RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 LRP5O75197 1615 aa23.46■■□□□ 1.35
CSPG5-203ENST00000456150 KINO60870 393 aaKnown RBP23.45■■□□□ 1.35
CSPG5-203ENST00000456150 FAM160A1Q05DH4 1040 aa23.45■■□□□ 1.35
CSPG5-203ENST00000456150 SLC9C2Q5TAH2 1124 aa23.45■■□□□ 1.35
CSPG5-203ENST00000456150 PTF1AQ7RTS3 328 aa23.45■■□□□ 1.35
CSPG5-203ENST00000456150 ILDR1Q86SU0 546 aaPredicted RBP23.45■■□□□ 1.35
CSPG5-203ENST00000456150 C8orf76Q96K31 380 aa23.45■■□□□ 1.35
CSPG5-203ENST00000456150 DNAJC25Q9H1X3 360 aa23.45■■□□□ 1.35
CSPG5-203ENST00000456150 RTEL1Q9NZ71 1219 aa23.45■■□□□ 1.35
CSPG5-203ENST00000456150 CPLX1O14810 134 aa23.45■■□□□ 1.34
CSPG5-203ENST00000456150 ARID4AP29374 1257 aaPredicted RBP23.45■■□□□ 1.34
CSPG5-203ENST00000456150 ME1P48163 572 aa23.45■■□□□ 1.34
CSPG5-203ENST00000456150 ANTXR2P58335 489 aa23.45■■□□□ 1.34
CSPG5-203ENST00000456150 DZIP3Q86Y13 1208 aaKnown RBP23.45■■□□□ 1.34
CSPG5-203ENST00000456150 RGS22Q8NE09 1264 aa23.45■■□□□ 1.34
CSPG5-203ENST00000456150 AK7Q96M32 723 aa23.45■■□□□ 1.34
CSPG5-203ENST00000456150 QTRT2Q9H974 415 aaKnown RBP23.45■■□□□ 1.34
CSPG5-203ENST00000456150 TBC1D2BQ9UPU7 963 aa23.45■■□□□ 1.34
CSPG5-203ENST00000456150 STX1AQ16623 288 aa23.44■■□□□ 1.34
CSPG5-203ENST00000456150 GOLPH3LQ9H4A5 285 aa23.44■■□□□ 1.34
CSPG5-203ENST00000456150 HPS5Q9UPZ3 1129 aa23.44■■□□□ 1.34
CSPG5-203ENST00000456150 MYO5AQ9Y4I1 1855 aaKnown RBP23.44■■□□□ 1.34
CSPG5-203ENST00000456150 DYNC1I1O14576 645 aa23.44■■□□□ 1.34
CSPG5-203ENST00000456150 BRAPQ7Z569 592 aa23.44■■□□□ 1.34
CSPG5-203ENST00000456150 KCNF1Q9H3M0 494 aa23.44■■□□□ 1.34
CSPG5-203ENST00000456150 ORC3Q9UBD5 711 aaPredicted RBP23.44■■□□□ 1.34
CSPG5-203ENST00000456150 C4AP0C0L4 1744 aa23.43■■□□□ 1.34
CSPG5-203ENST00000456150 C4BP0C0L5 1744 aa23.43■■□□□ 1.34
CSPG5-203ENST00000456150 MROH5Q6ZUA9 1318 aa23.43■■□□□ 1.34
CSPG5-203ENST00000456150 SNW1Q13573 536 aaKnown RBP23.43■■□□□ 1.34
CSPG5-203ENST00000456150 PUM3Q15397 648 aaKnown RBP23.43■■□□□ 1.34
CSPG5-203ENST00000456150 CCDC102BQ68D86 513 aa23.43■■□□□ 1.34
CSPG5-203ENST00000456150 PLA2G4DQ86XP0 818 aa23.43■■□□□ 1.34
CSPG5-203ENST00000456150 KIAA1524Q8TCG1 905 aa23.43■■□□□ 1.34
CSPG5-203ENST00000456150 PRIMPOLQ96LW4 560 aa23.43■■□□□ 1.34
CSPG5-203ENST00000456150 TRIM5Q9C035 493 aa23.43■■□□□ 1.34
CSPG5-203ENST00000456150 PPFIA3O75145 1194 aa23.42■■□□□ 1.34
CSPG5-203ENST00000456150 IDH1O75874 414 aaKnown RBP23.42■■□□□ 1.34
CSPG5-203ENST00000456150 ZNF75DP51815 510 aa23.42■■□□□ 1.34
CSPG5-203ENST00000456150 ZNF34Q8IZ26 560 aa23.42■■□□□ 1.34
CSPG5-203ENST00000456150 FSIP1Q8NA03 581 aa23.42■■□□□ 1.34
CSPG5-203ENST00000456150 ENGASEQ8NFI3 743 aa23.42■■□□□ 1.34
CSPG5-203ENST00000456150 FBXO18Q8NFZ0 1043 aa23.42■■□□□ 1.34
CSPG5-203ENST00000456150 LPIN2Q92539 896 aa23.42■■□□□ 1.34
CSPG5-203ENST00000456150 PIH1D3Q9NQM4 214 aaKnown RBP23.42■■□□□ 1.34
CSPG5-203ENST00000456150 A0A1W2PQ27 194 aa23.41■■□□□ 1.34
CSPG5-203ENST00000456150 A0A1W2PQ64 194 aa23.41■■□□□ 1.34
CSPG5-203ENST00000456150 A0A1W2PQD8 194 aa23.41■■□□□ 1.34
CSPG5-203ENST00000456150 GOLGA6L19H0YKK7 550 aa23.41■■□□□ 1.34
CSPG5-203ENST00000456150 ONECUT3O60422 494 aaPredicted RBP23.41■■□□□ 1.34
CSPG5-203ENST00000456150 ADALQ6DHV7 355 aa23.41■■□□□ 1.34
CSPG5-203ENST00000456150 SEPT12Q8IYM1 358 aa23.41■■□□□ 1.34
CSPG5-203ENST00000456150 MRPS27Q92552 414 aaKnown RBP23.41■■□□□ 1.34
CSPG5-203ENST00000456150 UBN2Q6ZU65 1347 aa23.41■■□□□ 1.34
CSPG5-203ENST00000456150 YEATS4O95619 227 aa23.4■■□□□ 1.34
CSPG5-203ENST00000456150 PHKA1P46020 1223 aa23.4■■□□□ 1.34
CSPG5-203ENST00000456150 DRC7Q8IY82 874 aa23.4■■□□□ 1.34
CSPG5-203ENST00000456150 KCNG4Q8TDN1 519 aa23.4■■□□□ 1.34
CSPG5-203ENST00000456150 ANGEL1Q9UNK9 670 aaKnown RBP23.4■■□□□ 1.34
CSPG5-203ENST00000456150 ZNF532Q9HCE3 1301 aa23.4■■□□□ 1.34
CSPG5-203ENST00000456150 PDE6AP16499 860 aa23.4■■□□□ 1.34
CSPG5-203ENST00000456150 POLR3EQ9NVU0 708 aa23.4■■□□□ 1.34
CSPG5-203ENST00000456150 PCDHA7Q9UN72 937 aa23.4■■□□□ 1.34
CSPG5-203ENST00000456150 ZMYM6O95789 1325 aa23.4■■□□□ 1.34
CSPG5-203ENST00000456150 APPP05067 770 aa23.39■■□□□ 1.34
CSPG5-203ENST00000456150 FGFR2P21802 821 aa23.39■■□□□ 1.34
CSPG5-203ENST00000456150 CDC25BP30305 580 aa23.39■■□□□ 1.34
CSPG5-203ENST00000456150 STK38Q15208 465 aa23.39■■□□□ 1.34
CSPG5-203ENST00000456150 NBPF3Q9H094 633 aa23.39■■□□□ 1.34
CSPG5-203ENST00000456150 ANO10Q9NW15 660 aa23.39■■□□□ 1.34
CSPG5-203ENST00000456150 CDKL5O76039 1030 aa23.39■■□□□ 1.33
CSPG5-203ENST00000456150 SLC5A1P13866 664 aa23.39■■□□□ 1.33
CSPG5-203ENST00000456150 IQCB1Q15051 598 aa23.39■■□□□ 1.33
CSPG5-203ENST00000456150 SF3A1Q15459 793 aaKnown RBP23.39■■□□□ 1.33
CSPG5-203ENST00000456150 C17orf53Q8N3J3 647 aaPredicted RBP23.39■■□□□ 1.33
CSPG5-203ENST00000456150 LINC00301Q8NCQ3 95 aa23.39■■□□□ 1.33
CSPG5-203ENST00000456150 MYRIPQ8NFW9 859 aa23.39■■□□□ 1.33
CSPG5-203ENST00000456150 PYCARDQ9ULZ3 195 aa23.39■■□□□ 1.33
CSPG5-203ENST00000456150 DOCK2Q92608 1830 aa23.38■■□□□ 1.33
CSPG5-203ENST00000456150 LOC102724428A0A0B4J2F2 783 aa23.38■■□□□ 1.33
CSPG5-203ENST00000456150 PRKCSHP14314 528 aaPredicted RBP23.38■■□□□ 1.33
CSPG5-203ENST00000456150 PTGS1P23219 599 aa23.38■■□□□ 1.33
CSPG5-203ENST00000456150 SIK1P57059 783 aa23.38■■□□□ 1.33
CSPG5-203ENST00000456150 SARM1Q6SZW1 724 aa23.38■■□□□ 1.33
CSPG5-203ENST00000456150 TBC1D10CQ8IV04 446 aa23.38■■□□□ 1.33
CSPG5-203ENST00000456150 TCRBV5S4A2TA0A5A2 114 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 ATP6V1AP38606 617 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 ALX1Q15699 326 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 MYSM1Q5VVJ2 828 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 AIDAQ96BJ3 306 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 TMEM87BQ96K49 555 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 SH2B2O14492 632 aaPredicted RBP23.37■■□□□ 1.33
CSPG5-203ENST00000456150 ITPK1Q13572 414 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 OTUD7BQ6GQQ9 843 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 CPLX2Q6PUV4 134 aaKnown RBP23.37■■□□□ 1.33
CSPG5-203ENST00000456150 SYNE3Q6ZMZ3 975 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 C11orf57Q6ZUT1 292 aaPredicted RBP23.37■■□□□ 1.33
CSPG5-203ENST00000456150 FMR1NBQ8N0W7 255 aaPredicted RBP23.37■■□□□ 1.33
CSPG5-203ENST00000456150 PDCL3Q9H2J4 239 aa23.37■■□□□ 1.33
CSPG5-203ENST00000456150 METAP2P50579 478 aaKnown RBP eCLIP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms