RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SEMA3EO15041 775 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 FRAT2O75474 233 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 SURF6O75683 361 aaKnown RBP7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 EGFRP00533 1210 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 USP17L8P0C7I0 530 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 HSPA6P17066 643 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 TFCP2Q12800 502 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 FSTL1Q12841 308 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 CHAF1AQ13111 956 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 G3BP1Q13283 466 aaKnown RBP eCLIP7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 CAVIN4Q5BKX8 364 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 DACT2Q5SW24 774 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 DLK2Q6UY11 383 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 KIAA0825Q8IV33 1275 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 SLAIN1Q8ND83 568 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 DPF2Q92785 391 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 NEUROD6Q96NK8 337 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 COPRSQ9NQ92 184 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 SCAF8Q9UPN6 1271 aaKnown RBP7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 IRS2Q9Y4H2 1338 aa7.16□□□□□ -1.26
HMGB3P24-201ENST00000433260 TESPA1A2RU30 521 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 CIAO1O76071 339 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 SASH1O94885 1247 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 ITGBL1O95965 494 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 IFIT1P09914 478 aaKnown RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 SLC5A1P13866 664 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 IL1R1P14778 569 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 RPS12P25398 132 aaKnown RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 IL15P40933 162 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 OS9Q13438 667 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 SCARF1Q14162 830 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 MVPQ14764 893 aaKnown RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 ATP2B3Q16720 1220 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 TPRNQ4KMQ1 711 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 STRIP1Q5VSL9 837 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 C15orf52Q6ZUT6 534 aaKnown RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 USP48Q86UV5 1035 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 LDHDQ86WU2 507 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 VGLL2Q8N8G2 317 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 AGBL3Q8NEM8 1001 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 TDRD7Q8NHU6 1098 aaKnown RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 TRPM4Q8TD43 1214 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 OXER1Q8TDS5 423 aa7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 DAXXQ9UER7 740 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P24-201ENST00000433260 PSME4Q14997 1843 aa7.15□□□□□ -1.27
HMGB3P24-201ENST00000433260 APBB1O00213 710 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 TRAF5O00463 557 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 ASTN2O75129 1339 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 SLC34A2O95436 690 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 FGFR2P21802 821 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 ADORA1P30542 326 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 APLP1P51693 650 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 RBM5P52756 815 aaKnown RBP eCLIP7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 MTX1Q13505 466 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 PUM3Q15397 648 aaKnown RBP7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 KIF4BQ2VIQ3 1234 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 FBXO33Q7Z6M2 555 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 OGFOD1Q8N543 542 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 CERS5Q8N5B7 392 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 SSH3Q8TE77 659 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 LPIN2Q92539 896 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 DCPSQ96C86 337 aaKnown RBP7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 GMLQ99445 158 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 GLIS2Q9BZE0 524 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 ZNF408Q9H9D4 720 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 MYOZ2Q9NPC6 264 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 DDX19BQ9UMR2 479 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 PCDHAC2Q9Y5I4 1007 aa7.14□□□□□ -1.27
HMGB3P24-201ENST00000433260 A0A1B0GUL7 405 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 PDE3AQ14432 1141 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 NBPF9Q3BBW0 867 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 MFSD14BQ5SR56 506 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 GORABQ5T7V8 394 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 ANGEL2Q5VTE6 544 aaKnown RBP7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 CEP85Q6P2H3 762 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 CDC37L1Q7L3B6 337 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 PTCD2Q8WV60 388 aaKnown RBP7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 HDAC9Q9UKV0 1011 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 EXOC6BQ9Y2D4 811 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 AKAP2Q9Y2D5 859 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 MYH13Q9UKX3 1938 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 ZNF646O15015 1829 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 ADAMTSL1Q8N6G6 1762 aa7.13□□□□□ -1.27
HMGB3P24-201ENST00000433260 MYO3BQ8WXR4 1341 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 ADM5C9JUS6 153 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 POTEB2H3BUK9 544 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 SNPHO15079 494 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 PHKA1P46020 1223 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 RRP1P56182 461 aaKnown RBP7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 ZNF280AP59817 542 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 DLGAP5Q15398 846 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 GRIK5Q16478 980 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 PRAMEF18Q5VWM3 479 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 RPAP2Q8IXW5 612 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 XAGE2Q96GT9 111 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 CCDC8Q9H0W5 538 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 CHMP4BQ9H444 224 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms