RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 MEIS3Q99687 375 aa22.41■■□□□ 1.18
ABCB1-204ENST00000476862 TDRD3Q9H7E2 651 aaKnown RBP22.41■■□□□ 1.18
ABCB1-204ENST00000476862 TMOD2Q9NZR1 351 aa22.41■■□□□ 1.18
ABCB1-204ENST00000476862 FGFR2P21802 821 aa22.4■■□□□ 1.18
ABCB1-204ENST00000476862 IREB2P48200 963 aaKnown RBP22.4■■□□□ 1.18
ABCB1-204ENST00000476862 HDLBPQ00341 1268 aaKnown RBP22.4■■□□□ 1.18
ABCB1-204ENST00000476862 SREBF2Q12772 1141 aa22.4■■□□□ 1.18
ABCB1-204ENST00000476862 RASA3Q14644 834 aa22.4■■□□□ 1.18
ABCB1-204ENST00000476862 ATF7IPQ6VMQ6 1270 aa22.4■■□□□ 1.18
ABCB1-204ENST00000476862 WDR66Q8TBY9 1149 aa22.4■■□□□ 1.18
ABCB1-204ENST00000476862 ZNF70Q9UC06 446 aaPredicted RBP22.4■■□□□ 1.18
ABCB1-204ENST00000476862 SUGT1Q9Y2Z0 365 aa22.4■■□□□ 1.18
ABCB1-204ENST00000476862 MYH13Q9UKX3 1938 aa22.39■■□□□ 1.18
ABCB1-204ENST00000476862 MKRN3Q13064 507 aaKnown RBP22.39■■□□□ 1.17
ABCB1-204ENST00000476862 ARAP2Q8WZ64 1704 aa22.38■■□□□ 1.17
ABCB1-204ENST00000476862 BCAR3O75815 825 aa22.38■■□□□ 1.17
ABCB1-204ENST00000476862 SPDYE2Q495Y8 402 aa22.38■■□□□ 1.17
ABCB1-204ENST00000476862 ATG9AQ7Z3C6 839 aa22.38■■□□□ 1.17
ABCB1-204ENST00000476862 ABHD8Q96I13 439 aa22.38■■□□□ 1.17
ABCB1-204ENST00000476862 TCP10L2B9ZVM9 353 aa22.37■■□□□ 1.17
ABCB1-204ENST00000476862 SRGAP3O43295 1099 aa22.37■■□□□ 1.17
ABCB1-204ENST00000476862 NBPF12Q5TAG4 269 aaPredicted RBP22.37■■□□□ 1.17
ABCB1-204ENST00000476862 ZKSCAN2Q63HK3 967 aa22.37■■□□□ 1.17
ABCB1-204ENST00000476862 CLUAP1Q96AJ1 413 aa22.37■■□□□ 1.17
ABCB1-204ENST00000476862 UNCXA6NJT0 531 aa22.36■■□□□ 1.17
ABCB1-204ENST00000476862 GNAI2P04899 355 aa22.36■■□□□ 1.17
ABCB1-204ENST00000476862 TRIM27P14373 513 aa22.36■■□□□ 1.17
ABCB1-204ENST00000476862 DGKZQ13574 1117 aa22.36■■□□□ 1.17
ABCB1-204ENST00000476862 LDLRAD1Q5T700 205 aa22.36■■□□□ 1.17
ABCB1-204ENST00000476862 MRIQ9BWK5 157 aa22.36■■□□□ 1.17
ABCB1-204ENST00000476862 COPRSQ9NQ92 184 aa22.36■■□□□ 1.17
ABCB1-204ENST00000476862 PA2G4Q9UQ80 394 aaKnown RBP22.36■■□□□ 1.17
ABCB1-204ENST00000476862 MAP3K11Q16584 847 aa22.35■■□□□ 1.17
ABCB1-204ENST00000476862 AKAP2Q9Y2D5 859 aa22.35■■□□□ 1.17
ABCB1-204ENST00000476862 CCDC85CA6NKD9 419 aa22.34■■□□□ 1.17
ABCB1-204ENST00000476862 INHBEP58166 350 aa22.34■■□□□ 1.17
ABCB1-204ENST00000476862 FTSJ3Q8IY81 847 aaKnown RBP22.34■■□□□ 1.17
ABCB1-204ENST00000476862 ANKRD13AQ8IZ07 590 aa22.34■■□□□ 1.17
ABCB1-204ENST00000476862 DENND2AQ9ULE3 1009 aa22.34■■□□□ 1.17
ABCB1-204ENST00000476862 FZD1Q9UP38 647 aa22.34■■□□□ 1.17
ABCB1-204ENST00000476862 MANSC4A6NHS7 340 aaPredicted RBP22.33■■□□□ 1.17
ABCB1-204ENST00000476862 SEMA3EO15041 775 aa22.33■■□□□ 1.17
ABCB1-204ENST00000476862 TM4SF4P48230 202 aa22.33■■□□□ 1.17
ABCB1-204ENST00000476862 GRIK5Q16478 980 aa22.33■■□□□ 1.17
ABCB1-204ENST00000476862 SPRYD7Q5W111 196 aa22.33■■□□□ 1.17
ABCB1-204ENST00000476862 HOOK2Q96ED9 719 aa22.33■■□□□ 1.17
ABCB1-204ENST00000476862 ZDHHC15Q96MV8 337 aa22.33■■□□□ 1.17
ABCB1-204ENST00000476862 MCOLN1Q9GZU1 580 aa22.33■■□□□ 1.17
ABCB1-204ENST00000476862 LDHBP07195 334 aaKnown RBP22.32■■□□□ 1.16
ABCB1-204ENST00000476862 HHIPL2Q6UWX4 724 aa22.32■■□□□ 1.16
ABCB1-204ENST00000476862 ZGPATQ8N5A5 531 aaKnown RBP22.32■■□□□ 1.16
ABCB1-204ENST00000476862 AOX1Q06278 1338 aa22.31■■□□□ 1.16
ABCB1-204ENST00000476862 USP2O75604 605 aaPredicted RBP22.31■■□□□ 1.16
ABCB1-204ENST00000476862 ALDH1A1P00352 501 aa22.31■■□□□ 1.16
ABCB1-204ENST00000476862 ZBTB48P10074 688 aaPredicted RBP22.31■■□□□ 1.16
ABCB1-204ENST00000476862 G3BP1Q13283 466 aaKnown RBP eCLIP22.31■■□□□ 1.16
ABCB1-204ENST00000476862 GORABQ5T7V8 394 aa22.31■■□□□ 1.16
ABCB1-204ENST00000476862 TBC1D8O95759 1140 aa22.3■■□□□ 1.16
ABCB1-204ENST00000476862 OTUD7BQ6GQQ9 843 aa22.3■■□□□ 1.16
ABCB1-204ENST00000476862 NEUROD6Q96NK8 337 aa22.3■■□□□ 1.16
ABCB1-204ENST00000476862 TMEM39BQ9GZU3 492 aa22.3■■□□□ 1.16
ABCB1-204ENST00000476862 AK9Q5TCS8 1911 aa22.29■■□□□ 1.16
ABCB1-204ENST00000476862 MTX1Q13505 466 aa22.29■■□□□ 1.16
ABCB1-204ENST00000476862 MVPQ14764 893 aaKnown RBP22.29■■□□□ 1.16
ABCB1-204ENST00000476862 TMEM57Q8N5G2 664 aa22.29■■□□□ 1.16
ABCB1-204ENST00000476862 WNK4Q96J92 1243 aa22.29■■□□□ 1.16
ABCB1-204ENST00000476862 CLMNQ96JQ2 1002 aa22.29■■□□□ 1.16
ABCB1-204ENST00000476862 CSADQ9Y600 493 aa22.29■■□□□ 1.16
ABCB1-204ENST00000476862 PHKA1P46020 1223 aa22.28■■□□□ 1.16
ABCB1-204ENST00000476862 CACNB3P54284 484 aa22.28■■□□□ 1.16
ABCB1-204ENST00000476862 TIMM10P62072 90 aa22.28■■□□□ 1.16
ABCB1-204ENST00000476862 TFCP2Q12800 502 aa22.28■■□□□ 1.16
ABCB1-204ENST00000476862 FKBP1CQ5VVH2 108 aa22.28■■□□□ 1.16
ABCB1-204ENST00000476862 CCDC102BQ68D86 513 aa22.28■■□□□ 1.16
ABCB1-204ENST00000476862 FAM83AQ86UY5 434 aa22.28■■□□□ 1.16
ABCB1-204ENST00000476862 TNNQ9UQP3 1299 aa22.28■■□□□ 1.16
ABCB1-204ENST00000476862 A0A1B0GUL7 405 aa22.27■■□□□ 1.16
ABCB1-204ENST00000476862 OS9Q13438 667 aaPredicted RBP22.27■■□□□ 1.16
ABCB1-204ENST00000476862 SPTY2D1Q68D10 685 aaPredicted RBP22.27■■□□□ 1.16
ABCB1-204ENST00000476862 SLF2Q8IX21 1173 aa22.27■■□□□ 1.16
ABCB1-204ENST00000476862 ZBED9Q6R2W3 1325 aa22.27■■□□□ 1.16
ABCB1-204ENST00000476862 SSC5DA1L4H1 1573 aa22.26■■□□□ 1.15
ABCB1-204ENST00000476862 MAP3K9P80192 1104 aa22.26■■□□□ 1.15
ABCB1-204ENST00000476862 DCAF15Q66K64 600 aa22.26■■□□□ 1.15
ABCB1-204ENST00000476862 APOBEC3HQ6NTF7 200 aaKnown RBP22.26■■□□□ 1.15
ABCB1-204ENST00000476862 CTU1Q7Z7A3 348 aaKnown RBP22.26■■□□□ 1.15
ABCB1-204ENST00000476862 ITPRIPQ8IWB1 547 aa22.26■■□□□ 1.15
ABCB1-204ENST00000476862 ELP3Q9H9T3 547 aa22.26■■□□□ 1.15
ABCB1-204ENST00000476862 ABCF2Q9UG63 623 aa22.26■■□□□ 1.15
ABCB1-204ENST00000476862 PRDX5P30044 214 aa22.25■■□□□ 1.15
ABCB1-204ENST00000476862 ADORA1P30542 326 aa22.25■■□□□ 1.15
ABCB1-204ENST00000476862 DZIP1Q86YF9 867 aaKnown RBP22.25■■□□□ 1.15
ABCB1-204ENST00000476862 XAGE2Q96GT9 111 aa22.25■■□□□ 1.15
ABCB1-204ENST00000476862 TEPSINQ96N21 525 aa22.25■■□□□ 1.15
ABCB1-204ENST00000476862 SALL1Q9NSC2 1324 aa22.25■■□□□ 1.15
ABCB1-204ENST00000476862 IFNL1Q8IU54 200 aa22.24■■□□□ 1.15
ABCB1-204ENST00000476862 OPTNQ96CV9 577 aa22.24■■□□□ 1.15
ABCB1-204ENST00000476862 GPR25O00155 361 aa22.23■■□□□ 1.15
ABCB1-204ENST00000476862 DIXDC1Q155Q3 683 aa22.23■■□□□ 1.15
ABCB1-204ENST00000476862 ZNF296Q8WUU4 475 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms