RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ELP3Q9H9T3 547 aa18.09■□□□□ 0.49
LYSMD3-202ENST00000453259 KIAA0100Q14667 2235 aaKnown RBP18.08■□□□□ 0.49
LYSMD3-202ENST00000453259 MAP3K9P80192 1104 aa18.08■□□□□ 0.48
LYSMD3-202ENST00000453259 TAF1CQ15572 869 aaPredicted RBP18.08■□□□□ 0.48
LYSMD3-202ENST00000453259 SLC9C1Q4G0N8 1177 aa18.08■□□□□ 0.48
LYSMD3-202ENST00000453259 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.08■□□□□ 0.48
LYSMD3-202ENST00000453259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.08■□□□□ 0.48
LYSMD3-202ENST00000453259 CENPFP49454 3210 aa18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 MROH5Q6ZUA9 1318 aa18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 CCL15-CCL14A0A0B4J2E2 113 aa18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 PRMT2P55345 433 aa18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 VGLL4Q14135 290 aa18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 CCL15Q16663 113 aa18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 FKBP1CQ5VVH2 108 aa18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 BRI3BPQ8WY22 251 aa18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 MRIQ9BWK5 157 aa18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 TDRD3Q9H7E2 651 aaKnown RBP18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
LYSMD3-202ENST00000453259 AOX1Q06278 1338 aa18.06■□□□□ 0.48
LYSMD3-202ENST00000453259 SPDYE5A6NIY4 337 aa18.06■□□□□ 0.48
LYSMD3-202ENST00000453259 CETPP11597 493 aa18.06■□□□□ 0.48
LYSMD3-202ENST00000453259 CRKP46108 304 aa18.06■□□□□ 0.48
LYSMD3-202ENST00000453259 KIF22Q14807 665 aa18.06■□□□□ 0.48
LYSMD3-202ENST00000453259 FAM83AQ86UY5 434 aa18.06■□□□□ 0.48
LYSMD3-202ENST00000453259 FAM84BQ96KN1 310 aaPredicted RBP18.06■□□□□ 0.48
LYSMD3-202ENST00000453259 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.06■□□□□ 0.48
LYSMD3-202ENST00000453259 SUGT1Q9Y2Z0 365 aa18.06■□□□□ 0.48
LYSMD3-202ENST00000453259 RPAP1Q9BWH6 1393 aaPredicted RBP18.05■□□□□ 0.48
LYSMD3-202ENST00000453259 MAST3O60307 1309 aa18.05■□□□□ 0.48
LYSMD3-202ENST00000453259 PLIN1O60240 522 aa18.05■□□□□ 0.48
LYSMD3-202ENST00000453259 ERO1BQ86YB8 467 aa18.05■□□□□ 0.48
LYSMD3-202ENST00000453259 TEKT1Q969V4 418 aa18.05■□□□□ 0.48
LYSMD3-202ENST00000453259 TMOD2Q9NZR1 351 aa18.05■□□□□ 0.48
LYSMD3-202ENST00000453259 JAG2Q9Y219 1238 aa18.05■□□□□ 0.48
LYSMD3-202ENST00000453259 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 F6X3S4 739 aa18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 TLR2O60603 784 aa18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 EN2P19622 333 aaPredicted RBP18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 GYG1P46976 350 aa18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 CAVIN4Q5BKX8 364 aa18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 EPHA10Q5JZY3 1008 aa18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 VPS37DQ86XT2 251 aa18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 ZNF594Q96JF6 807 aaPredicted RBP18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 SRCIN1Q9C0H9 1055 aa18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 TMEM39BQ9GZU3 492 aa18.04■□□□□ 0.48
LYSMD3-202ENST00000453259 TCP10L2B9ZVM9 353 aa18.03■□□□□ 0.48
LYSMD3-202ENST00000453259 EXOSC9Q06265 439 aaKnown RBP18.03■□□□□ 0.48
LYSMD3-202ENST00000453259 SNAPC2Q13487 334 aa18.03■□□□□ 0.48
LYSMD3-202ENST00000453259 FBXO33Q7Z6M2 555 aa18.03■□□□□ 0.48
LYSMD3-202ENST00000453259 OTUD5Q96G74 571 aa18.03■□□□□ 0.48
LYSMD3-202ENST00000453259 PTCH2Q9Y6C5 1203 aa18.03■□□□□ 0.48
LYSMD3-202ENST00000453259 UTYO14607 1347 aa18.02■□□□□ 0.48
LYSMD3-202ENST00000453259 BRCA2P51587 3418 aa18.02■□□□□ 0.48
LYSMD3-202ENST00000453259 DCAF15Q66K64 600 aa18.02■□□□□ 0.48
LYSMD3-202ENST00000453259 FAM43AQ8N2R8 423 aa18.02■□□□□ 0.48
LYSMD3-202ENST00000453259 ZDHHC15Q96MV8 337 aa18.02■□□□□ 0.48
LYSMD3-202ENST00000453259 RIPOR2Q9Y4F9 1068 aa18.02■□□□□ 0.48
LYSMD3-202ENST00000453259 LACTBP83111 547 aaPredicted RBP18.01■□□□□ 0.47
LYSMD3-202ENST00000453259 PPIL2Q13356 520 aa18.01■□□□□ 0.47
LYSMD3-202ENST00000453259 SLC4A8Q2Y0W8 1093 aa18.01■□□□□ 0.47
LYSMD3-202ENST00000453259 RABL6Q3YEC7 729 aaPredicted RBP18.01■□□□□ 0.47
LYSMD3-202ENST00000453259 FXR1P51114 621 aaKnown RBP eCLIP18■□□□□ 0.47
LYSMD3-202ENST00000453259 CAP1Q01518 475 aa18■□□□□ 0.47
LYSMD3-202ENST00000453259 HHIPL2Q6UWX4 724 aa18■□□□□ 0.47
LYSMD3-202ENST00000453259 WRNIP1Q96S55 665 aa18■□□□□ 0.47
LYSMD3-202ENST00000453259 SNCAIPQ9Y6H5 919 aa18■□□□□ 0.47
LYSMD3-202ENST00000453259 FRAT2O75474 233 aaPredicted RBP17.99■□□□□ 0.47
LYSMD3-202ENST00000453259 PPATQ06203 517 aa17.99■□□□□ 0.47
LYSMD3-202ENST00000453259 CDAN1Q8IWY9 1227 aa17.99■□□□□ 0.47
LYSMD3-202ENST00000453259 NKX2-3Q8TAU0 364 aa17.99■□□□□ 0.47
LYSMD3-202ENST00000453259 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
LYSMD3-202ENST00000453259 PDE8BO95263 885 aa17.98■□□□□ 0.47
LYSMD3-202ENST00000453259 BTBD19C9JJ37 291 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 IRF6O14896 467 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 CAPN2P17655 700 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 HOXD10P28358 340 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 METTL24Q5JXM2 366 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 ANKRD23Q86SG2 305 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 VGLL2Q8N8G2 317 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 KAZALD1Q96I82 304 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 SUCLG2Q96I99 432 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 ZNF341Q9BYN7 854 aa17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 PUS3Q9BZE2 481 aaKnown RBP17.97■□□□□ 0.47
LYSMD3-202ENST00000453259 APOBEC3HQ6NTF7 200 aaKnown RBP17.96■□□□□ 0.47
LYSMD3-202ENST00000453259 MRS2Q9HD23 443 aa17.96■□□□□ 0.47
LYSMD3-202ENST00000453259 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
LYSMD3-202ENST00000453259 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
LYSMD3-202ENST00000453259 CHAF1AQ13111 956 aaPredicted RBP17.95■□□□□ 0.46
LYSMD3-202ENST00000453259 PUM3Q15397 648 aaKnown RBP17.95■□□□□ 0.46
LYSMD3-202ENST00000453259 C17orf99Q6UX52 265 aa17.95■□□□□ 0.46
LYSMD3-202ENST00000453259 WDR66Q8TBY9 1149 aa17.95■□□□□ 0.46
LYSMD3-202ENST00000453259 BICC1Q9H694 974 aaKnown RBP17.95■□□□□ 0.46
LYSMD3-202ENST00000453259 KCNH4Q9UQ05 1017 aa17.95■□□□□ 0.46
LYSMD3-202ENST00000453259 COLQQ9Y215 455 aaPredicted RBP17.95■□□□□ 0.46
LYSMD3-202ENST00000453259 GRIK5Q16478 980 aa17.94■□□□□ 0.46
LYSMD3-202ENST00000453259 FAM151AQ8WW52 585 aa17.94■□□□□ 0.46
LYSMD3-202ENST00000453259 ZKSCAN4Q969J2 545 aaPredicted RBP17.94■□□□□ 0.46
LYSMD3-202ENST00000453259 SRRDQ9UH36 339 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms