RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 SEC31BQ9NQW1 1179 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 CNTN3Q9P232 1028 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 KANSL3Q9P2N6 904 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 FAN1Q9Y2M0 1017 aa5.31□□□□□ -1.56
HMGB3P30-201ENST00000457863 FAM177BA6PVY3 158 aa5.3□□□□□ -1.56
HMGB3P30-201ENST00000457863 NPR3P17342 541 aa5.3□□□□□ -1.56
HMGB3P30-201ENST00000457863 EIF1AXP47813 144 aaKnown RBP5.3□□□□□ -1.56
HMGB3P30-201ENST00000457863 PMEPA1Q969W9 287 aa5.3□□□□□ -1.56
HMGB3P30-201ENST00000457863 EVI5LQ96CN4 794 aa5.3□□□□□ -1.56
HMGB3P30-201ENST00000457863 CHRDQ9H2X0 955 aa5.3□□□□□ -1.56
HMGB3P30-201ENST00000457863 DZANK1Q9NVP4 752 aa5.3□□□□□ -1.56
HMGB3P30-201ENST00000457863 SOX13Q9UN79 622 aa5.3□□□□□ -1.56
HMGB3P30-201ENST00000457863 TBX22Q9Y458 520 aa5.3□□□□□ -1.56
HMGB3P30-201ENST00000457863 CCDC194A0A1B0GVG4 234 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 KIAA1324LA8MWY0 1029 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 IGLV1-40P01703 118 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 CES1P23141 567 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 MPSTP25325 297 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 SSFA2P28290 1259 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 CABP4P57796 275 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 TAGLNQ01995 201 aaKnown RBP5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 DNM1Q05193 864 aaKnown RBP5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 DUOXA2Q1HG44 320 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 CCDC144BQ3MJ40 725 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 ALKBH2Q6NS38 261 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 FBXO33Q7Z6M2 555 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 C1orf127Q8N9H9 656 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 MYRFLQ96LU7 910 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 TANGO6Q9C0B7 1094 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 SH2B1Q9NRF2 756 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 CHPF2Q9P2E5 772 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 STOML1Q9UBI4 398 aa5.29□□□□□ -1.56
HMGB3P30-201ENST00000457863 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 PDE2AO00408 941 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 PPFIA4O75335 1185 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 ACPPP15309 386 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 IBSPP21815 317 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 ANKRD34AQ69YU3 496 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 ZDHHC13Q8IUH4 622 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 TMEM102Q8N9M5 508 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 SNX29Q8TEQ0 813 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 UBASH3BQ8TF42 649 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 GTF3C2Q8WUA4 911 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 PMM1Q92871 262 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 UTP4Q969X6 686 aaKnown RBP5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 KLHDC7BQ96G42 594 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 GGNBP2Q9H3C7 697 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 PCMTD2Q9NV79 361 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 HIF3AQ9Y2N7 669 aa5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 NOP58Q9Y2X3 529 aaKnown RBP5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P30-201ENST00000457863 DDX3YO15523 660 aaKnown RBP5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 CREB3O43889 395 aa5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 MCCP23508 829 aa5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 CDC25BP30305 580 aa5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 USP5P45974 858 aa5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 HDLBPQ00341 1268 aaKnown RBP5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 EHHADHQ08426 723 aa5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 TSNAXIP1Q2TAA8 658 aa5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 HSP90AB2PQ58FF8 381 aa5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 RNF208Q9H0X6 261 aa5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 C7orf69Q9H7B7 122 aa5.27□□□□□ -1.57
HMGB3P30-201ENST00000457863 A6NHS1 94 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 TNFRSF21O75509 655 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 TGFB1P01137 390 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 EDN3P14138 238 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 PREPP48147 710 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 NFIAQ12857 509 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 SF3B2Q13435 895 aaKnown RBP5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 LONRF3Q496Y0 759 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 C8orf34Q49A92 452 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 RNF43Q68DV7 783 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 FAM20CQ8IXL6 584 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 NLGN1Q8N2Q7 840 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 SLC43A3Q8NBI5 491 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 TTC16Q8NEE8 873 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 DHX38Q92620 1227 aaKnown RBP5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 ARMC5Q96C12 935 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 HHIPQ96QV1 700 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 DBNDD2Q9BQY9 259 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 BACH2Q9BYV9 841 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 BHLHE41Q9C0J9 482 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 MAF1Q9H063 256 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 SOX17Q9H6I2 414 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 PRKAG2Q9UGJ0 569 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 POLIQ9UNA4 740 aa5.26□□□□□ -1.57
HMGB3P30-201ENST00000457863 MEGF11A6BM72 1044 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 U2SURPO15042 1029 aaKnown RBP5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 COBLO75128 1261 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 PHACTR2O75167 634 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 FAM13AO94988 1023 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 SSTR4P31391 388 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 RAD51AP2Q09MP3 1159 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 C19orf57Q0VDD7 668 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 MTMR3Q13615 1198 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 AAMPQ13685 434 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 TCEAL1Q15170 157 aa5.25□□□□□ -1.57
HMGB3P30-201ENST00000457863 GJD3Q8N144 294 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms