RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ABCF2Q9UG63 623 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 HPS5Q9UPZ3 1129 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 TRIOBPQ9H2D6 2365 aa8.41□□□□□ -1.06
UBR4-214ENST00000486515 KIF13BQ9NQT8 1826 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 ARFGEF1Q9Y6D6 1849 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 IQCA1LA6NCM1 817 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 GOLIM4O00461 696 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 ECE2O60344 883 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 IGSF3O75054 1194 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 ZFYP08048 801 aaPredicted RBP8.4□□□□□ -1.06
UBR4-214ENST00000486515 PDE4AP27815 886 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 MFAP1P55081 439 aaKnown RBP8.4□□□□□ -1.06
UBR4-214ENST00000486515 GSTO1P78417 241 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 TNIP1Q15025 636 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 DOK7Q18PE1 504 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 EAPPQ56P03 285 aaPredicted RBP8.4□□□□□ -1.06
UBR4-214ENST00000486515 TSHZ3Q63HK5 1081 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 TTLL5Q6EMB2 1281 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 OLFM4Q6UX06 510 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 FBXO33Q7Z6M2 555 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 DZIP1Q86YF9 867 aaKnown RBP8.4□□□□□ -1.06
UBR4-214ENST00000486515 OTUD7AQ8TE49 926 aaPredicted RBP8.4□□□□□ -1.06
UBR4-214ENST00000486515 C7orf43Q8WVR3 580 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 HAUS7Q99871 368 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 RAI14Q9P0K7 980 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 IQSEC3Q9UPP2 1182 aaPredicted RBP8.4□□□□□ -1.06
UBR4-214ENST00000486515 CLEC11AQ9Y240 323 aa8.4□□□□□ -1.06
UBR4-214ENST00000486515 MAST3O60307 1309 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 LTBP3Q9NS15 1303 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 USP17L3A6NCW0 530 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 USP17L4A6NCW7 530 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 IDH1O75874 414 aaKnown RBP8.39□□□□□ -1.07
UBR4-214ENST00000486515 DDNO94850 711 aaPredicted RBP8.39□□□□□ -1.07
UBR4-214ENST00000486515 MAP4K4O95819 1239 aaPredicted RBP8.39□□□□□ -1.07
UBR4-214ENST00000486515 LDHBP07195 334 aaKnown RBP8.39□□□□□ -1.07
UBR4-214ENST00000486515 LDHCP07864 332 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 IL1R1P14778 569 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 ZAP70P43403 619 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 GTF2IP78347 998 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 TMED8Q6PL24 325 aaPredicted RBP8.39□□□□□ -1.07
UBR4-214ENST00000486515 KIAA1211Q6ZU35 1233 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 USP17L1Q7RTZ2 530 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 TICAM2Q86XR7 235 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 OGFOD1Q8N543 542 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 TAF1DQ9H5J8 278 aaPredicted RBP8.39□□□□□ -1.07
UBR4-214ENST00000486515 DBNDD1Q9H9R9 158 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 SNRKQ9NRH2 765 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 HDAC9Q9UKV0 1011 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 ZNRF3Q9ULT6 936 aa8.39□□□□□ -1.07
UBR4-214ENST00000486515 SBF1O95248 1867 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 DLEC1Q9Y238 1755 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 PDS5AQ29RF7 1337 aaKnown RBP8.38□□□□□ -1.07
UBR4-214ENST00000486515 MYO3BQ8WXR4 1341 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 CDC45O75419 566 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 SDSP20132 328 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 PLA2G5P39877 138 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 MCAMP43121 646 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 RASGRF1Q13972 1273 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 STRIP1Q5VSL9 837 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 MAP1SQ66K74 1059 aaPredicted RBP8.38□□□□□ -1.07
UBR4-214ENST00000486515 KBTBD3Q8NAB2 608 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 TDRD7Q8NHU6 1098 aaKnown RBP8.38□□□□□ -1.07
UBR4-214ENST00000486515 PI4K2BQ8TCG2 481 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 DDRGK1Q96HY6 314 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 SNX27Q96L92 541 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 HMG20BQ9P0W2 317 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 SUGT1Q9Y2Z0 365 aa8.38□□□□□ -1.07
UBR4-214ENST00000486515 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.38□□□□□ -1.07
UBR4-214ENST00000486515 BRCA1P38398 1863 aaKnown RBP8.37□□□□□ -1.07
UBR4-214ENST00000486515 BAG3O95817 575 aa8.37□□□□□ -1.07
UBR4-214ENST00000486515 KLRK1P26718 216 aa8.37□□□□□ -1.07
UBR4-214ENST00000486515 RBM5P52756 815 aaKnown RBP eCLIP8.37□□□□□ -1.07
UBR4-214ENST00000486515 MFSD14BQ5SR56 506 aa8.37□□□□□ -1.07
UBR4-214ENST00000486515 SLC9C2Q5TAH2 1124 aa8.37□□□□□ -1.07
UBR4-214ENST00000486515 CIAPIN1Q6FI81 312 aa8.37□□□□□ -1.07
UBR4-214ENST00000486515 NAA16Q6N069 864 aaPredicted RBP8.37□□□□□ -1.07
UBR4-214ENST00000486515 CTU1Q7Z7A3 348 aaKnown RBP8.37□□□□□ -1.07
UBR4-214ENST00000486515 SLC51AQ86UW1 340 aa8.37□□□□□ -1.07
UBR4-214ENST00000486515 TXNRD3Q86VQ6 643 aa8.37□□□□□ -1.07
UBR4-214ENST00000486515 CERS3Q8IU89 383 aa8.37□□□□□ -1.07
UBR4-214ENST00000486515 FAM122AQ96E09 287 aa8.37□□□□□ -1.07
UBR4-214ENST00000486515 SALL3Q9BXA9 1300 aa8.36□□□□□ -1.07
UBR4-214ENST00000486515 RAD17O75943 681 aa8.36□□□□□ -1.07
UBR4-214ENST00000486515 REC8O95072 547 aa8.36□□□□□ -1.07
UBR4-214ENST00000486515 CYP2E1P05181 493 aaPredicted RBP8.36□□□□□ -1.07
UBR4-214ENST00000486515 GSPT1P15170 499 aaKnown RBP8.36□□□□□ -1.07
UBR4-214ENST00000486515 MMP14P50281 582 aa8.36□□□□□ -1.07
UBR4-214ENST00000486515 FKBP1AP62942 108 aaKnown RBP8.36□□□□□ -1.07
UBR4-214ENST00000486515 SKAP1Q86WV1 359 aa8.36□□□□□ -1.07
UBR4-214ENST00000486515 JAG2Q9Y219 1238 aa8.36□□□□□ -1.07
UBR4-214ENST00000486515 GJA3Q9Y6H8 435 aa8.36□□□□□ -1.07
UBR4-214ENST00000486515 SALL1Q9NSC2 1324 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 LRRC37AA6NMS7 1700 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 WTIPA6NIX2 430 aaPredicted RBP8.35□□□□□ -1.07
UBR4-214ENST00000486515 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
UBR4-214ENST00000486515 NFKBIEO00221 500 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 ZBTB22O15209 634 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 RNF113AO15541 343 aaKnown RBP8.35□□□□□ -1.07
UBR4-214ENST00000486515 MYO1BO43795 1136 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms