RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 CCDC14Q49A88 953 aa15.53■□□□□ 0.08
LRCH3-206ENST00000438796 KMT5BQ4FZB7 885 aa15.53■□□□□ 0.08
LRCH3-206ENST00000438796 SEC62Q99442 399 aaKnown RBP15.53■□□□□ 0.08
LRCH3-206ENST00000438796 CCDC77Q9BR77 488 aa15.53■□□□□ 0.08
LRCH3-206ENST00000438796 PRPHP41219 470 aa15.53■□□□□ 0.08
LRCH3-206ENST00000438796 MSL1Q68DK7 614 aa15.53■□□□□ 0.08
LRCH3-206ENST00000438796 VWA3AA6NCI4 1184 aa15.52■□□□□ 0.08
LRCH3-206ENST00000438796 IL2RBP14784 551 aa15.52■□□□□ 0.08
LRCH3-206ENST00000438796 UBLCP1Q8WVY7 318 aaPredicted RBP15.52■□□□□ 0.08
LRCH3-206ENST00000438796 EFCAB5A4FU69 1503 aa15.52■□□□□ 0.08
LRCH3-206ENST00000438796 MRPS27Q92552 414 aaKnown RBP15.52■□□□□ 0.08
LRCH3-206ENST00000438796 FAM160A1Q05DH4 1040 aa15.52■□□□□ 0.08
LRCH3-206ENST00000438796 WDR44Q5JSH3 913 aa15.52■□□□□ 0.08
LRCH3-206ENST00000438796 CCDC129Q6ZRS4 1044 aa15.52■□□□□ 0.07
LRCH3-206ENST00000438796 TEX11Q8IYF3 940 aa15.52■□□□□ 0.07
LRCH3-206ENST00000438796 RSPH14Q9UHP6 348 aa15.52■□□□□ 0.07
LRCH3-206ENST00000438796 RHOXF2BP0C7M4 288 aa15.52■□□□□ 0.07
LRCH3-206ENST00000438796 RHOXF2Q9BQY4 288 aa15.52■□□□□ 0.07
LRCH3-206ENST00000438796 KIF5AQ12840 1032 aa15.52■□□□□ 0.07
LRCH3-206ENST00000438796 ZEB2O60315 1214 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 EYA3Q99504 573 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 TIAM1Q13009 1591 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 ZHX1Q9UKY1 873 aaPredicted RBP15.51■□□□□ 0.07
LRCH3-206ENST00000438796 SKILP12757 684 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 NCKAP5LQ9HCH0 1330 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 IL15P40933 162 aaPredicted RBP15.51■□□□□ 0.07
LRCH3-206ENST00000438796 LMBR1Q8WVP7 490 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 DACT1Q9NYF0 836 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 HSPA2P54652 639 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 LEO1Q8WVC0 666 aaPredicted RBP15.51■□□□□ 0.07
LRCH3-206ENST00000438796 EPSTI1Q96J88 318 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 CCDC42Q96M95 316 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 TRIM7Q9C029 511 aa15.51■□□□□ 0.07
LRCH3-206ENST00000438796 BICC1Q9H694 974 aaKnown RBP15.51■□□□□ 0.07
LRCH3-206ENST00000438796 ZNF569Q5MCW4 686 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 CPXCR1Q8N123 301 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 MAPK8IP1Q9UQF2 711 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 TBC1D7Q9P0N9 293 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 PLCG2P16885 1265 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 TRPC3Q13507 836 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 BTG4Q9NY30 223 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 BMP15O95972 392 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 MNAT1P51948 309 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 IVNS1ABPQ9Y6Y0 642 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 PPIP5K1Q6PFW1 1433 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 RRP9O43818 475 aaKnown RBP15.5■□□□□ 0.07
LRCH3-206ENST00000438796 STX10O60499 249 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 CALML3P27482 149 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 SATB1Q01826 763 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 GOLGA1Q92805 767 aa15.5■□□□□ 0.07
LRCH3-206ENST00000438796 SPTLC2O15270 562 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 GMNNO75496 209 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 ATP2A2P16615 1042 aaKnown RBP15.49■□□□□ 0.07
LRCH3-206ENST00000438796 TTC36A6NLP5 189 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 KRT19P08727 400 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 CALCOCO1Q9P1Z2 691 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 MAGI1Q96QZ7 1491 aaPredicted RBP15.49■□□□□ 0.07
LRCH3-206ENST00000438796 BICDL2A1A5D9 508 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 RNF113AO15541 343 aaKnown RBP15.49■□□□□ 0.07
LRCH3-206ENST00000438796 EPB41P11171 864 aaKnown RBP15.49■□□□□ 0.07
LRCH3-206ENST00000438796 STRN3Q13033 797 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 ESYT1Q9BSJ8 1104 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 MBD4O95243 580 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 ABL1P00519 1130 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 SLC8A3P57103 927 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 AKAP4Q5JQC9 854 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 ANKS4BQ8N8V4 417 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 C8orf58Q8NAV2 365 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 USTQ9Y2C2 406 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 RAD51AP2Q09MP3 1159 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 NCAPH2Q6IBW4 605 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 CNBD1Q8NA66 436 aa15.49■□□□□ 0.07
LRCH3-206ENST00000438796 NPHP3Q7Z494 1330 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 HGSO14964 777 aaPredicted RBP15.48■□□□□ 0.07
LRCH3-206ENST00000438796 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 LMTK3Q96Q04 1460 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 GNA11P29992 359 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 KSR2Q6VAB6 950 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 FAM204AQ9H8W3 233 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 STK32BQ9NY57 414 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 GNAT2P19087 354 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 CFAP65Q6ZU64 1925 aaKnown RBP15.48■□□□□ 0.07
LRCH3-206ENST00000438796 SEL1L2Q5TEA6 688 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 TRAF5O00463 557 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 NUCB1Q02818 461 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 ARMT1Q9H993 441 aa15.48■□□□□ 0.07
LRCH3-206ENST00000438796 HSPA1LP34931 641 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 ANKRD2Q9GZV1 360 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 AATFQ9NY61 560 aaKnown RBP eCLIP15.47■□□□□ 0.07
LRCH3-206ENST00000438796 SF3A3Q12874 501 aaKnown RBP eCLIP15.47■□□□□ 0.07
LRCH3-206ENST00000438796 PDE1AP54750 535 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 CUL4BQ13620 913 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 NOP9Q86U38 636 aaKnown RBP15.47■□□□□ 0.07
LRCH3-206ENST00000438796 ARHGEF10LQ9HCE6 1279 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 INF2Q27J81 1249 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 SV2BQ7L1I2 683 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 STMN4Q9H169 189 aaPredicted RBP15.47■□□□□ 0.07
LRCH3-206ENST00000438796 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 RNF169Q8NCN4 708 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 SPOPO43791 374 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms