RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 USP28Q96RU2 1077 aa18■□□□□ 0.47
SIK3-205ENST00000446921 KDM4CQ9H3R0 1056 aa18■□□□□ 0.47
SIK3-205ENST00000446921 EIF4E1BA6NMX2 242 aaKnown RBP18■□□□□ 0.47
SIK3-205ENST00000446921 LONRF3Q496Y0 759 aa17.99■□□□□ 0.47
SIK3-205ENST00000446921 KCTD16Q68DU8 428 aa17.99■□□□□ 0.47
SIK3-205ENST00000446921 EIF2AK4Q9P2K8 1649 aaKnown RBP17.99■□□□□ 0.47
SIK3-205ENST00000446921 ADGRF5Q8IZF2 1346 aa17.99■□□□□ 0.47
SIK3-205ENST00000446921 POLR3DP05423 398 aaPredicted RBP17.99■□□□□ 0.47
SIK3-205ENST00000446921 SYNE3Q6ZMZ3 975 aa17.99■□□□□ 0.47
SIK3-205ENST00000446921 MYLK4Q86YV6 388 aaPredicted RBP17.99■□□□□ 0.47
SIK3-205ENST00000446921 SMARCC2Q8TAQ2 1214 aa17.99■□□□□ 0.47
SIK3-205ENST00000446921 RPS6KL1Q9Y6S9 549 aa17.99■□□□□ 0.47
SIK3-205ENST00000446921 MEFVO15553 781 aaPredicted RBP17.99■□□□□ 0.47
SIK3-205ENST00000446921 SPECC1Q5M775 1068 aa17.99■□□□□ 0.47
SIK3-205ENST00000446921 NCAPH2Q6IBW4 605 aa17.99■□□□□ 0.47
SIK3-205ENST00000446921 AATKQ6ZMQ8 1374 aa17.99■□□□□ 0.47
SIK3-205ENST00000446921 MTF1Q14872 753 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 SLC35F6Q8N357 371 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 TUBBP07437 444 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 MCM3P25205 808 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 ZRSR2Q15696 482 aaKnown RBP17.98■□□□□ 0.47
SIK3-205ENST00000446921 ZNF483Q8TF39 744 aaPredicted RBP17.98■□□□□ 0.47
SIK3-205ENST00000446921 SHROOM2Q13796 1616 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 SF3A3Q12874 501 aaKnown RBP eCLIP17.98■□□□□ 0.473e-7■■■■□ 23.5
SIK3-205ENST00000446921 SND1Q7KZF4 910 aaKnown RBP eCLIP17.98■□□□□ 0.47
SIK3-205ENST00000446921 STK11IPQ8N1F8 1099 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 NOA1Q8NC60 698 aaKnown RBP17.98■□□□□ 0.47
SIK3-205ENST00000446921 UHRF1BP1LA0JNW5 1464 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 MED14O60244 1454 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 GOLGA6L10A6NI86 522 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 CCT4P50991 539 aaKnown RBP17.98■□□□□ 0.47
SIK3-205ENST00000446921 MYL5Q02045 173 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 CREB3L3Q68CJ9 461 aa17.98■□□□□ 0.47
SIK3-205ENST00000446921 CDC5LQ99459 802 aaKnown RBP17.98■□□□□ 0.47
SIK3-205ENST00000446921 NAPGQ99747 312 aaPredicted RBP17.98■□□□□ 0.47
SIK3-205ENST00000446921 UBTFL1P0CB47 393 aaPredicted RBP17.97■□□□□ 0.47
SIK3-205ENST00000446921 MATR3P43243 847 aaKnown RBP eCLIP17.97■□□□□ 0.476e-7■■■□□ 18.6
SIK3-205ENST00000446921 KCNB1Q14721 858 aa17.97■□□□□ 0.47
SIK3-205ENST00000446921 FCHSD1Q86WN1 690 aa17.97■□□□□ 0.47
SIK3-205ENST00000446921 BORCS6Q96GS4 357 aa17.97■□□□□ 0.47
SIK3-205ENST00000446921 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
SIK3-205ENST00000446921 C11orf91Q3C1V1 193 aa17.97■□□□□ 0.47
SIK3-205ENST00000446921 ZSWIM6Q9HCJ5 1215 aa17.97■□□□□ 0.47
SIK3-205ENST00000446921 CDHR2Q9BYE9 1310 aa17.97■□□□□ 0.47
SIK3-205ENST00000446921 PLA2R1Q13018 1463 aa17.97■□□□□ 0.47
SIK3-205ENST00000446921 NDUFA8P51970 172 aa17.96■□□□□ 0.47
SIK3-205ENST00000446921 KIF3BO15066 747 aa17.96■□□□□ 0.47
SIK3-205ENST00000446921 EIF3HO15372 352 aaKnown RBP eCLIP17.96■□□□□ 0.47
SIK3-205ENST00000446921 NPM1P06748 294 aaKnown RBP eCLIP17.96■□□□□ 0.47
SIK3-205ENST00000446921 CDC25CP30307 473 aa17.96■□□□□ 0.47
SIK3-205ENST00000446921 RPS6KA3P51812 740 aa17.96■□□□□ 0.47
SIK3-205ENST00000446921 MSL1Q68DK7 614 aa17.96■□□□□ 0.47
SIK3-205ENST00000446921 TRIM4Q9C037 500 aa17.96■□□□□ 0.47
SIK3-205ENST00000446921 SOWAHDA6NJG2 315 aa17.96■□□□□ 0.46
SIK3-205ENST00000446921 PYGLP06737 847 aa17.96■□□□□ 0.46
SIK3-205ENST00000446921 NLRP12P59046 1061 aa17.96■□□□□ 0.46
SIK3-205ENST00000446921 CAPRIN2Q6IMN6 1127 aaKnown RBP17.96■□□□□ 0.46
SIK3-205ENST00000446921 PARP9Q8IXQ6 854 aa17.96■□□□□ 0.46
SIK3-205ENST00000446921 MRPL44Q9H9J2 332 aaKnown RBP17.96■□□□□ 0.46
SIK3-205ENST00000446921 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
SIK3-205ENST00000446921 TUBB4BP68371 445 aa17.95■□□□□ 0.46
SIK3-205ENST00000446921 MYO1EQ12965 1108 aa17.95■□□□□ 0.46
SIK3-205ENST00000446921 SLC40A1Q9NP59 571 aa17.95■□□□□ 0.46
SIK3-205ENST00000446921 STX10O60499 249 aa17.95■□□□□ 0.46
SIK3-205ENST00000446921 ARMC9Q7Z3E5 817 aa17.95■□□□□ 0.46
SIK3-205ENST00000446921 GPATCH3Q96I76 525 aa17.95■□□□□ 0.46
SIK3-205ENST00000446921 DDX20Q9UHI6 824 aaKnown RBP17.95■□□□□ 0.46
SIK3-205ENST00000446921 GUCA1BQ9UMX6 200 aa17.95■□□□□ 0.46
SIK3-205ENST00000446921 USP4Q13107 963 aa17.95■□□□□ 0.46
SIK3-205ENST00000446921 OPA1O60313 960 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 SYF2O95926 243 aaKnown RBP17.94■□□□□ 0.46
SIK3-205ENST00000446921 ST3GAL1Q11201 340 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 PNMA8AQ86V59 439 aaPredicted RBP17.94■□□□□ 0.46
SIK3-205ENST00000446921 MYBL1P10243 752 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 GNPTABQ3T906 1256 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 LRRC23Q53EV4 343 aaPredicted RBP17.94■□□□□ 0.46
SIK3-205ENST00000446921 MYSM1Q5VVJ2 828 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 CCDC50Q8IVM0 306 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 VSTM4Q8IW00 320 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 A1CFQ9NQ94 594 aaKnown RBP17.94■□□□□ 0.46
SIK3-205ENST00000446921 RESTQ13127 1097 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 MTA1Q13330 715 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 HPCAL4Q9UM19 191 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
SIK3-205ENST00000446921 PTPRGP23470 1445 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 REREQ9P2R6 1566 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 E7EVH7 732 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 SLC8A1P32418 973 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 THEMIS2Q5TEJ8 643 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 G2E3Q7L622 706 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 C3orf20Q8ND61 904 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 PPANQ9NQ55 473 aaKnown RBP17.93■□□□□ 0.46
SIK3-205ENST00000446921 RAB21Q9UL25 225 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 TPP2P29144 1249 aaPredicted RBP17.93■□□□□ 0.46
SIK3-205ENST00000446921 DDR1Q08345 913 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 KCNB2Q92953 911 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 HSF2BPO75031 334 aa17.93■□□□□ 0.46
SIK3-205ENST00000446921 MARCKSP29966 332 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms