RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 CST9Q5W186 159 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 VGLL2Q8N8G2 317 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 RHPN1Q8TCX5 695 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 CCDC136Q96JN2 1154 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 MXD3Q9BW11 206 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 GLIS2Q9BZE0 524 aaPredicted RBP11.27□□□□□ -0.61
RFX3-207ENST00000449190 MYOZ2Q9NPC6 264 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 GNL3LQ9NVN8 582 aaKnown RBP11.27□□□□□ -0.61
RFX3-207ENST00000449190 HDAC9Q9UKV0 1011 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 TRAF5O00463 557 aa11.26□□□□□ -0.61
RFX3-207ENST00000449190 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
RFX3-207ENST00000449190 IFIT2P09913 472 aaKnown RBP11.26□□□□□ -0.61
RFX3-207ENST00000449190 FGFR2P21802 821 aa11.26□□□□□ -0.61
RFX3-207ENST00000449190 GYG1P46976 350 aa11.26□□□□□ -0.61
RFX3-207ENST00000449190 TIMM10P62072 90 aa11.26□□□□□ -0.61
RFX3-207ENST00000449190 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.61
RFX3-207ENST00000449190 TNNI3KQ59H18 835 aa11.26□□□□□ -0.61
RFX3-207ENST00000449190 ANKRD45Q5TZF3 282 aa11.26□□□□□ -0.61
RFX3-207ENST00000449190 KRT26Q7Z3Y9 468 aa11.26□□□□□ -0.61
RFX3-207ENST00000449190 FPGT-TNNI3KV9GXZ4 949 aa11.26□□□□□ -0.61
RFX3-207ENST00000449190 FAM205AQ6ZU69 1335 aa11.26□□□□□ -0.61
RFX3-207ENST00000449190 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
RFX3-207ENST00000449190 IGHDP01880 384 aa11.25□□□□□ -0.61
RFX3-207ENST00000449190 CCDC158Q5M9N0 1113 aa11.25□□□□□ -0.61
RFX3-207ENST00000449190 AACSQ86V21 672 aa11.25□□□□□ -0.61
RFX3-207ENST00000449190 KIAA0825Q8IV33 1275 aa11.25□□□□□ -0.61
RFX3-207ENST00000449190 FAM163AQ96GL9 167 aaPredicted RBP11.25□□□□□ -0.61
RFX3-207ENST00000449190 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
RFX3-207ENST00000449190 PPP4R2Q9NY27 417 aa11.25□□□□□ -0.61
RFX3-207ENST00000449190 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
RFX3-207ENST00000449190 SCN9AQ15858 1988 aa11.25□□□□□ -0.61
RFX3-207ENST00000449190 RASSF10A6NK89 507 aa11.24□□□□□ -0.61
RFX3-207ENST00000449190 CELF2O95319 508 aaKnown RBP11.24□□□□□ -0.61
RFX3-207ENST00000449190 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
RFX3-207ENST00000449190 SULF1Q8IWU6 871 aa11.24□□□□□ -0.61
RFX3-207ENST00000449190 CERS5Q8N5B7 392 aa11.24□□□□□ -0.61
RFX3-207ENST00000449190 MTMR14Q8NCE2 650 aa11.24□□□□□ -0.61
RFX3-207ENST00000449190 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
RFX3-207ENST00000449190 ABT1Q9ULW3 272 aaKnown RBP11.24□□□□□ -0.61
RFX3-207ENST00000449190 TLL2Q9Y6L7 1015 aa11.24□□□□□ -0.61
RFX3-207ENST00000449190 PITPNM2Q9BZ72 1349 aa11.24□□□□□ -0.61
RFX3-207ENST00000449190 CNTNAP1P78357 1384 aa11.24□□□□□ -0.61
RFX3-207ENST00000449190 WNT10BO00744 389 aa11.23□□□□□ -0.61
RFX3-207ENST00000449190 SMARCA5O60264 1052 aaPredicted RBP11.23□□□□□ -0.61
RFX3-207ENST00000449190 BCAMP50895 628 aa11.23□□□□□ -0.61
RFX3-207ENST00000449190 DLGAP5Q15398 846 aa11.23□□□□□ -0.61
RFX3-207ENST00000449190 NBPF9Q3BBW0 867 aa11.23□□□□□ -0.61
RFX3-207ENST00000449190 TTC39AQ5SRH9 613 aa11.23□□□□□ -0.61
RFX3-207ENST00000449190 ANGEL2Q5VTE6 544 aaKnown RBP11.23□□□□□ -0.61
RFX3-207ENST00000449190 GPATCH3Q96I76 525 aa11.23□□□□□ -0.61
RFX3-207ENST00000449190 ZBED3Q96IU2 234 aaPredicted RBP11.23□□□□□ -0.61
RFX3-207ENST00000449190 CCDC8Q9H0W5 538 aaPredicted RBP11.23□□□□□ -0.61
RFX3-207ENST00000449190 GGA3Q9NZ52 723 aa11.23□□□□□ -0.61
RFX3-207ENST00000449190 ASTN2O75129 1339 aaPredicted RBP11.22□□□□□ -0.61
RFX3-207ENST00000449190 UQCRFS1P1P0C7P4 283 aa11.22□□□□□ -0.61
RFX3-207ENST00000449190 VEGFBP49765 207 aa11.22□□□□□ -0.61
RFX3-207ENST00000449190 MFSD14BQ5SR56 506 aa11.22□□□□□ -0.61
RFX3-207ENST00000449190 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
RFX3-207ENST00000449190 SAPCD2Q86UD0 394 aa11.22□□□□□ -0.61
RFX3-207ENST00000449190 SMC5Q8IY18 1101 aa11.22□□□□□ -0.61
RFX3-207ENST00000449190 TBC1D22AQ8WUA7 517 aa11.22□□□□□ -0.61
RFX3-207ENST00000449190 EAF2Q96CJ1 260 aaPredicted RBP11.22□□□□□ -0.61
RFX3-207ENST00000449190 HHIPL1Q96JK4 782 aa11.22□□□□□ -0.61
RFX3-207ENST00000449190 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
RFX3-207ENST00000449190 SPEF2Q9C093 1822 aa11.22□□□□□ -0.61
RFX3-207ENST00000449190 ADM5C9JUS6 153 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 SEMA3EO15041 775 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 ADORA1P30542 326 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 ECE1P42892 770 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 CFAP100Q494V2 611 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 CCDC102BQ68D86 513 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 DLK2Q6UY11 383 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 C2orf69Q8N8R5 385 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 DBNDD2Q9BQY9 259 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 ZNF408Q9H9D4 720 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 GBA2Q9HCG7 927 aaPredicted RBP11.21□□□□□ -0.61
RFX3-207ENST00000449190 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 DENND2AQ9ULE3 1009 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 JAG2Q9Y219 1238 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 SUGT1Q9Y2Z0 365 aa11.21□□□□□ -0.61
RFX3-207ENST00000449190 WDR33Q9C0J8 1336 aaKnown RBP11.2□□□□□ -0.62
RFX3-207ENST00000449190 F8W031 263 aaPredicted RBP11.2□□□□□ -0.62
RFX3-207ENST00000449190 PHKA1P46020 1223 aa11.2□□□□□ -0.62
RFX3-207ENST00000449190 HDLBPQ00341 1268 aaKnown RBP11.2□□□□□ -0.62
RFX3-207ENST00000449190 NUCB1Q02818 461 aa11.2□□□□□ -0.62
RFX3-207ENST00000449190 CHAF1AQ13111 956 aaPredicted RBP11.2□□□□□ -0.62
RFX3-207ENST00000449190 CHD1LQ86WJ1 897 aa11.2□□□□□ -0.62
RFX3-207ENST00000449190 WDR66Q8TBY9 1149 aa11.2□□□□□ -0.62
RFX3-207ENST00000449190 CDCA5Q96FF9 252 aa11.2□□□□□ -0.62
RFX3-207ENST00000449190 PRMT6Q96LA8 375 aaPredicted RBP11.2□□□□□ -0.62
RFX3-207ENST00000449190 SERPINA10Q9UK55 444 aa11.2□□□□□ -0.62
RFX3-207ENST00000449190 TTF2Q9UNY4 1162 aaKnown RBP11.2□□□□□ -0.62
RFX3-207ENST00000449190 IQSEC3Q9UPP2 1182 aaPredicted RBP11.2□□□□□ -0.62
RFX3-207ENST00000449190 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.2□□□□□ -0.62
RFX3-207ENST00000449190 PSME4Q14997 1843 aa11.19□□□□□ -0.62
RFX3-207ENST00000449190 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
RFX3-207ENST00000449190 MYO1BO43795 1136 aa11.19□□□□□ -0.62
RFX3-207ENST00000449190 FKBP1BP68106 108 aa11.19□□□□□ -0.62
RFX3-207ENST00000449190 APOBEC3FQ8IUX4 373 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms