RNA–Protein interactions for RNA: ENST00000446833.1

SDCCAG3-206, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 3

Gene SDCCAG3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-206ENST00000446833 IGF2BP3O00425 579 aaKnown RBP eCLIP21.6■■□□□ 1.05
SDCCAG3-206ENST00000446833 PDE8BO95263 885 aa21.6■■□□□ 1.05
SDCCAG3-206ENST00000446833 TNNI2P48788 182 aa21.6■■□□□ 1.05
SDCCAG3-206ENST00000446833 LRRC24Q50LG9 513 aa21.6■■□□□ 1.05
SDCCAG3-206ENST00000446833 TESPA1A2RU30 521 aaPredicted RBP21.59■■□□□ 1.05
SDCCAG3-206ENST00000446833 FRAT2O75474 233 aaPredicted RBP21.59■■□□□ 1.05
SDCCAG3-206ENST00000446833 VGLL2Q8N8G2 317 aa21.59■■□□□ 1.05
SDCCAG3-206ENST00000446833 TEPSINQ96N21 525 aa21.59■■□□□ 1.05
SDCCAG3-206ENST00000446833 MRIQ9BWK5 157 aa21.59■■□□□ 1.05
SDCCAG3-206ENST00000446833 USP44Q9H0E7 712 aa21.59■■□□□ 1.05
SDCCAG3-206ENST00000446833 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.59■■□□□ 1.05
SDCCAG3-206ENST00000446833 LAMB1P07942 1786 aa21.59■■□□□ 1.05
SDCCAG3-206ENST00000446833 KIF16BQ96L93 1317 aa21.58■■□□□ 1.05
SDCCAG3-206ENST00000446833 GJA5P36382 358 aa21.58■■□□□ 1.05
SDCCAG3-206ENST00000446833 SSH1Q8WYL5 1049 aa21.58■■□□□ 1.05
SDCCAG3-206ENST00000446833 SUGT1Q9Y2Z0 365 aa21.58■■□□□ 1.05
SDCCAG3-206ENST00000446833 TEKT1Q969V4 418 aa21.57■■□□□ 1.04
SDCCAG3-206ENST00000446833 ARAP2Q8WZ64 1704 aa21.57■■□□□ 1.04
SDCCAG3-206ENST00000446833 TCP10L2B9ZVM9 353 aa21.56■■□□□ 1.04
SDCCAG3-206ENST00000446833 CHAF1AQ13111 956 aaPredicted RBP21.56■■□□□ 1.04
SDCCAG3-206ENST00000446833 PUM3Q15397 648 aaKnown RBP21.56■■□□□ 1.04
SDCCAG3-206ENST00000446833 IQSEC3Q9UPP2 1182 aaPredicted RBP21.56■■□□□ 1.04
SDCCAG3-206ENST00000446833 CENPFP49454 3210 aa21.56■■□□□ 1.04
SDCCAG3-206ENST00000446833 IFIT1P09914 478 aaKnown RBP21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 BCAMP50895 628 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 SLFN5Q08AF3 891 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 GRIK5Q16478 980 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 ALDH1L2Q3SY69 923 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 OPTNQ96CV9 577 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 ERO1AQ96HE7 468 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 TMEM39BQ9GZU3 492 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 ELP3Q9H9T3 547 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 TRIM17Q9Y577 477 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 MAST3O60307 1309 aa21.55■■□□□ 1.04
SDCCAG3-206ENST00000446833 FGFR2P21802 821 aa21.54■■□□□ 1.04
SDCCAG3-206ENST00000446833 MAP3K9P80192 1104 aa21.54■■□□□ 1.04
SDCCAG3-206ENST00000446833 CRHR2Q13324 411 aa21.54■■□□□ 1.04
SDCCAG3-206ENST00000446833 FKBP1CQ5VVH2 108 aa21.54■■□□□ 1.04
SDCCAG3-206ENST00000446833 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.54■■□□□ 1.04
SDCCAG3-206ENST00000446833 OTOP1Q7RTM1 612 aa21.54■■□□□ 1.04
SDCCAG3-206ENST00000446833 MS4A4AQ96JQ5 239 aa21.54■■□□□ 1.04
SDCCAG3-206ENST00000446833 ZDHHC15Q96MV8 337 aa21.54■■□□□ 1.04
SDCCAG3-206ENST00000446833 PTPN18Q99952 460 aa21.54■■□□□ 1.04
SDCCAG3-206ENST00000446833 INTS3Q68E01 1043 aaKnown RBP21.53■■□□□ 1.04
SDCCAG3-206ENST00000446833 FAM83AQ86UY5 434 aa21.53■■□□□ 1.04
SDCCAG3-206ENST00000446833 CDAN1Q8IWY9 1227 aa21.53■■□□□ 1.04
SDCCAG3-206ENST00000446833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.53■■□□□ 1.04
SDCCAG3-206ENST00000446833 KLHDC4Q8TBB5 520 aa21.53■■□□□ 1.04
SDCCAG3-206ENST00000446833 HOOK2Q96ED9 719 aa21.53■■□□□ 1.04
SDCCAG3-206ENST00000446833 TMOD2Q9NZR1 351 aa21.53■■□□□ 1.04
SDCCAG3-206ENST00000446833 CSADQ9Y600 493 aa21.53■■□□□ 1.04
SDCCAG3-206ENST00000446833 EYA2O00167 538 aa21.52■■□□□ 1.04
SDCCAG3-206ENST00000446833 GTF2A2P52657 109 aa21.52■■□□□ 1.04
SDCCAG3-206ENST00000446833 VGLL4Q14135 290 aa21.52■■□□□ 1.04
SDCCAG3-206ENST00000446833 RFX5P48382 616 aaPredicted RBP21.51■■□□□ 1.03
SDCCAG3-206ENST00000446833 SP3Q02447 781 aa21.51■■□□□ 1.03
SDCCAG3-206ENST00000446833 PRPF38BQ5VTL8 546 aaKnown RBP21.51■■□□□ 1.03
SDCCAG3-206ENST00000446833 HHIPL2Q6UWX4 724 aa21.51■■□□□ 1.03
SDCCAG3-206ENST00000446833 LPIN2Q92539 896 aa21.51■■□□□ 1.03
SDCCAG3-206ENST00000446833 MKI67P46013 3256 aaKnown RBP21.5■■□□□ 1.03
SDCCAG3-206ENST00000446833 SLC5A1P13866 664 aa21.5■■□□□ 1.03
SDCCAG3-206ENST00000446833 APOBEC3HQ6NTF7 200 aaKnown RBP21.5■■□□□ 1.03
SDCCAG3-206ENST00000446833 WDR66Q8TBY9 1149 aa21.5■■□□□ 1.03
SDCCAG3-206ENST00000446833 FBXO3Q9UK99 471 aa21.5■■□□□ 1.03
SDCCAG3-206ENST00000446833 OTOFQ9HC10 1997 aa21.5■■□□□ 1.03
SDCCAG3-206ENST00000446833 CT47B1P0C2W7 299 aaPredicted RBP21.49■■□□□ 1.03
SDCCAG3-206ENST00000446833 CD99L2Q8TCZ2 262 aa21.49■■□□□ 1.03
SDCCAG3-206ENST00000446833 BRI3BPQ8WY22 251 aa21.49■■□□□ 1.03
SDCCAG3-206ENST00000446833 EFCC1Q9HA90 598 aa21.49■■□□□ 1.03
SDCCAG3-206ENST00000446833 SMC4Q9NTJ3 1288 aa21.49■■□□□ 1.03
SDCCAG3-206ENST00000446833 PTPN22Q9Y2R2 807 aa21.49■■□□□ 1.03
SDCCAG3-206ENST00000446833 CCL15-CCL14A0A0B4J2E2 113 aa21.48■■□□□ 1.03
SDCCAG3-206ENST00000446833 SPDYE5A6NIY4 337 aa21.48■■□□□ 1.03
SDCCAG3-206ENST00000446833 CACNB3P54284 484 aa21.48■■□□□ 1.03
SDCCAG3-206ENST00000446833 ARHGEF6Q15052 776 aa21.48■■□□□ 1.03
SDCCAG3-206ENST00000446833 CCL15Q16663 113 aa21.48■■□□□ 1.03
SDCCAG3-206ENST00000446833 CNKSR2Q8WXI2 1034 aa21.48■■□□□ 1.03
SDCCAG3-206ENST00000446833 ZFYVE28Q9HCC9 887 aa21.48■■□□□ 1.03
SDCCAG3-206ENST00000446833 HDAC5Q9UQL6 1122 aa21.48■■□□□ 1.03
SDCCAG3-206ENST00000446833 KIAA0100Q14667 2235 aaKnown RBP21.48■■□□□ 1.03
SDCCAG3-206ENST00000446833 DCAF15Q66K64 600 aa21.47■■□□□ 1.03
SDCCAG3-206ENST00000446833 ATG9AQ7Z3C6 839 aa21.47■■□□□ 1.03
SDCCAG3-206ENST00000446833 ERO1BQ86YB8 467 aa21.47■■□□□ 1.03
SDCCAG3-206ENST00000446833 TRMT2AQ8IZ69 625 aaKnown RBP21.47■■□□□ 1.03
SDCCAG3-206ENST00000446833 OTUD5Q96G74 571 aa21.47■■□□□ 1.03
SDCCAG3-206ENST00000446833 RPAP1Q9BWH6 1393 aaPredicted RBP21.47■■□□□ 1.03
SDCCAG3-206ENST00000446833 WDHD1O75717 1129 aaPredicted RBP21.46■■□□□ 1.03
SDCCAG3-206ENST00000446833 CIAO1O76071 339 aa21.46■■□□□ 1.03
SDCCAG3-206ENST00000446833 UBTFL1P0CB47 393 aaPredicted RBP21.46■■□□□ 1.03
SDCCAG3-206ENST00000446833 TAF1CQ15572 869 aaPredicted RBP21.46■■□□□ 1.03
SDCCAG3-206ENST00000446833 CDCA7LQ96GN5 454 aa21.46■■□□□ 1.03
SDCCAG3-206ENST00000446833 WRNIP1Q96S55 665 aa21.46■■□□□ 1.03
SDCCAG3-206ENST00000446833 ZCCHC17Q9NP64 241 aaKnown RBP21.46■■□□□ 1.03
SDCCAG3-206ENST00000446833 CETPP11597 493 aa21.45■■□□□ 1.02
SDCCAG3-206ENST00000446833 ARMC5Q96C12 935 aa21.45■■□□□ 1.02
SDCCAG3-206ENST00000446833 GNL3LQ9NVN8 582 aaKnown RBP21.45■■□□□ 1.02
SDCCAG3-206ENST00000446833 CEP126Q9P2H0 1117 aa21.45■■□□□ 1.02
SDCCAG3-206ENST00000446833 SNCAIPQ9Y6H5 919 aa21.45■■□□□ 1.02
SDCCAG3-206ENST00000446833 BRCA2P51587 3418 aa21.43■■□□□ 1.02
SDCCAG3-206ENST00000446833 ZBTB22O15209 634 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms