RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 ZNF521Q96K83 1311 aa23.62■■□□□ 1.37
GMDS-205ENST00000486793 TESPA1A2RU30 521 aaPredicted RBP23.62■■□□□ 1.37
GMDS-205ENST00000486793 ZEB1P37275 1124 aaPredicted RBP23.62■■□□□ 1.37
GMDS-205ENST00000486793 CHAF1AQ13111 956 aaPredicted RBP23.62■■□□□ 1.37
GMDS-205ENST00000486793 CRHR2Q13324 411 aa23.62■■□□□ 1.37
GMDS-205ENST00000486793 METTL24Q5JXM2 366 aa23.62■■□□□ 1.37
GMDS-205ENST00000486793 OTOP1Q7RTM1 612 aa23.62■■□□□ 1.37
GMDS-205ENST00000486793 TMEM39BQ9GZU3 492 aa23.62■■□□□ 1.37
GMDS-205ENST00000486793 CAVIN4Q5BKX8 364 aa23.61■■□□□ 1.37
GMDS-205ENST00000486793 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.61■■□□□ 1.37
GMDS-205ENST00000486793 OPTNQ96CV9 577 aa23.61■■□□□ 1.37
GMDS-205ENST00000486793 FRAT2O75474 233 aaPredicted RBP23.6■■□□□ 1.37
GMDS-205ENST00000486793 PDE8BO95263 885 aa23.6■■□□□ 1.37
GMDS-205ENST00000486793 KLHDC4Q8TBB5 520 aa23.6■■□□□ 1.37
GMDS-205ENST00000486793 TNNI2P48788 182 aa23.59■■□□□ 1.37
GMDS-205ENST00000486793 BCAMP50895 628 aa23.59■■□□□ 1.37
GMDS-205ENST00000486793 PRPF38BQ5VTL8 546 aaKnown RBP23.59■■□□□ 1.37
GMDS-205ENST00000486793 VGLL2Q8N8G2 317 aa23.59■■□□□ 1.37
GMDS-205ENST00000486793 CNKSR2Q8WXI2 1034 aa23.59■■□□□ 1.37
GMDS-205ENST00000486793 MS4A4AQ96JQ5 239 aa23.59■■□□□ 1.37
GMDS-205ENST00000486793 CACNA1FO60840 1977 aa23.59■■□□□ 1.37
GMDS-205ENST00000486793 MAP3K9P80192 1104 aa23.58■■□□□ 1.37
GMDS-205ENST00000486793 HDLBPQ00341 1268 aaKnown RBP23.58■■□□□ 1.37
GMDS-205ENST00000486793 CD99L2Q8TCZ2 262 aa23.58■■□□□ 1.37
GMDS-205ENST00000486793 TBC1D22AQ8WUA7 517 aa23.58■■□□□ 1.37
GMDS-205ENST00000486793 ERO1AQ96HE7 468 aa23.58■■□□□ 1.37
GMDS-205ENST00000486793 USP44Q9H0E7 712 aa23.58■■□□□ 1.37
GMDS-205ENST00000486793 SSH1Q8WYL5 1049 aa23.57■■□□□ 1.36
GMDS-205ENST00000486793 PTPRCP08575 1304 aa23.57■■□□□ 1.36
GMDS-205ENST00000486793 CACNB3P54284 484 aa23.56■■□□□ 1.36
GMDS-205ENST00000486793 SP3Q02447 781 aa23.56■■□□□ 1.36
GMDS-205ENST00000486793 VGLL4Q14135 290 aa23.56■■□□□ 1.36
GMDS-205ENST00000486793 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.56■■□□□ 1.367e-6■■■□□ 14.8
GMDS-205ENST00000486793 BRI3BPQ8WY22 251 aa23.56■■□□□ 1.36
GMDS-205ENST00000486793 TEKT1Q969V4 418 aa23.56■■□□□ 1.36
GMDS-205ENST00000486793 PTPN22Q9Y2R2 807 aa23.56■■□□□ 1.36
GMDS-205ENST00000486793 MRIQ9BWK5 157 aa23.55■■□□□ 1.36
GMDS-205ENST00000486793 EFCC1Q9HA90 598 aa23.55■■□□□ 1.36
GMDS-205ENST00000486793 CAP1Q01518 475 aa23.54■■□□□ 1.36
GMDS-205ENST00000486793 INTS3Q68E01 1043 aaKnown RBP23.54■■□□□ 1.36
GMDS-205ENST00000486793 CSADQ9Y600 493 aa23.54■■□□□ 1.36
GMDS-205ENST00000486793 CCL15-CCL14A0A0B4J2E2 113 aa23.53■■□□□ 1.36
GMDS-205ENST00000486793 E9PSI1 815 aa23.53■■□□□ 1.36
GMDS-205ENST00000486793 FGFR2P21802 821 aa23.53■■□□□ 1.36
GMDS-205ENST00000486793 GTF2A2P52657 109 aa23.53■■□□□ 1.36
GMDS-205ENST00000486793 CCL15Q16663 113 aa23.53■■□□□ 1.36
GMDS-205ENST00000486793 APOBEC3HQ6NTF7 200 aaKnown RBP23.53■■□□□ 1.36
GMDS-205ENST00000486793 OTUD5Q96G74 571 aa23.53■■□□□ 1.36
GMDS-205ENST00000486793 ZDHHC15Q96MV8 337 aa23.53■■□□□ 1.36
GMDS-205ENST00000486793 HTTP42858 3142 aa23.53■■□□□ 1.36
GMDS-205ENST00000486793 A0A1B0GUL6 1792 aa23.52■■□□□ 1.36
GMDS-205ENST00000486793 POTEFA5A3E0 1075 aa23.52■■□□□ 1.36
GMDS-205ENST00000486793 IFIT1P09914 478 aaKnown RBP23.52■■□□□ 1.36
GMDS-205ENST00000486793 PUM3Q15397 648 aaKnown RBP23.52■■□□□ 1.36
GMDS-205ENST00000486793 RFX5P48382 616 aaPredicted RBP23.51■■□□□ 1.35
GMDS-205ENST00000486793 FAM43AQ8N2R8 423 aa23.51■■□□□ 1.35
GMDS-205ENST00000486793 ZFYVE28Q9HCC9 887 aa23.51■■□□□ 1.35
GMDS-205ENST00000486793 TMOD2Q9NZR1 351 aa23.51■■□□□ 1.35
GMDS-205ENST00000486793 SUGT1Q9Y2Z0 365 aa23.51■■□□□ 1.35
GMDS-205ENST00000486793 EYA2O00167 538 aa23.5■■□□□ 1.35
GMDS-205ENST00000486793 SLFN5Q08AF3 891 aa23.5■■□□□ 1.35
GMDS-205ENST00000486793 TAF1CQ15572 869 aaPredicted RBP23.5■■□□□ 1.35
GMDS-205ENST00000486793 FKBP1CQ5VVH2 108 aa23.5■■□□□ 1.35
GMDS-205ENST00000486793 HHIPL2Q6UWX4 724 aa23.5■■□□□ 1.35
GMDS-205ENST00000486793 FAM83AQ86UY5 434 aa23.5■■□□□ 1.35
GMDS-205ENST00000486793 ZKSCAN4Q969J2 545 aaPredicted RBP23.5■■□□□ 1.35
GMDS-205ENST00000486793 KIF16BQ96L93 1317 aa23.5■■□□□ 1.35
GMDS-205ENST00000486793 SPDYE5A6NIY4 337 aa23.49■■□□□ 1.35
GMDS-205ENST00000486793 LPIN2Q92539 896 aa23.49■■□□□ 1.35
GMDS-205ENST00000486793 ARMC5Q96C12 935 aa23.49■■□□□ 1.35
GMDS-205ENST00000486793 WRNIP1Q96S55 665 aa23.49■■□□□ 1.35
GMDS-205ENST00000486793 SNCAIPQ9Y6H5 919 aa23.49■■□□□ 1.35
GMDS-205ENST00000486793 ERO1BQ86YB8 467 aa23.48■■□□□ 1.35
GMDS-205ENST00000486793 MAST3O60307 1309 aa23.48■■□□□ 1.35
GMDS-205ENST00000486793 SLC5A1P13866 664 aa23.47■■□□□ 1.35
GMDS-205ENST00000486793 ATG9AQ7Z3C6 839 aa23.47■■□□□ 1.35
GMDS-205ENST00000486793 HOOK2Q96ED9 719 aa23.47■■□□□ 1.35
GMDS-205ENST00000486793 CETPP11597 493 aa23.46■■□□□ 1.35
GMDS-205ENST00000486793 ARHGEF6Q15052 776 aa23.46■■□□□ 1.35
GMDS-205ENST00000486793 MIGA2Q7L4E1 593 aa23.46■■□□□ 1.35
GMDS-205ENST00000486793 WDR66Q8TBY9 1149 aa23.46■■□□□ 1.35
GMDS-205ENST00000486793 CDCA7LQ96GN5 454 aa23.46■■□□□ 1.35
GMDS-205ENST00000486793 PCDH10Q9P2E7 1040 aa23.46■■□□□ 1.35
GMDS-205ENST00000486793 ECM29Q5VYK3 1845 aa23.45■■□□□ 1.34
GMDS-205ENST00000486793 IRF6O14896 467 aa23.45■■□□□ 1.34
GMDS-205ENST00000486793 ALDH1L2Q3SY69 923 aa23.45■■□□□ 1.34
GMDS-205ENST00000486793 CENPFP49454 3210 aa23.44■■□□□ 1.34
GMDS-205ENST00000486793 BTBD19C9JJ37 291 aa23.44■■□□□ 1.34
GMDS-205ENST00000486793 WDHD1O75717 1129 aaPredicted RBP23.44■■□□□ 1.34
GMDS-205ENST00000486793 EN2P19622 333 aaPredicted RBP23.44■■□□□ 1.34
GMDS-205ENST00000486793 SNAPC2Q13487 334 aa23.44■■□□□ 1.34
GMDS-205ENST00000486793 DCAF15Q66K64 600 aa23.44■■□□□ 1.34
GMDS-205ENST00000486793 SMC4Q9NTJ3 1288 aa23.44■■□□□ 1.34
GMDS-205ENST00000486793 FAM151AQ8WW52 585 aa23.43■■□□□ 1.34
GMDS-205ENST00000486793 ZNF341Q9BYN7 854 aa23.43■■□□□ 1.34
GMDS-205ENST00000486793 SIL1Q9H173 461 aa23.43■■□□□ 1.34
GMDS-205ENST00000486793 PTCH2Q9Y6C5 1203 aa23.43■■□□□ 1.34
GMDS-205ENST00000486793 TLR2O60603 784 aa23.42■■□□□ 1.34
GMDS-205ENST00000486793 PPIL2Q13356 520 aa23.42■■□□□ 1.34
GMDS-205ENST00000486793 DIXDC1Q155Q3 683 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms