RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 C1orf127Q8N9H9 656 aa6.98□□□□□ -1.29
R3HDM1-212ENST00000456040 TBC1D32Q96NH3 1257 aa6.98□□□□□ -1.29
R3HDM1-212ENST00000456040 KANSL3Q9P2N6 904 aa6.98□□□□□ -1.29
R3HDM1-212ENST00000456040 BRPF3Q9ULD4 1205 aa6.98□□□□□ -1.29
R3HDM1-212ENST00000456040 EIF4EBP3O60516 100 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-212ENST00000456040 TNFRSF21O75509 655 aa6.97□□□□□ -1.29
R3HDM1-212ENST00000456040 ZNF648Q5T619 568 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-212ENST00000456040 GJD3Q8N144 294 aa6.97□□□□□ -1.29
R3HDM1-212ENST00000456040 CEP120Q8N960 986 aa6.97□□□□□ -1.29
R3HDM1-212ENST00000456040 SNX29Q8TEQ0 813 aa6.97□□□□□ -1.29
R3HDM1-212ENST00000456040 SALL4Q9UJQ4 1053 aa6.97□□□□□ -1.29
R3HDM1-212ENST00000456040 NDUFB5O43674 189 aa6.96□□□□□ -1.3
R3HDM1-212ENST00000456040 PHACTR2O75167 634 aa6.96□□□□□ -1.3
R3HDM1-212ENST00000456040 ECM1Q16610 540 aa6.96□□□□□ -1.3
R3HDM1-212ENST00000456040 KSR1Q8IVT5 923 aa6.96□□□□□ -1.3
R3HDM1-212ENST00000456040 SMG8Q8ND04 991 aaKnown RBP6.96□□□□□ -1.3
R3HDM1-212ENST00000456040 SLC38A3Q99624 504 aa6.96□□□□□ -1.3
R3HDM1-212ENST00000456040 KRTAP4-2Q9BYR5 136 aa6.96□□□□□ -1.3
R3HDM1-212ENST00000456040 ARHGAP4P98171 946 aa6.95□□□□□ -1.3
R3HDM1-212ENST00000456040 USP26Q9BXU7 913 aa6.95□□□□□ -1.3
R3HDM1-212ENST00000456040 CHRDQ9H2X0 955 aa6.95□□□□□ -1.3
R3HDM1-212ENST00000456040 SUGCTQ9HAC7 445 aa6.95□□□□□ -1.3
R3HDM1-212ENST00000456040 PDE3BQ13370 1112 aa6.94□□□□□ -1.3
R3HDM1-212ENST00000456040 PLCL1Q15111 1095 aa6.94□□□□□ -1.3
R3HDM1-212ENST00000456040 ZAR1Q86SH2 424 aa6.94□□□□□ -1.3
R3HDM1-212ENST00000456040 FBLIM1Q8WUP2 373 aa6.94□□□□□ -1.3
R3HDM1-212ENST00000456040 CITED4Q96RK1 184 aa6.94□□□□□ -1.3
R3HDM1-212ENST00000456040 LRRC4CQ9HCJ2 640 aa6.94□□□□□ -1.3
R3HDM1-212ENST00000456040 FOXD3Q9UJU5 478 aaPredicted RBP6.94□□□□□ -1.3
R3HDM1-212ENST00000456040 GNEQ9Y223 722 aaKnown RBP6.94□□□□□ -1.3
R3HDM1-212ENST00000456040 SLC5A6Q9Y289 635 aa6.94□□□□□ -1.3
R3HDM1-212ENST00000456040 PDE2AO00408 941 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 EREGO14944 169 aa6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 NEFLP07196 543 aa6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 EDN3P14138 238 aa6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 IKBKEQ14164 716 aa6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 ZNF124Q15973 351 aa6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 EXOSC6Q5RKV6 272 aaKnown RBP6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 STK11IPQ8N1F8 1099 aa6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 TMPRSS13Q9BYE2 586 aa6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 PAK6Q9NQU5 681 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 DZANK1Q9NVP4 752 aa6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 AMOTL2Q9Y2J4 779 aa6.93□□□□□ -1.3
R3HDM1-212ENST00000456040 SOWAHDA6NJG2 315 aa6.92□□□□□ -1.3
R3HDM1-212ENST00000456040 MAP7Q14244 749 aa6.92□□□□□ -1.3
R3HDM1-212ENST00000456040 ZFYVE28Q9HCC9 887 aa6.92□□□□□ -1.3
R3HDM1-212ENST00000456040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.92□□□□□ -1.3
R3HDM1-212ENST00000456040 NFKBIEO00221 500 aa6.91□□□□□ -1.3
R3HDM1-212ENST00000456040 TIAF1O95411 115 aa6.91□□□□□ -1.3
R3HDM1-212ENST00000456040 ACPPP15309 386 aa6.91□□□□□ -1.3
R3HDM1-212ENST00000456040 ADAMTSL4Q6UY14 1074 aa6.91□□□□□ -1.3
R3HDM1-212ENST00000456040 TMC1Q8TDI8 760 aa6.91□□□□□ -1.3
R3HDM1-212ENST00000456040 OSMRQ99650 979 aa6.91□□□□□ -1.3
R3HDM1-212ENST00000456040 PRKAG2Q9UGJ0 569 aa6.91□□□□□ -1.3
R3HDM1-212ENST00000456040 PAPLNO95428 1278 aa6.9□□□□□ -1.3
R3HDM1-212ENST00000456040 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
R3HDM1-212ENST00000456040 TMEM102Q8N9M5 508 aaPredicted RBP6.9□□□□□ -1.3
R3HDM1-212ENST00000456040 BSNDQ8WZ55 320 aa6.9□□□□□ -1.3
R3HDM1-212ENST00000456040 FAM129BQ96TA1 746 aa6.9□□□□□ -1.3
R3HDM1-212ENST00000456040 BIN2Q9UBW5 565 aaPredicted RBP6.9□□□□□ -1.3
R3HDM1-212ENST00000456040 FAM170BA6NMN3 283 aa6.89□□□□□ -1.31
R3HDM1-212ENST00000456040 TRPA1O75762 1119 aa6.89□□□□□ -1.31
R3HDM1-212ENST00000456040 DRD2P14416 443 aa6.89□□□□□ -1.31
R3HDM1-212ENST00000456040 HP1BP3Q5SSJ5 553 aaPredicted RBP6.89□□□□□ -1.31
R3HDM1-212ENST00000456040 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
R3HDM1-212ENST00000456040 NFXL1Q6ZNB6 911 aa6.89□□□□□ -1.31
R3HDM1-212ENST00000456040 ZKSCAN3Q9BRR0 538 aa6.89□□□□□ -1.31
R3HDM1-212ENST00000456040 TRAIPQ9BWF2 469 aa6.89□□□□□ -1.31
R3HDM1-212ENST00000456040 ZC3H7BQ9UGR2 993 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-212ENST00000456040 LOC100289279A0A1B0GTE1 492 aa6.88□□□□□ -1.31
R3HDM1-212ENST00000456040 ADMP35318 185 aa6.88□□□□□ -1.31
R3HDM1-212ENST00000456040 SOX4Q06945 474 aaPredicted RBP6.88□□□□□ -1.31
R3HDM1-212ENST00000456040 KCNA1Q09470 495 aa6.88□□□□□ -1.31
R3HDM1-212ENST00000456040 COL19A1Q14993 1142 aa6.88□□□□□ -1.31
R3HDM1-212ENST00000456040 EZH1Q92800 747 aaPredicted RBP6.88□□□□□ -1.31
R3HDM1-212ENST00000456040 NXPE3Q969Y0 559 aa6.88□□□□□ -1.31
R3HDM1-212ENST00000456040 RBCK1Q9BYM8 510 aa6.88□□□□□ -1.31
R3HDM1-212ENST00000456040 SOX13Q9UN79 622 aa6.88□□□□□ -1.31
R3HDM1-212ENST00000456040 SOX1O00570 391 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 POLR3DP05423 398 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 ZNF792Q3KQV3 632 aa6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 PEAR1Q5VY43 1037 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 SPOCD1Q6ZMY3 1216 aa6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 ATG4DQ86TL0 474 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 GALNT12Q8IXK2 581 aa6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 TMEM40Q8WWA1 233 aa6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 FAM168AQ92567 244 aa6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 MISP3Q96FF7 219 aa6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 DMRTB1Q96MA1 342 aa6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 HHIPQ96QV1 700 aa6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 SOX17Q9H6I2 414 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 ZFYVE1Q9HBF4 777 aa6.87□□□□□ -1.31
R3HDM1-212ENST00000456040 PATL2C9JE40 543 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-212ENST00000456040 CPNE3O75131 537 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-212ENST00000456040 GSTM4Q03013 218 aa6.86□□□□□ -1.31
R3HDM1-212ENST00000456040 SHISA5Q8N114 240 aa6.86□□□□□ -1.31
R3HDM1-212ENST00000456040 C2CD4AQ8NCU7 369 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-212ENST00000456040 BCL7CQ8WUZ0 217 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-212ENST00000456040 BHLHE41Q9C0J9 482 aaPredicted RBP6.86□□□□□ -1.31
R3HDM1-212ENST00000456040 NIF3L1Q9GZT8 377 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms