RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PDE8BO95263 885 aa27.05■■□□□ 1.92
CPNE1-220ENST00000458038 CRKP46108 304 aa27.05■■□□□ 1.92
CPNE1-220ENST00000458038 MRIQ9BWK5 157 aa27.05■■□□□ 1.92
CPNE1-220ENST00000458038 TESPA1A2RU30 521 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-220ENST00000458038 E9PSI1 815 aa27.04■■□□□ 1.92
CPNE1-220ENST00000458038 IGF2BP3O00425 579 aaKnown RBP eCLIP27.04■■□□□ 1.92
CPNE1-220ENST00000458038 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-220ENST00000458038 ANKRD44Q8N8A2 993 aa27.03■■□□□ 1.92
CPNE1-220ENST00000458038 SUGT1Q9Y2Z0 365 aa27.03■■□□□ 1.92
CPNE1-220ENST00000458038 KIF16BQ96L93 1317 aa27.02■■□□□ 1.92
CPNE1-220ENST00000458038 LRRC24Q50LG9 513 aa27.02■■□□□ 1.92
CPNE1-220ENST00000458038 VGLL2Q8N8G2 317 aa27.02■■□□□ 1.92
CPNE1-220ENST00000458038 TEKT1Q969V4 418 aa27.02■■□□□ 1.92
CPNE1-220ENST00000458038 ERO1AQ96HE7 468 aa27.02■■□□□ 1.92
CPNE1-220ENST00000458038 TEPSINQ96N21 525 aa27.02■■□□□ 1.92
CPNE1-220ENST00000458038 USP44Q9H0E7 712 aa27.01■■□□□ 1.91
CPNE1-220ENST00000458038 MAST3O60307 1309 aa27■■□□□ 1.91
CPNE1-220ENST00000458038 TCP10L2B9ZVM9 353 aa27■■□□□ 1.91
CPNE1-220ENST00000458038 GJA5P36382 358 aa27■■□□□ 1.91
CPNE1-220ENST00000458038 INTS3Q68E01 1043 aaKnown RBP27■■□□□ 1.91
CPNE1-220ENST00000458038 HOOK2Q96ED9 719 aa27■■□□□ 1.91
CPNE1-220ENST00000458038 TRIM17Q9Y577 477 aa27■■□□□ 1.91
CPNE1-220ENST00000458038 OTOFQ9HC10 1997 aa26.99■■□□□ 1.91
CPNE1-220ENST00000458038 IFIT1P09914 478 aaKnown RBP26.99■■□□□ 1.91
CPNE1-220ENST00000458038 MAP3K9P80192 1104 aa26.99■■□□□ 1.91
CPNE1-220ENST00000458038 CHAF1AQ13111 956 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-220ENST00000458038 PUM3Q15397 648 aaKnown RBP26.99■■□□□ 1.91
CPNE1-220ENST00000458038 FKBP1CQ5VVH2 108 aa26.99■■□□□ 1.91
CPNE1-220ENST00000458038 OTOP1Q7RTM1 612 aa26.99■■□□□ 1.91
CPNE1-220ENST00000458038 SSH1Q8WYL5 1049 aa26.99■■□□□ 1.91
CPNE1-220ENST00000458038 OPTNQ96CV9 577 aa26.99■■□□□ 1.91
CPNE1-220ENST00000458038 ELP3Q9H9T3 547 aa26.99■■□□□ 1.91
CPNE1-220ENST00000458038 IQSEC3Q9UPP2 1182 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-220ENST00000458038 CSADQ9Y600 493 aa26.99■■□□□ 1.91
CPNE1-220ENST00000458038 HTTP42858 3142 aa26.99■■□□□ 1.91
CPNE1-220ENST00000458038 CRHR2Q13324 411 aa26.98■■□□□ 1.91
CPNE1-220ENST00000458038 PRPF38BQ5VTL8 546 aaKnown RBP26.98■■□□□ 1.91
CPNE1-220ENST00000458038 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-220ENST00000458038 ZDHHC15Q96MV8 337 aa26.98■■□□□ 1.91
CPNE1-220ENST00000458038 TMEM39BQ9GZU3 492 aa26.98■■□□□ 1.91
CPNE1-220ENST00000458038 TMOD2Q9NZR1 351 aa26.98■■□□□ 1.91
CPNE1-220ENST00000458038 GTF2A2P52657 109 aa26.97■■□□□ 1.91
CPNE1-220ENST00000458038 ALDH1L2Q3SY69 923 aa26.97■■□□□ 1.91
CPNE1-220ENST00000458038 FAM83AQ86UY5 434 aa26.97■■□□□ 1.91
CPNE1-220ENST00000458038 MS4A4AQ96JQ5 239 aa26.97■■□□□ 1.91
CPNE1-220ENST00000458038 PTPN18Q99952 460 aa26.97■■□□□ 1.91
CPNE1-220ENST00000458038 BCAMP50895 628 aa26.96■■□□□ 1.91
CPNE1-220ENST00000458038 SP3Q02447 781 aa26.96■■□□□ 1.91
CPNE1-220ENST00000458038 ARHGEF6Q15052 776 aa26.96■■□□□ 1.91
CPNE1-220ENST00000458038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.96■■□□□ 1.91
CPNE1-220ENST00000458038 FGFR2P21802 821 aa26.95■■□□□ 1.9
CPNE1-220ENST00000458038 SLFN5Q08AF3 891 aa26.95■■□□□ 1.9
CPNE1-220ENST00000458038 VGLL4Q14135 290 aa26.95■■□□□ 1.9
CPNE1-220ENST00000458038 GRIK5Q16478 980 aa26.95■■□□□ 1.9
CPNE1-220ENST00000458038 HHIPL2Q6UWX4 724 aa26.95■■□□□ 1.9
CPNE1-220ENST00000458038 KIAA0100Q14667 2235 aaKnown RBP26.95■■□□□ 1.9
CPNE1-220ENST00000458038 WDR66Q8TBY9 1149 aa26.94■■□□□ 1.9
CPNE1-220ENST00000458038 EFCC1Q9HA90 598 aa26.94■■□□□ 1.9
CPNE1-220ENST00000458038 FBXO3Q9UK99 471 aa26.94■■□□□ 1.9
CPNE1-220ENST00000458038 PTPN22Q9Y2R2 807 aa26.94■■□□□ 1.9
CPNE1-220ENST00000458038 CENPFP49454 3210 aa26.94■■□□□ 1.9
CPNE1-220ENST00000458038 EYA2O00167 538 aa26.93■■□□□ 1.9
CPNE1-220ENST00000458038 WDHD1O75717 1129 aaPredicted RBP26.93■■□□□ 1.9
CPNE1-220ENST00000458038 SLC5A1P13866 664 aa26.93■■□□□ 1.9
CPNE1-220ENST00000458038 KLHDC4Q8TBB5 520 aa26.93■■□□□ 1.9
CPNE1-220ENST00000458038 LPIN2Q92539 896 aa26.93■■□□□ 1.9
CPNE1-220ENST00000458038 HDAC5Q9UQL6 1122 aa26.93■■□□□ 1.9
CPNE1-220ENST00000458038 CDAN1Q8IWY9 1227 aa26.92■■□□□ 1.9
CPNE1-220ENST00000458038 CD99L2Q8TCZ2 262 aa26.92■■□□□ 1.9
CPNE1-220ENST00000458038 ZFYVE28Q9HCC9 887 aa26.92■■□□□ 1.9
CPNE1-220ENST00000458038 MYH13Q9UKX3 1938 aa26.92■■□□□ 1.9
CPNE1-220ENST00000458038 CCL15-CCL14A0A0B4J2E2 113 aa26.91■■□□□ 1.9
CPNE1-220ENST00000458038 CCL15Q16663 113 aa26.91■■□□□ 1.9
CPNE1-220ENST00000458038 APOBEC3HQ6NTF7 200 aaKnown RBP26.91■■□□□ 1.9
CPNE1-220ENST00000458038 ERO1BQ86YB8 467 aa26.91■■□□□ 1.9
CPNE1-220ENST00000458038 BRI3BPQ8WY22 251 aa26.91■■□□□ 1.9
CPNE1-220ENST00000458038 SPDYE5A6NIY4 337 aa26.9■■□□□ 1.9
CPNE1-220ENST00000458038 CT47B1P0C2W7 299 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-220ENST00000458038 RFX5P48382 616 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-220ENST00000458038 TAF1CQ15572 869 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-220ENST00000458038 DCAF15Q66K64 600 aa26.9■■□□□ 1.9
CPNE1-220ENST00000458038 ZCCHC17Q9NP64 241 aaKnown RBP26.9■■□□□ 1.9
CPNE1-220ENST00000458038 RPAP1Q9BWH6 1393 aaPredicted RBP26.89■■□□□ 1.9
CPNE1-220ENST00000458038 CETPP11597 493 aa26.89■■□□□ 1.9
CPNE1-220ENST00000458038 OTUD5Q96G74 571 aa26.89■■□□□ 1.9
CPNE1-220ENST00000458038 SMC4Q9NTJ3 1288 aa26.89■■□□□ 1.9
CPNE1-220ENST00000458038 CACNB3P54284 484 aa26.88■■□□□ 1.89
CPNE1-220ENST00000458038 CNKSR2Q8WXI2 1034 aa26.88■■□□□ 1.89
CPNE1-220ENST00000458038 ARMC5Q96C12 935 aa26.88■■□□□ 1.89
CPNE1-220ENST00000458038 GNL3LQ9NVN8 582 aaKnown RBP26.88■■□□□ 1.89
CPNE1-220ENST00000458038 PCDH10Q9P2E7 1040 aa26.88■■□□□ 1.89
CPNE1-220ENST00000458038 CIAO1O76071 339 aa26.87■■□□□ 1.89
CPNE1-220ENST00000458038 UBTFL1P0CB47 393 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-220ENST00000458038 WRNIP1Q96S55 665 aa26.87■■□□□ 1.89
CPNE1-220ENST00000458038 ATG9AQ7Z3C6 839 aa26.86■■□□□ 1.89
CPNE1-220ENST00000458038 CEP126Q9P2H0 1117 aa26.86■■□□□ 1.89
CPNE1-220ENST00000458038 SNCAIPQ9Y6H5 919 aa26.86■■□□□ 1.89
CPNE1-220ENST00000458038 MKI67P46013 3256 aaKnown RBP26.85■■□□□ 1.89
CPNE1-220ENST00000458038 RBBP6Q7Z6E9 1792 aaKnown RBP26.85■■□□□ 1.89
CPNE1-220ENST00000458038 SNAPC2Q13487 334 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms