RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 STRIP1Q5VSL9 837 aa18.86■□□□□ 0.61
PTCD1-204ENST00000430982 TTLL5Q6EMB2 1281 aa18.86■□□□□ 0.61
PTCD1-204ENST00000430982 CEP126Q9P2H0 1117 aa18.86■□□□□ 0.61
PTCD1-204ENST00000430982 POTEFA5A3E0 1075 aa18.85■□□□□ 0.61
PTCD1-204ENST00000430982 IL1R1P14778 569 aa18.85■□□□□ 0.61
PTCD1-204ENST00000430982 VPS37DQ86XT2 251 aa18.85■□□□□ 0.61
PTCD1-204ENST00000430982 FAM84BQ96KN1 310 aaPredicted RBP18.85■□□□□ 0.61
PTCD1-204ENST00000430982 ALDH1A1P00352 501 aa18.84■□□□□ 0.61
PTCD1-204ENST00000430982 SLC5A1P13866 664 aa18.84■□□□□ 0.61
PTCD1-204ENST00000430982 FXR1P51114 621 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTCD1-204ENST00000430982 ATP8B2P98198 1209 aa18.84■□□□□ 0.61
PTCD1-204ENST00000430982 CAVIN4Q5BKX8 364 aa18.84■□□□□ 0.61
PTCD1-204ENST00000430982 C20orf194Q5TEA3 1177 aa18.84■□□□□ 0.61
PTCD1-204ENST00000430982 SPRYD7Q5W111 196 aa18.84■□□□□ 0.61
PTCD1-204ENST00000430982 OTOP1Q7RTM1 612 aa18.84■□□□□ 0.61
PTCD1-204ENST00000430982 DDX19BQ9UMR2 479 aa18.84■□□□□ 0.61
PTCD1-204ENST00000430982 JAG2Q9Y219 1238 aa18.84■□□□□ 0.61
PTCD1-204ENST00000430982 MYO3BQ8WXR4 1341 aa18.83■□□□□ 0.61
PTCD1-204ENST00000430982 FGFR2P21802 821 aa18.83■□□□□ 0.6
PTCD1-204ENST00000430982 NF2P35240 595 aa18.83■□□□□ 0.6
PTCD1-204ENST00000430982 PDE3AQ14432 1141 aa18.83■□□□□ 0.6
PTCD1-204ENST00000430982 ATP2B3Q16720 1220 aa18.83■□□□□ 0.6
PTCD1-204ENST00000430982 LPIN2Q92539 896 aa18.83■□□□□ 0.6
PTCD1-204ENST00000430982 COL1A1P02452 1464 aaPredicted RBP18.83■□□□□ 0.6
PTCD1-204ENST00000430982 MMP14P50281 582 aa18.82■□□□□ 0.6
PTCD1-204ENST00000430982 MKRN3Q13064 507 aaKnown RBP18.82■□□□□ 0.6
PTCD1-204ENST00000430982 G3BP1Q13283 466 aaKnown RBP eCLIP18.82■□□□□ 0.6
PTCD1-204ENST00000430982 TTLL12Q14166 644 aaPredicted RBP18.82■□□□□ 0.6
PTCD1-204ENST00000430982 POLA2Q14181 598 aa18.82■□□□□ 0.6
PTCD1-204ENST00000430982 FBXO33Q7Z6M2 555 aa18.82■□□□□ 0.6
PTCD1-204ENST00000430982 IQSEC3Q9UPP2 1182 aaPredicted RBP18.82■□□□□ 0.6
PTCD1-204ENST00000430982 KIAA0100Q14667 2235 aaKnown RBP18.81■□□□□ 0.6
PTCD1-204ENST00000430982 FRAT2O75474 233 aaPredicted RBP18.81■□□□□ 0.6
PTCD1-204ENST00000430982 BCAMP50895 628 aa18.81■□□□□ 0.6
PTCD1-204ENST00000430982 ARMC9Q7Z3E5 817 aa18.81■□□□□ 0.6
PTCD1-204ENST00000430982 TDRD7Q8NHU6 1098 aaKnown RBP18.81■□□□□ 0.6
PTCD1-204ENST00000430982 ZBED3Q96IU2 234 aaPredicted RBP18.81■□□□□ 0.6
PTCD1-204ENST00000430982 MANSC4A6NHS7 340 aaPredicted RBP18.8■□□□□ 0.6
PTCD1-204ENST00000430982 SASH1O94885 1247 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 INHBEP58166 350 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 TFCP2Q12800 502 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 CHAF1AQ13111 956 aaPredicted RBP18.8■□□□□ 0.6
PTCD1-204ENST00000430982 OS9Q13438 667 aaPredicted RBP18.8■□□□□ 0.6
PTCD1-204ENST00000430982 MAP3K11Q16584 847 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 CEP85Q6P2H3 762 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 IFNL1Q8IU54 200 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 KIAA0825Q8IV33 1275 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 OGFOD1Q8N543 542 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 SSH3Q8TE77 659 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 ARMC5Q96C12 935 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 CHMP4BQ9H444 224 aaKnown RBP18.8■□□□□ 0.6
PTCD1-204ENST00000430982 TRIM17Q9Y577 477 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 SSC5DA1L4H1 1573 aa18.8■□□□□ 0.6
PTCD1-204ENST00000430982 SURF6O75683 361 aaKnown RBP18.79■□□□□ 0.6
PTCD1-204ENST00000430982 APOBEC3FQ8IUX4 373 aaKnown RBP18.79■□□□□ 0.6
PTCD1-204ENST00000430982 CERS5Q8N5B7 392 aa18.79■□□□□ 0.6
PTCD1-204ENST00000430982 FAM205AQ6ZU69 1335 aa18.78■□□□□ 0.6
PTCD1-204ENST00000430982 F8W031 263 aaPredicted RBP18.78■□□□□ 0.6
PTCD1-204ENST00000430982 IGF2BP3O00425 579 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■□□□□ 11
PTCD1-204ENST00000430982 ZBTB48P10074 688 aaPredicted RBP18.78■□□□□ 0.6
PTCD1-204ENST00000430982 RRP1P56182 461 aaKnown RBP18.78■□□□□ 0.6
PTCD1-204ENST00000430982 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
PTCD1-204ENST00000430982 AKAP2Q9Y2D5 859 aa18.78■□□□□ 0.6
PTCD1-204ENST00000430982 PTPN22Q9Y2R2 807 aa18.78■□□□□ 0.6
PTCD1-204ENST00000430982 ADORA1P30542 326 aa18.77■□□□□ 0.6
PTCD1-204ENST00000430982 FKBP1AP62942 108 aaKnown RBP18.77■□□□□ 0.6
PTCD1-204ENST00000430982 MFSD14BQ5SR56 506 aa18.77■□□□□ 0.6
PTCD1-204ENST00000430982 UNCXA6NJT0 531 aa18.76■□□□□ 0.59
PTCD1-204ENST00000430982 TIMM10P62072 90 aa18.76■□□□□ 0.59
PTCD1-204ENST00000430982 NEUROD6Q96NK8 337 aa18.76■□□□□ 0.59
PTCD1-204ENST00000430982 GNL3LQ9NVN8 582 aaKnown RBP18.76■□□□□ 0.59
PTCD1-204ENST00000430982 ANGEL1Q9UNK9 670 aaKnown RBP18.76■□□□□ 0.59
PTCD1-204ENST00000430982 ECM29Q5VYK3 1845 aa18.76■□□□□ 0.59
PTCD1-204ENST00000430982 A0A1B0GUL7 405 aa18.75■□□□□ 0.59
PTCD1-204ENST00000430982 ERO1AQ96HE7 468 aa18.75■□□□□ 0.59
PTCD1-204ENST00000430982 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.75■□□□□ 0.59
PTCD1-204ENST00000430982 SZT2Q5T011 3432 aa18.74■□□□□ 0.59
PTCD1-204ENST00000430982 EN2P19622 333 aaPredicted RBP18.74■□□□□ 0.59
PTCD1-204ENST00000430982 PHKA1P46020 1223 aa18.74■□□□□ 0.59
PTCD1-204ENST00000430982 CAP1Q01518 475 aa18.74■□□□□ 0.59
PTCD1-204ENST00000430982 PRKG1Q13976 671 aa18.74■□□□□ 0.59
PTCD1-204ENST00000430982 RPAP2Q8IXW5 612 aaPredicted RBP18.74■□□□□ 0.59
PTCD1-204ENST00000430982 XAGE2Q96GT9 111 aa18.74■□□□□ 0.59
PTCD1-204ENST00000430982 WNK4Q96J92 1243 aa18.74■□□□□ 0.59
PTCD1-204ENST00000430982 FZD1Q9UP38 647 aa18.74■□□□□ 0.59
PTCD1-204ENST00000430982 NOP58Q9Y2X3 529 aaKnown RBP18.74■□□□□ 0.59
PTCD1-204ENST00000430982 TBC1D22AQ8WUA7 517 aa18.73■□□□□ 0.59
PTCD1-204ENST00000430982 SLC10A4Q96EP9 437 aa18.73■□□□□ 0.59
PTCD1-204ENST00000430982 DEFB129Q9H1M3 183 aa18.73■□□□□ 0.59
PTCD1-204ENST00000430982 TTF2Q9UNY4 1162 aaKnown RBP18.73■□□□□ 0.59
PTCD1-204ENST00000430982 HMMRO75330 724 aa18.72■□□□□ 0.59
PTCD1-204ENST00000430982 DLGAP5Q15398 846 aa18.72■□□□□ 0.59
PTCD1-204ENST00000430982 GORABQ5T7V8 394 aa18.72■□□□□ 0.59
PTCD1-204ENST00000430982 CCDC102BQ68D86 513 aa18.72■□□□□ 0.59
PTCD1-204ENST00000430982 MTMR14Q8NCE2 650 aa18.72■□□□□ 0.59
PTCD1-204ENST00000430982 CD99L2Q8TCZ2 262 aa18.72■□□□□ 0.59
PTCD1-204ENST00000430982 ZNF333Q96JL9 665 aa18.72■□□□□ 0.59
PTCD1-204ENST00000430982 CLMNQ96JQ2 1002 aa18.72■□□□□ 0.59
PTCD1-204ENST00000430982 EXOC6BQ9Y2D4 811 aa18.72■□□□□ 0.59
PTCD1-204ENST00000430982 PPP2R3BQ9Y5P8 575 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms