RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 TM4SF4P48230 202 aa24.12■■□□□ 1.45
CD55-209ENST00000488171 SUPT20HL1Q3ZLR7 823 aa24.12■■□□□ 1.45
CD55-209ENST00000488171 HDAC5Q9UQL6 1122 aa24.12■■□□□ 1.45
CD55-209ENST00000488171 PPP1R12BO60237 982 aaPredicted RBP24.11■■□□□ 1.45
CD55-209ENST00000488171 HDLBPQ00341 1268 aaKnown RBP24.11■■□□□ 1.45
CD55-209ENST00000488171 DGKZQ13574 1117 aa24.11■■□□□ 1.45
CD55-209ENST00000488171 TNFAIP1Q13829 316 aa24.11■■□□□ 1.45
CD55-209ENST00000488171 SPRYD7Q5W111 196 aa24.11■■□□□ 1.45
CD55-209ENST00000488171 PA2G4Q9UQ80 394 aaKnown RBP24.11■■□□□ 1.45
CD55-209ENST00000488171 BCAR3O75815 825 aa24.1■■□□□ 1.45
CD55-209ENST00000488171 CLMNQ96JQ2 1002 aa24.1■■□□□ 1.45
CD55-209ENST00000488171 TNNQ9UQP3 1299 aa24.1■■□□□ 1.45
CD55-209ENST00000488171 MYH13Q9UKX3 1938 aa24.09■■□□□ 1.45
CD55-209ENST00000488171 TRIM27P14373 513 aa24.09■■□□□ 1.45
CD55-209ENST00000488171 TEPSINQ96N21 525 aa24.09■■□□□ 1.45
CD55-209ENST00000488171 COPRSQ9NQ92 184 aa24.09■■□□□ 1.45
CD55-209ENST00000488171 CEP126Q9P2H0 1117 aa24.09■■□□□ 1.45
CD55-209ENST00000488171 TCP10L2B9ZVM9 353 aa24.08■■□□□ 1.45
CD55-209ENST00000488171 USP2O75604 605 aaPredicted RBP24.08■■□□□ 1.45
CD55-209ENST00000488171 ATP2B3Q16720 1220 aa24.08■■□□□ 1.45
CD55-209ENST00000488171 DIEXFQ68CQ4 756 aaKnown RBP24.08■■□□□ 1.45
CD55-209ENST00000488171 CDAN1Q8IWY9 1227 aa24.08■■□□□ 1.45
CD55-209ENST00000488171 TEKT1Q969V4 418 aa24.08■■□□□ 1.45
CD55-209ENST00000488171 SLC10A4Q96EP9 437 aa24.08■■□□□ 1.45
CD55-209ENST00000488171 MRIQ9BWK5 157 aa24.08■■□□□ 1.45
CD55-209ENST00000488171 SUGT1Q9Y2Z0 365 aa24.08■■□□□ 1.45
CD55-209ENST00000488171 UNCXA6NJT0 531 aa24.07■■□□□ 1.44
CD55-209ENST00000488171 IPO8O15397 1037 aaKnown RBP24.07■■□□□ 1.44
CD55-209ENST00000488171 GNAI3P08754 354 aa24.07■■□□□ 1.44
CD55-209ENST00000488171 IL15P40933 162 aaPredicted RBP24.07■■□□□ 1.44
CD55-209ENST00000488171 SREBF2Q12772 1141 aa24.07■■□□□ 1.44
CD55-209ENST00000488171 ATF7IPQ6VMQ6 1270 aa24.07■■□□□ 1.44
CD55-209ENST00000488171 ZDHHC15Q96MV8 337 aa24.07■■□□□ 1.44
CD55-209ENST00000488171 LAMB1P07942 1786 aa24.07■■□□□ 1.44
CD55-209ENST00000488171 TBC1D8O95759 1140 aa24.06■■□□□ 1.44
CD55-209ENST00000488171 FRAT1Q92837 279 aaPredicted RBP24.06■■□□□ 1.44
CD55-209ENST00000488171 OTOFQ9HC10 1997 aa24.06■■□□□ 1.44
CD55-209ENST00000488171 CCDC85CA6NKD9 419 aa24.05■■□□□ 1.44
CD55-209ENST00000488171 IREB2P48200 963 aaKnown RBP24.05■■□□□ 1.44
CD55-209ENST00000488171 HNRNPUQ00839 825 aaKnown RBP eCLIP24.05■■□□□ 1.44
CD55-209ENST00000488171 WDR66Q8TBY9 1149 aa24.05■■□□□ 1.44
CD55-209ENST00000488171 WNK4Q96J92 1243 aa24.05■■□□□ 1.44
CD55-209ENST00000488171 TMEM39BQ9GZU3 492 aa24.05■■□□□ 1.44
CD55-209ENST00000488171 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.05■■□□□ 1.44
CD55-209ENST00000488171 MAST3O60307 1309 aa24.05■■□□□ 1.44
CD55-209ENST00000488171 ZBTB48P10074 688 aaPredicted RBP24.04■■□□□ 1.44
CD55-209ENST00000488171 CACNB3P54284 484 aa24.04■■□□□ 1.44
CD55-209ENST00000488171 MTX1Q13505 466 aa24.04■■□□□ 1.44
CD55-209ENST00000488171 APOBEC3HQ6NTF7 200 aaKnown RBP24.04■■□□□ 1.44
CD55-209ENST00000488171 TNNI2P48788 182 aa24.03■■□□□ 1.44
CD55-209ENST00000488171 HHIPL2Q6UWX4 724 aa24.03■■□□□ 1.44
CD55-209ENST00000488171 SRGAP3O43295 1099 aa24.03■■□□□ 1.44
CD55-209ENST00000488171 GJA5P36382 358 aa24.03■■□□□ 1.44
CD55-209ENST00000488171 PHKA1P46020 1223 aa24.03■■□□□ 1.44
CD55-209ENST00000488171 ANKRD13AQ8IZ07 590 aa24.03■■□□□ 1.44
CD55-209ENST00000488171 CLUAP1Q96AJ1 413 aa24.03■■□□□ 1.44
CD55-209ENST00000488171 MANSC4A6NHS7 340 aaPredicted RBP24.02■■□□□ 1.44
CD55-209ENST00000488171 ADORA1P30542 326 aa24.02■■□□□ 1.44
CD55-209ENST00000488171 ZNF296Q8WUU4 475 aaPredicted RBP24.02■■□□□ 1.44
CD55-209ENST00000488171 CFHR5Q9BXR6 569 aa24.02■■□□□ 1.44
CD55-209ENST00000488171 GNL3LQ9NVN8 582 aaKnown RBP24.02■■□□□ 1.44
CD55-209ENST00000488171 NOM1Q5C9Z4 860 aaKnown RBP24.01■■□□□ 1.43
CD55-209ENST00000488171 R3HDMLQ9H3Y0 253 aa24.01■■□□□ 1.43
CD55-209ENST00000488171 ZBTB22O15209 634 aa24■■□□□ 1.43
CD55-209ENST00000488171 PRDX5P30044 214 aa24■■□□□ 1.43
CD55-209ENST00000488171 INHBEP58166 350 aa24■■□□□ 1.43
CD55-209ENST00000488171 FKBP1CQ5VVH2 108 aa24■■□□□ 1.43
CD55-209ENST00000488171 PPP1R3FQ6ZSY5 799 aaPredicted RBP24■■□□□ 1.43
CD55-209ENST00000488171 CTU1Q7Z7A3 348 aaKnown RBP24■■□□□ 1.43
CD55-209ENST00000488171 IFNL1Q8IU54 200 aa24■■□□□ 1.43
CD55-209ENST00000488171 SALL1Q9NSC2 1324 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 GPR25O00155 361 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 SEMA3EO15041 775 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 GNAI2P04899 355 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 TIMM10P62072 90 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 CCDC102BQ68D86 513 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 FAM83AQ86UY5 434 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 TMEM57Q8N5G2 664 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 ELP3Q9H9T3 547 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 TMOD2Q9NZR1 351 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 DENND2AQ9ULE3 1009 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 DAGLAQ9Y4D2 1042 aa23.99■■□□□ 1.43
CD55-209ENST00000488171 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.99■■□□□ 1.43
CD55-209ENST00000488171 IGF2BP3O00425 579 aaKnown RBP eCLIP23.98■■□□□ 1.43
CD55-209ENST00000488171 TFCP2Q12800 502 aa23.98■■□□□ 1.43
CD55-209ENST00000488171 DIXDC1Q155Q3 683 aa23.98■■□□□ 1.43
CD55-209ENST00000488171 ZKSCAN2Q63HK3 967 aa23.98■■□□□ 1.43
CD55-209ENST00000488171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.98■■□□□ 1.43
CD55-209ENST00000488171 ALDH1A1P00352 501 aa23.97■■□□□ 1.43
CD55-209ENST00000488171 LDHBP07195 334 aaKnown RBP23.97■■□□□ 1.43
CD55-209ENST00000488171 PNMA6EA0A0J9YXQ4 647 aa23.96■■□□□ 1.43
CD55-209ENST00000488171 A0A1B0GUL7 405 aa23.96■■□□□ 1.43
CD55-209ENST00000488171 VGLL4Q14135 290 aa23.96■■□□□ 1.43
CD55-209ENST00000488171 OPTNQ96CV9 577 aa23.96■■□□□ 1.43
CD55-209ENST00000488171 RPAP1Q9BWH6 1393 aaPredicted RBP23.96■■□□□ 1.43
CD55-209ENST00000488171 MAP3K9P80192 1104 aa23.95■■□□□ 1.42
CD55-209ENST00000488171 RASGRF1Q13972 1273 aa23.95■■□□□ 1.42
CD55-209ENST00000488171 CDC42EP5Q6NZY7 148 aa23.95■■□□□ 1.42
CD55-209ENST00000488171 CNKSR2Q8WXI2 1034 aa23.95■■□□□ 1.42
CD55-209ENST00000488171 XAGE2Q96GT9 111 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms