RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 HNRNPUQ00839 825 aaKnown RBP eCLIP19.79■□□□□ 0.76
SIK3-211ENST00000485363 RASA3Q14644 834 aa19.79■□□□□ 0.76
SIK3-211ENST00000485363 TDRD3Q9H7E2 651 aaKnown RBP19.79■□□□□ 0.76
SIK3-211ENST00000485363 CEP126Q9P2H0 1117 aa19.79■□□□□ 0.76
SIK3-211ENST00000485363 IL15P40933 162 aaPredicted RBP19.78■□□□□ 0.76
SIK3-211ENST00000485363 GRIK5Q16478 980 aa19.78■□□□□ 0.76
SIK3-211ENST00000485363 MAP3K11Q16584 847 aa19.78■□□□□ 0.76
SIK3-211ENST00000485363 FRAT1Q92837 279 aaPredicted RBP19.78■□□□□ 0.76
SIK3-211ENST00000485363 FZD1Q9UP38 647 aa19.78■□□□□ 0.76
SIK3-211ENST00000485363 SSC5DA1L4H1 1573 aa19.78■□□□□ 0.76
SIK3-211ENST00000485363 MAST3O60307 1309 aa19.77■□□□□ 0.76
SIK3-211ENST00000485363 BCAR3O75815 825 aa19.77■□□□□ 0.76
SIK3-211ENST00000485363 TRIM27P14373 513 aa19.77■□□□□ 0.76
SIK3-211ENST00000485363 ATP2B3Q16720 1220 aa19.77■□□□□ 0.76
SIK3-211ENST00000485363 NBPF12Q5TAG4 269 aaPredicted RBP19.77■□□□□ 0.76
SIK3-211ENST00000485363 ATF7IPQ6VMQ6 1270 aa19.77■□□□□ 0.76
SIK3-211ENST00000485363 TEKT1Q969V4 418 aa19.77■□□□□ 0.76
SIK3-211ENST00000485363 COPRSQ9NQ92 184 aa19.77■□□□□ 0.76
SIK3-211ENST00000485363 SUGT1Q9Y2Z0 365 aa19.77■□□□□ 0.76
SIK3-211ENST00000485363 UNCXA6NJT0 531 aa19.76■□□□□ 0.75
SIK3-211ENST00000485363 TNNI2P48788 182 aa19.76■□□□□ 0.75
SIK3-211ENST00000485363 SREBF2Q12772 1141 aa19.76■□□□□ 0.75
SIK3-211ENST00000485363 MKRN3Q13064 507 aaKnown RBP19.76■□□□□ 0.75
SIK3-211ENST00000485363 MRIQ9BWK5 157 aa19.76■□□□□ 0.75
SIK3-211ENST00000485363 PA2G4Q9UQ80 394 aaKnown RBP19.76■□□□□ 0.75
SIK3-211ENST00000485363 TM4SF4P48230 202 aa19.75■□□□□ 0.75
SIK3-211ENST00000485363 SPRYD7Q5W111 196 aa19.75■□□□□ 0.75
SIK3-211ENST00000485363 WDR66Q8TBY9 1149 aa19.75■□□□□ 0.75
SIK3-211ENST00000485363 SLC10A4Q96EP9 437 aa19.75■□□□□ 0.75
SIK3-211ENST00000485363 GNL3LQ9NVN8 582 aaKnown RBP19.75■□□□□ 0.75
SIK3-211ENST00000485363 TCP10L2B9ZVM9 353 aa19.74■□□□□ 0.75
SIK3-211ENST00000485363 SRGAP3O43295 1099 aa19.74■□□□□ 0.75
SIK3-211ENST00000485363 IREB2P48200 963 aaKnown RBP19.74■□□□□ 0.75
SIK3-211ENST00000485363 DGKZQ13574 1117 aa19.74■□□□□ 0.75
SIK3-211ENST00000485363 ZDHHC15Q96MV8 337 aa19.74■□□□□ 0.75
SIK3-211ENST00000485363 MCOLN1Q9GZU1 580 aa19.74■□□□□ 0.75
SIK3-211ENST00000485363 USP2O75604 605 aaPredicted RBP19.73■□□□□ 0.75
SIK3-211ENST00000485363 MTX1Q13505 466 aa19.73■□□□□ 0.75
SIK3-211ENST00000485363 ZKSCAN2Q63HK3 967 aa19.73■□□□□ 0.75
SIK3-211ENST00000485363 CLUAP1Q96AJ1 413 aa19.73■□□□□ 0.75
SIK3-211ENST00000485363 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.73■□□□□ 0.75
SIK3-211ENST00000485363 TNNQ9UQP3 1299 aa19.73■□□□□ 0.75
SIK3-211ENST00000485363 SEMA3EO15041 775 aa19.72■□□□□ 0.75
SIK3-211ENST00000485363 GNAI2P04899 355 aa19.72■□□□□ 0.75
SIK3-211ENST00000485363 ZBTB48P10074 688 aaPredicted RBP19.72■□□□□ 0.75
SIK3-211ENST00000485363 HHIPL2Q6UWX4 724 aa19.72■□□□□ 0.75
SIK3-211ENST00000485363 ANKRD13AQ8IZ07 590 aa19.72■□□□□ 0.75
SIK3-211ENST00000485363 CLMNQ96JQ2 1002 aa19.72■□□□□ 0.75
SIK3-211ENST00000485363 TEPSINQ96N21 525 aa19.72■□□□□ 0.75
SIK3-211ENST00000485363 TMOD2Q9NZR1 351 aa19.72■□□□□ 0.75
SIK3-211ENST00000485363 MANSC4A6NHS7 340 aaPredicted RBP19.71■□□□□ 0.75
SIK3-211ENST00000485363 TMEM39BQ9GZU3 492 aa19.71■□□□□ 0.75
SIK3-211ENST00000485363 CCDC85CA6NKD9 419 aa19.7■□□□□ 0.74
SIK3-211ENST00000485363 TBC1D8O95759 1140 aa19.7■□□□□ 0.74
SIK3-211ENST00000485363 PHKA1P46020 1223 aa19.7■□□□□ 0.74
SIK3-211ENST00000485363 INHBEP58166 350 aa19.7■□□□□ 0.74
SIK3-211ENST00000485363 APOBEC3HQ6NTF7 200 aaKnown RBP19.7■□□□□ 0.74
SIK3-211ENST00000485363 WNK4Q96J92 1243 aa19.7■□□□□ 0.74
SIK3-211ENST00000485363 DENND2AQ9ULE3 1009 aa19.7■□□□□ 0.74
SIK3-211ENST00000485363 ZBTB22O15209 634 aa19.69■□□□□ 0.74
SIK3-211ENST00000485363 CACNB3P54284 484 aa19.69■□□□□ 0.74
SIK3-211ENST00000485363 FKBP1CQ5VVH2 108 aa19.69■□□□□ 0.74
SIK3-211ENST00000485363 CDAN1Q8IWY9 1227 aa19.69■□□□□ 0.74
SIK3-211ENST00000485363 TMEM57Q8N5G2 664 aa19.69■□□□□ 0.74
SIK3-211ENST00000485363 AKAP2Q9Y2D5 859 aa19.69■□□□□ 0.74
SIK3-211ENST00000485363 OTOFQ9HC10 1997 aa19.69■□□□□ 0.74
SIK3-211ENST00000485363 LAMB1P07942 1786 aa19.69■□□□□ 0.74
SIK3-211ENST00000485363 ALDH1A1P00352 501 aa19.68■□□□□ 0.74
SIK3-211ENST00000485363 LDHBP07195 334 aaKnown RBP19.68■□□□□ 0.74
SIK3-211ENST00000485363 ADORA1P30542 326 aa19.68■□□□□ 0.74
SIK3-211ENST00000485363 CCDC102BQ68D86 513 aa19.68■□□□□ 0.74
SIK3-211ENST00000485363 FAM83AQ86UY5 434 aa19.68■□□□□ 0.74
SIK3-211ENST00000485363 SALL1Q9NSC2 1324 aa19.68■□□□□ 0.74
SIK3-211ENST00000485363 A0A1B0GUL7 405 aa19.67■□□□□ 0.74
SIK3-211ENST00000485363 PRDX5P30044 214 aa19.67■□□□□ 0.74
SIK3-211ENST00000485363 TIMM10P62072 90 aa19.67■□□□□ 0.74
SIK3-211ENST00000485363 TFCP2Q12800 502 aa19.67■□□□□ 0.74
SIK3-211ENST00000485363 CTU1Q7Z7A3 348 aaKnown RBP19.67■□□□□ 0.74
SIK3-211ENST00000485363 ZGPATQ8N5A5 531 aaKnown RBP19.67■□□□□ 0.74
SIK3-211ENST00000485363 HOOK2Q96ED9 719 aa19.67■□□□□ 0.74
SIK3-211ENST00000485363 CFHR5Q9BXR6 569 aa19.67■□□□□ 0.74
SIK3-211ENST00000485363 ZBED9Q6R2W3 1325 aa19.67■□□□□ 0.74
SIK3-211ENST00000485363 NOM1Q5C9Z4 860 aaKnown RBP19.66■□□□□ 0.74
SIK3-211ENST00000485363 IFNL1Q8IU54 200 aa19.66■□□□□ 0.74
SIK3-211ENST00000485363 FTSJ3Q8IY81 847 aaKnown RBP19.66■□□□□ 0.74
SIK3-211ENST00000485363 ZNF296Q8WUU4 475 aaPredicted RBP19.66■□□□□ 0.74
SIK3-211ENST00000485363 ELP3Q9H9T3 547 aa19.66■□□□□ 0.74
SIK3-211ENST00000485363 DAGLAQ9Y4D2 1042 aa19.66■□□□□ 0.74
SIK3-211ENST00000485363 PNMA6EA0A0J9YXQ4 647 aa19.65■□□□□ 0.74
SIK3-211ENST00000485363 GPR25O00155 361 aa19.65■□□□□ 0.74
SIK3-211ENST00000485363 MAP3K9P80192 1104 aa19.65■□□□□ 0.74
SIK3-211ENST00000485363 MVPQ14764 893 aaKnown RBP19.65■□□□□ 0.74
SIK3-211ENST00000485363 DIXDC1Q155Q3 683 aa19.65■□□□□ 0.74
SIK3-211ENST00000485363 XAGE2Q96GT9 111 aa19.65■□□□□ 0.74
SIK3-211ENST00000485363 CSADQ9Y600 493 aa19.65■□□□□ 0.74
SIK3-211ENST00000485363 RPAP1Q9BWH6 1393 aaPredicted RBP19.65■□□□□ 0.74
SIK3-211ENST00000485363 GJA5P36382 358 aa19.64■□□□□ 0.73
SIK3-211ENST00000485363 G3BP1Q13283 466 aaKnown RBP eCLIP19.64■□□□□ 0.73
SIK3-211ENST00000485363 RASGRF1Q13972 1273 aa19.64■□□□□ 0.73
SIK3-211ENST00000485363 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms