RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TEKT1Q969V4 418 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 CFHR5Q9BXR6 569 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 OTOFQ9HC10 1997 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 SALL1Q9NSC2 1324 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 F8W031 263 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-228ENST00000459788 UBE2Q2LH0YL09 131 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 ZBTB48P10074 688 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-228ENST00000459788 CRKP46108 304 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 BCAMP50895 628 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 RBM5P52756 815 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDLBP-228ENST00000459788 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDLBP-228ENST00000459788 SREBF2Q12772 1141 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 ATP2B3Q16720 1220 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 ZKSCAN2Q63HK3 967 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 ZDHHC15Q96MV8 337 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 ZIC5Q96T25 663 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 MEIS3Q99687 375 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 RNF186Q9NXI6 227 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 ZNF70Q9UC06 446 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-228ENST00000459788 AKAP2Q9Y2D5 859 aa12.44□□□□□ -0.42
HDLBP-228ENST00000459788 AK9Q5TCS8 1911 aa12.43□□□□□ -0.42
HDLBP-228ENST00000459788 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
HDLBP-228ENST00000459788 GNAI2P04899 355 aa12.43□□□□□ -0.42
HDLBP-228ENST00000459788 IREB2P48200 963 aaKnown RBP12.43□□□□□ -0.42
HDLBP-228ENST00000459788 RASA3Q14644 834 aa12.43□□□□□ -0.42
HDLBP-228ENST00000459788 FAM83AQ86UY5 434 aa12.43□□□□□ -0.42
HDLBP-228ENST00000459788 ZGPATQ8N5A5 531 aaKnown RBP12.43□□□□□ -0.42
HDLBP-228ENST00000459788 DENND2AQ9ULE3 1009 aa12.43□□□□□ -0.42
HDLBP-228ENST00000459788 SSC5DA1L4H1 1573 aa12.43□□□□□ -0.42
HDLBP-228ENST00000459788 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-228ENST00000459788 MANSC4A6NHS7 340 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-228ENST00000459788 PRAMEF18Q5VWM3 479 aa12.42□□□□□ -0.42
HDLBP-228ENST00000459788 ANKRD13AQ8IZ07 590 aa12.42□□□□□ -0.42
HDLBP-228ENST00000459788 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
HDLBP-228ENST00000459788 TMOD2Q9NZR1 351 aa12.42□□□□□ -0.42
HDLBP-228ENST00000459788 ANGEL1Q9UNK9 670 aaKnown RBP12.42□□□□□ -0.42
HDLBP-228ENST00000459788 JAG2Q9Y219 1238 aa12.42□□□□□ -0.42
HDLBP-228ENST00000459788 CLRN2A0PK11 232 aa12.41□□□□□ -0.42
HDLBP-228ENST00000459788 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
HDLBP-228ENST00000459788 IGSF3O75054 1194 aa12.41□□□□□ -0.42
HDLBP-228ENST00000459788 BCAR3O75815 825 aa12.41□□□□□ -0.42
HDLBP-228ENST00000459788 CHAF1AQ13111 956 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-228ENST00000459788 SPRYD7Q5W111 196 aa12.41□□□□□ -0.42
HDLBP-228ENST00000459788 MOB2Q70IA6 237 aa12.41□□□□□ -0.42
HDLBP-228ENST00000459788 SLC10A4Q96EP9 437 aa12.41□□□□□ -0.42
HDLBP-228ENST00000459788 TDRD3Q9H7E2 651 aaKnown RBP12.41□□□□□ -0.42
HDLBP-228ENST00000459788 USP2O75604 605 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-228ENST00000459788 TRPA1O75762 1119 aa12.4□□□□□ -0.42
HDLBP-228ENST00000459788 MS4A1P11836 297 aa12.4□□□□□ -0.42
HDLBP-228ENST00000459788 MVPQ14764 893 aaKnown RBP12.4□□□□□ -0.42
HDLBP-228ENST00000459788 NBPF12Q5TAG4 269 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-228ENST00000459788 SLF2Q8IX21 1173 aa12.4□□□□□ -0.42
HDLBP-228ENST00000459788 FRAT1Q92837 279 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-228ENST00000459788 ABHD8Q96I13 439 aa12.4□□□□□ -0.42
HDLBP-228ENST00000459788 TEPSINQ96N21 525 aa12.4□□□□□ -0.42
HDLBP-228ENST00000459788 SIL1Q9H173 461 aa12.4□□□□□ -0.42
HDLBP-228ENST00000459788 SCAF8Q9UPN6 1271 aaKnown RBP12.4□□□□□ -0.42
HDLBP-228ENST00000459788 IQSEC3Q9UPP2 1182 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-228ENST00000459788 PCDHAC2Q9Y5I4 1007 aa12.4□□□□□ -0.42
HDLBP-228ENST00000459788 SPTY2D1Q68D10 685 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-228ENST00000459788 APOBEC3HQ6NTF7 200 aaKnown RBP12.39□□□□□ -0.43
HDLBP-228ENST00000459788 GPR108Q9NPR9 543 aa12.39□□□□□ -0.43
HDLBP-228ENST00000459788 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-228ENST00000459788 LDHBP07195 334 aaKnown RBP12.38□□□□□ -0.43
HDLBP-228ENST00000459788 GRIK5Q16478 980 aa12.38□□□□□ -0.43
HDLBP-228ENST00000459788 PKN2Q16513 984 aaKnown RBP12.38□□□□□ -0.43
HDLBP-228ENST00000459788 CCDC102BQ68D86 513 aa12.38□□□□□ -0.43
HDLBP-228ENST00000459788 OTUD7BQ6GQQ9 843 aa12.38□□□□□ -0.43
HDLBP-228ENST00000459788 FAM163AQ96GL9 167 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-228ENST00000459788 WNK4Q96J92 1243 aa12.38□□□□□ -0.43
HDLBP-228ENST00000459788 TSKSQ9UJT2 592 aa12.38□□□□□ -0.43
HDLBP-228ENST00000459788 PA2G4Q9UQ80 394 aaKnown RBP12.38□□□□□ -0.43
HDLBP-228ENST00000459788 DOCK2Q92608 1830 aa12.38□□□□□ -0.43
HDLBP-228ENST00000459788 AOX1Q06278 1338 aa12.37□□□□□ -0.43
HDLBP-228ENST00000459788 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
HDLBP-228ENST00000459788 TESPA1A2RU30 521 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-228ENST00000459788 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
HDLBP-228ENST00000459788 G3BP1Q13283 466 aaKnown RBP eCLIP12.37□□□□□ -0.432e-17■□□□□ 8.2
HDLBP-228ENST00000459788 POLA2Q14181 598 aa12.37□□□□□ -0.43
HDLBP-228ENST00000459788 DCAF15Q66K64 600 aa12.37□□□□□ -0.43
HDLBP-228ENST00000459788 FTSJ3Q8IY81 847 aaKnown RBP12.37□□□□□ -0.43
HDLBP-228ENST00000459788 TMEM57Q8N5G2 664 aa12.37□□□□□ -0.43
HDLBP-228ENST00000459788 SSH3Q8TE77 659 aa12.37□□□□□ -0.43
HDLBP-228ENST00000459788 FAM151AQ8WW52 585 aa12.37□□□□□ -0.43
HDLBP-228ENST00000459788 GAKO14976 1311 aa12.37□□□□□ -0.43
HDLBP-228ENST00000459788 TCP10L2B9ZVM9 353 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 PHKA1P46020 1223 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 ATP8B2P98198 1209 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 TFCP2Q12800 502 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 DGKZQ13574 1117 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 PRKG1Q13976 671 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 CTU1Q7Z7A3 348 aaKnown RBP12.36□□□□□ -0.43
HDLBP-228ENST00000459788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDLBP-228ENST00000459788 CLUAP1Q96AJ1 413 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 XAGE2Q96GT9 111 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 MCOLN1Q9GZU1 580 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 ZCCHC17Q9NP64 241 aaKnown RBP12.36□□□□□ -0.43
HDLBP-228ENST00000459788 DAGLAQ9Y4D2 1042 aa12.36□□□□□ -0.43
HDLBP-228ENST00000459788 CSADQ9Y600 493 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms