RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 ELP3Q9H9T3 547 aa11.81□□□□□ -0.52
GTF3C2-210ENST00000480989 TTF2Q9UNY4 1162 aaKnown RBP11.81□□□□□ -0.52
GTF3C2-210ENST00000480989 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
GTF3C2-210ENST00000480989 UTYO14607 1347 aa11.81□□□□□ -0.52
GTF3C2-210ENST00000480989 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 CRKP46108 304 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 CACNB3P54284 484 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 CCDC57Q2TAC2 916 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 RABL6Q3YEC7 729 aaPredicted RBP11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 FBXO33Q7Z6M2 555 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 DZIP1LQ8IYY4 767 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 ANKRD13AQ8IZ07 590 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 OPTNQ96CV9 577 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 CNNM1Q9NRU3 951 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 SERPINA10Q9UK55 444 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 PTPN22Q9Y2R2 807 aa11.8□□□□□ -0.52
GTF3C2-210ENST00000480989 UNCXA6NJT0 531 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 TCP10L2B9ZVM9 353 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 MYO1BO43795 1136 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 HIBADHP31937 336 aaKnown RBP11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 IREB2P48200 963 aaKnown RBP11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 RBM5P52756 815 aaKnown RBP eCLIP11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 INHBEP58166 350 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 VGLL4Q14135 290 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 SUPT20HL1Q3ZLR7 823 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 SLC4A10Q6U841 1118 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 KLHDC4Q8TBB5 520 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 PCDH10Q9P2E7 1040 aa11.79□□□□□ -0.52
GTF3C2-210ENST00000480989 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
GTF3C2-210ENST00000480989 ARMC5Q96C12 935 aa11.78□□□□□ -0.52
GTF3C2-210ENST00000480989 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
GTF3C2-210ENST00000480989 C9orf78Q9NZ63 289 aaPredicted RBP11.78□□□□□ -0.52
GTF3C2-210ENST00000480989 SNCAIPQ9Y6H5 919 aa11.78□□□□□ -0.52
GTF3C2-210ENST00000480989 EN2P19622 333 aaPredicted RBP11.77□□□□□ -0.53
GTF3C2-210ENST00000480989 MRPL50Q8N5N7 158 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-210ENST00000480989 ARHGAP39Q9C0H5 1083 aa11.77□□□□□ -0.53
GTF3C2-210ENST00000480989 SZT2Q5T011 3432 aa11.77□□□□□ -0.53
GTF3C2-210ENST00000480989 FGFR2P21802 821 aa11.76□□□□□ -0.53
GTF3C2-210ENST00000480989 CTGFP29279 349 aa11.76□□□□□ -0.53
GTF3C2-210ENST00000480989 RFX5P48382 616 aaPredicted RBP11.76□□□□□ -0.53
GTF3C2-210ENST00000480989 BCAMP50895 628 aa11.76□□□□□ -0.53
GTF3C2-210ENST00000480989 SP3Q02447 781 aa11.76□□□□□ -0.53
GTF3C2-210ENST00000480989 CHAF1AQ13111 956 aaPredicted RBP11.76□□□□□ -0.53
GTF3C2-210ENST00000480989 APOBEC3HQ6NTF7 200 aaKnown RBP11.76□□□□□ -0.53
GTF3C2-210ENST00000480989 ERO1AQ96HE7 468 aa11.76□□□□□ -0.53
GTF3C2-210ENST00000480989 PTCH2Q9Y6C5 1203 aa11.76□□□□□ -0.53
GTF3C2-210ENST00000480989 CCL15-CCL14A0A0B4J2E2 113 aa11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 TNFAIP1Q13829 316 aa11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 CCL15Q16663 113 aa11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 ZKSCAN4Q969J2 545 aaPredicted RBP11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 OTUD5Q96G74 571 aa11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 ZNF333Q96JL9 665 aa11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 MROH5Q6ZUA9 1318 aa11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 RANBP2P49792 3224 aaKnown RBP11.75□□□□□ -0.53
GTF3C2-210ENST00000480989 CEP290O15078 2479 aa11.74□□□□□ -0.53
GTF3C2-210ENST00000480989 PDE8BO95263 885 aa11.74□□□□□ -0.53
GTF3C2-210ENST00000480989 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
GTF3C2-210ENST00000480989 TAF1CQ15572 869 aaPredicted RBP11.74□□□□□ -0.53
GTF3C2-210ENST00000480989 ZDHHC15Q96MV8 337 aa11.74□□□□□ -0.53
GTF3C2-210ENST00000480989 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
GTF3C2-210ENST00000480989 BTBD19C9JJ37 291 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 IRF6O14896 467 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 PTPRFP10586 1907 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 INPP5BP32019 993 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 HDLBPQ00341 1268 aaKnown RBP11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 MOGSQ13724 837 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 HABP4Q5JVS0 413 aaKnown RBP11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 METTL24Q5JXM2 366 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 INTS3Q68E01 1043 aaKnown RBP11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 FAM9BQ8IZU0 186 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 SSH1Q8WYL5 1049 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 ADGRA2Q96PE1 1338 aa11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 RPAP1Q9BWH6 1393 aaPredicted RBP11.73□□□□□ -0.53
GTF3C2-210ENST00000480989 PHIPQ8WWQ0 1821 aa11.72□□□□□ -0.53
GTF3C2-210ENST00000480989 DOCK2Q92608 1830 aa11.72□□□□□ -0.53
GTF3C2-210ENST00000480989 ATRNL1Q5VV63 1379 aa11.72□□□□□ -0.53
GTF3C2-210ENST00000480989 GTF2A2P52657 109 aa11.72□□□□□ -0.53
GTF3C2-210ENST00000480989 NFIAQ12857 509 aa11.72□□□□□ -0.53
GTF3C2-210ENST00000480989 OTUD7BQ6GQQ9 843 aa11.72□□□□□ -0.53
GTF3C2-210ENST00000480989 TEKT1Q969V4 418 aa11.72□□□□□ -0.53
GTF3C2-210ENST00000480989 WRNIP1Q96S55 665 aa11.72□□□□□ -0.53
GTF3C2-210ENST00000480989 MGAMO43451 1857 aa11.72□□□□□ -0.53
GTF3C2-210ENST00000480989 KIF16BQ96L93 1317 aa11.71□□□□□ -0.53
GTF3C2-210ENST00000480989 MYH2Q9UKX2 1941 aa11.71□□□□□ -0.53
GTF3C2-210ENST00000480989 ANP32CO43423 234 aa11.71□□□□□ -0.53
GTF3C2-210ENST00000480989 TLR2O60603 784 aa11.71□□□□□ -0.53
GTF3C2-210ENST00000480989 SLURP2P0DP57 97 aa11.71□□□□□ -0.53
GTF3C2-210ENST00000480989 MIGA2Q7L4E1 593 aa11.71□□□□□ -0.53
GTF3C2-210ENST00000480989 FAM83AQ86UY5 434 aa11.71□□□□□ -0.53
GTF3C2-210ENST00000480989 SH3TC2Q8TF17 1288 aa11.71□□□□□ -0.53
GTF3C2-210ENST00000480989 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
GTF3C2-210ENST00000480989 RFX7Q2KHR2 1363 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms