RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 TRPM1Q7Z4N2 1603 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 POLD1P28340 1107 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 CEBPAP49715 358 aaPredicted RBP9.89□□□□□ -0.83
GABRE-209ENST00000486255 SNX16P57768 344 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 UBXN1Q04323 297 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 CCDC14Q49A88 953 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 PRR16Q569H4 304 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 KCNG4Q8TDN1 519 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 CCDC85AQ96PX6 553 aaPredicted RBP9.89□□□□□ -0.83
GABRE-209ENST00000486255 TMOD2Q9NZR1 351 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 GOLGA6CA6NDK9 693 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 FCHSD2O94868 740 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 GOLGA6DP0CG33 693 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 ALDH1L2Q3SY69 923 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 MCUR1Q96AQ8 359 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 GOLGA6AQ9NYA3 693 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 LAMC1P11047 1609 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 CRCPO75575 148 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 AP1ARQ63HQ0 302 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 BICDL1Q6ZP65 573 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 CCDC26Q8TAB7 109 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 MRPS27Q92552 414 aaKnown RBP9.88□□□□□ -0.83
GABRE-209ENST00000486255 NEK1Q96PY6 1258 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 SYNMO15061 1565 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 CCDC62Q6P9F0 684 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 CCT6BQ92526 530 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 CCDC8Q9H0W5 538 aaPredicted RBP9.88□□□□□ -0.83
GABRE-209ENST00000486255 RIMBP3CA6NJZ7 1639 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 RIMBP3BA6NNM3 1639 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 RIMBP3Q9UFD9 1639 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 A6NNZ2 444 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 PRIM1P49642 420 aaKnown RBP9.88□□□□□ -0.83
GABRE-209ENST00000486255 ARID5AQ03989 594 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 UAP1Q16222 522 aaPredicted RBP9.88□□□□□ -0.83
GABRE-209ENST00000486255 TUBB8Q3ZCM7 444 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 SEL1L2Q5TEA6 688 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 WAPLQ7Z5K2 1190 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 MIER3Q7Z3K6 550 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 ARHGAP24Q8N264 748 aa9.88□□□□□ -0.83
GABRE-209ENST00000486255 TYRO3Q06418 890 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 RPAINQ86UA6 219 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 NEK11Q8NG66 645 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 TMX3Q96JJ7 454 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 PPP1R9BQ96SB3 815 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 ABCC11Q96J66 1382 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 NFE2L2Q16236 605 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 ANKRD24Q8TF21 1146 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 HMG20BQ9P0W2 317 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 C20orf194Q5TEA3 1177 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 CCDC42Q96M95 316 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 RNF17Q9BXT8 1623 aaKnown RBP9.87□□□□□ -0.83
GABRE-209ENST00000486255 E9PCH4 1651 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 ERVK-7P63135 1459 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 SLC5A1P13866 664 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 PLCB3Q01970 1234 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 CALCOCO2Q13137 446 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 KAT14Q9H8E8 782 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 TACC3Q9Y6A5 838 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 POLR3AO14802 1390 aaPredicted RBP9.87□□□□□ -0.83
GABRE-209ENST00000486255 HSPA1LP34931 641 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 SH3BGRP55822 239 aaPredicted RBP9.87□□□□□ -0.83
GABRE-209ENST00000486255 MYD88Q99836 296 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 MTUS1Q9ULD2 1270 aa9.87□□□□□ -0.83
GABRE-209ENST00000486255 ERCC5P28715 1186 aaPredicted RBP9.86□□□□□ -0.83
GABRE-209ENST00000486255 USP37Q86T82 979 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 RAB11FIP4Q86YS3 637 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 GSDMBQ8TAX9 411 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 RAB3IPQ96QF0 476 aaPredicted RBP9.86□□□□□ -0.83
GABRE-209ENST00000486255 MAP3K4Q9Y6R4 1608 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 ZC3H13Q5T200 1668 aaKnown RBP9.86□□□□□ -0.83
GABRE-209ENST00000486255 PSMA7O14818 248 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 TTC22Q5TAA0 569 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 NCOA7Q8NI08 942 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 AMOTL2Q9Y2J4 779 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 GNAT3A8MTJ3 354 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 TUBB2AQ13885 445 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 MUM1Q2TAK8 710 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 GPR161Q8N6U8 529 aaKnown RBP9.86□□□□□ -0.83
GABRE-209ENST00000486255 TUBB2BQ9BVA1 445 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 PFDN4Q9NQP4 134 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 SAMM50Q9Y512 469 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 FAM13AO94988 1023 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 TMPOP42166 694 aaKnown RBP9.86□□□□□ -0.83
GABRE-209ENST00000486255 CLUL1Q15846 466 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 DUSP27Q5VZP5 1158 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 RUFY3Q7L099 469 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 SDCCAG8Q86SQ7 713 aaPredicted RBP9.86□□□□□ -0.83
GABRE-209ENST00000486255 UTP14AQ9BVJ6 771 aaKnown RBP9.86□□□□□ -0.83
GABRE-209ENST00000486255 DDX21Q9NR30 783 aaKnown RBP eCLIP9.86□□□□□ -0.83
GABRE-209ENST00000486255 IFNKQ9P0W0 207 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 UTP11Q9Y3A2 253 aaKnown RBP9.86□□□□□ -0.83
GABRE-209ENST00000486255 ZFYVE9O95405 1425 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 BMP15O95972 392 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 ZBTB17Q13105 803 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 ERMNQ8TAM6 284 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 TRIM4Q9C037 500 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 RABEP2Q9H5N1 569 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 VAT1LQ9HCJ6 419 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 DACT1Q9NYF0 836 aa9.86□□□□□ -0.83
GABRE-209ENST00000486255 BICDL2A1A5D9 508 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms