12■□□□□ 0.49
ATG4B-224ENST00000494132 LDHBP07195 334 aaKnown RBP18.12■□□□□ 0.49
ATG4B-224ENST00000494132 HDLBPQ00341 1268 aaKnown RBP18.12■□□□□ 0.49
ATG4B-224ENST00000494132 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-224ENST00000494132 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
ATG4B-224ENST00000494132 ZBTB40Q9NUA8 1239 aa18.12■□□□□ 0.49
ATG4B-224ENST00000494132 TSKSQ9UJT2 592 aa18.12■□□□□ 0.49
ATG4B-224ENST00000494132 ANGEL1Q9UNK9 670 aaKnown RBP18.12■□□□□ 0.49
ATG4B-224ENST00000494132 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
ATG4B-224ENST00000494132 SUGT1Q9Y2Z0 365 aa18.12■□□□□ 0.49
ATG4B-224ENST00000494132 APBB1O00213 710 aa18.11■□□□□ 0.49
ATG4B-224ENST00000494132 FKBP1BP68106 108 aa18.11■□□□□ 0.49
ATG4B-224ENST00000494132 MAP2K1Q02750 393 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-224ENST00000494132 COL13A1Q5TAT6 717 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-224ENST00000494132 APOBEC3HQ6NTF7 200 aaKnown RBP18.11■□□□□ 0.49
ATG4B-224ENST00000494132 RASAL3Q86YV0 1011 aa18.11■□□□□ 0.49
ATG4B-224ENST00000494132 ZDHHC15Q96MV8 337 aa18.11■□□□□ 0.49
ATG4B-224ENST00000494132 TMEM39BQ9GZU3 492 aa18.11■□□□□ 0.49
ATG4B-224ENST00000494132 CCDC8Q9H0W5 538 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-224ENST00000494132 TLR7Q9NYK1 1049 aaKnown RBP18.11■□□□□ 0.49
ATG4B-224ENST00000494132 HMG20BQ9P0W2 317 aa18.11■□□□□ 0.49
ATG4B-224ENST00000494132 DAGLAQ9Y4D2 1042 aa18.11■□□□□ 0.49
ATG4B-224ENST00000494132 SALL1Q9NSC2 1324 aa18.11■□□□□ 0.49
ATG4B-224ENST00000494132 CASP8AP2Q9UKL3 1982 aa18.11■□□□□ 0.49
ATG4B-224ENST00000494132 SLC10A3P09131 477 aa18.1■□□□□ 0.49
ATG4B-224ENST00000494132 MAP2K2P36507 400 aa18.1■□□□□ 0.49
ATG4B-224ENST00000494132 MKRN3Q13064 507 aaKnown RBP18.1■□□□□ 0.49
ATG4B-224ENST00000494132 NOGQ13253 232 aa18.1■□□□□ 0.49
ATG4B-224ENST00000494132 HHIPL2Q6UWX4 724 aa18.1■□□□□ 0.49
ATG4B-224ENST00000494132 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
ATG4B-224ENST00000494132 SIRT2Q8IXJ6 389 aa18.1■□□□□ 0.49
ATG4B-224ENST00000494132 SNRKQ9NRH2 765 aa18.1■□□□□ 0.49
ATG4B-224ENST00000494132 PPP2R3BQ9Y5P8 575 aa18.1■□□□□ 0.49
ATG4B-224ENST00000494132 MCAMP43121 646 aa18.09■□□□□ 0.49
ATG4B-224ENST00000494132 KIF23Q02241 960 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-224ENST00000494132 TNFAIP1Q13829 316 aa18.09■□□□□ 0.49
ATG4B-224ENST00000494132 PDE3AQ14432 1141 aa18.09■□□□□ 0.49
ATG4B-224ENST00000494132 TTC39AQ5SRH9 613 aa18.09■□□□□ 0.49
ATG4B-224ENST00000494132 ARMC9Q7Z3E5 817 aa18.09■□□□□ 0.49
ATG4B-224ENST00000494132 SPATA5Q8NB90 893 aa18.09■□□□□ 0.49
ATG4B-224ENST00000494132 CCDC102AQ96A19 550 aa18.09■□□□□ 0.49
ATG4B-224ENST00000494132 GPR108Q9NPR9 543 aa18.09■□□□□ 0.49
ATG4B-224ENST00000494132 MAST2Q6P0Q8 1798 aa18.09■□□□□ 0.49
ATG4B-224ENST00000494132 DOCK2Q92608 1830 aa18.08■□□□□ 0.48
ATG4B-224ENST00000494132 ARID4AP29374 1257 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-224ENST00000494132 LBX1P52954 281 aa18.08■□□□□ 0.48
ATG4B-224ENST00000494132 DZIP1Q86YF9 867 aaKnown RBP18.08■□□□□ 0.48
ATG4B-224ENST00000494132 EAF2Q96CJ1 260 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-224ENST00000494132 TEPSINQ96N21 525 aa18.08■□□□□ 0.48
ATG4B-224ENST00000494132 BEGAINQ9BUH8 593 aa18.08■□□□□ 0.48
ATG4B-224ENST00000494132 IL1RAPL2Q9NP60 686 aa18.08■□□□□ 0.48
ATG4B-224ENST00000494132 TMOD2Q9NZR1 351 aa18.08■□□□□ 0.48
ATG4B-224ENST00000494132 DBNLQ9UJU6 430 aaKnown RBP18.08■□□□□ 0.48
ATG4B-224ENST00000494132 CDK5RAP2Q96SN8 1893 aa18.07■□□□□ 0.48
ATG4B-224ENST00000494132 PDS5AQ29RF7 1337 aaKnown RBP18.07■□□□□ 0.48
ATG4B-224ENST00000494132 HSPA8P11142 646 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms