RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 TESPA1A2RU30 521 aaPredicted RBP23.46■■□□□ 1.35
AC004540.1-202ENST00000430548 CRKP46108 304 aa23.46■■□□□ 1.35
AC004540.1-202ENST00000430548 LRRC24Q50LG9 513 aa23.46■■□□□ 1.35
AC004540.1-202ENST00000430548 DZIP1LQ8IYY4 767 aaKnown RBP23.46■■□□□ 1.35
AC004540.1-202ENST00000430548 TDRD3Q9H7E2 651 aaKnown RBP23.46■■□□□ 1.35
AC004540.1-202ENST00000430548 CENPFP49454 3210 aa23.45■■□□□ 1.34
AC004540.1-202ENST00000430548 GRIK5Q16478 980 aa23.45■■□□□ 1.34
AC004540.1-202ENST00000430548 CDAN1Q8IWY9 1227 aa23.45■■□□□ 1.34
AC004540.1-202ENST00000430548 PDE8BO95263 885 aa23.44■■□□□ 1.34
AC004540.1-202ENST00000430548 HDLBPQ00341 1268 aaKnown RBP23.44■■□□□ 1.34
AC004540.1-202ENST00000430548 TBC1D22AQ8WUA7 517 aa23.44■■□□□ 1.34
AC004540.1-202ENST00000430548 E9PSI1 815 aa23.43■■□□□ 1.34
AC004540.1-202ENST00000430548 METTL24Q5JXM2 366 aa23.43■■□□□ 1.34
AC004540.1-202ENST00000430548 RPAP1Q9BWH6 1393 aaPredicted RBP23.42■■□□□ 1.34
AC004540.1-202ENST00000430548 OTOP1Q7RTM1 612 aa23.42■■□□□ 1.34
AC004540.1-202ENST00000430548 SSH1Q8WYL5 1049 aa23.42■■□□□ 1.34
AC004540.1-202ENST00000430548 PTPN18Q99952 460 aa23.42■■□□□ 1.34
AC004540.1-202ENST00000430548 USP44Q9H0E7 712 aa23.42■■□□□ 1.34
AC004540.1-202ENST00000430548 FGFR2P21802 821 aa23.41■■□□□ 1.34
AC004540.1-202ENST00000430548 CRHR2Q13324 411 aa23.41■■□□□ 1.34
AC004540.1-202ENST00000430548 CAVIN4Q5BKX8 364 aa23.41■■□□□ 1.34
AC004540.1-202ENST00000430548 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.41■■□□□ 1.34
AC004540.1-202ENST00000430548 VPS37DQ86XT2 251 aa23.41■■□□□ 1.34
AC004540.1-202ENST00000430548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.41■■□□□ 1.34
AC004540.1-202ENST00000430548 OPTNQ96CV9 577 aa23.41■■□□□ 1.34
AC004540.1-202ENST00000430548 TMEM39BQ9GZU3 492 aa23.41■■□□□ 1.34
AC004540.1-202ENST00000430548 IQSEC3Q9UPP2 1182 aaPredicted RBP23.41■■□□□ 1.34
AC004540.1-202ENST00000430548 BRCA2P51587 3418 aa23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 TCP10L2B9ZVM9 353 aa23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 TNNI2P48788 182 aa23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 PRPF38BQ5VTL8 546 aaKnown RBP23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 OTUD7BQ6GQQ9 843 aa23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 KLHDC4Q8TBB5 520 aa23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 MS4A4AQ96JQ5 239 aa23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 ELP3Q9H9T3 547 aa23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 ZSWIM8A7E2V4 1837 aa23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 DOCK2Q92608 1830 aa23.4■■□□□ 1.34
AC004540.1-202ENST00000430548 RFX5P48382 616 aaPredicted RBP23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 CHAF1AQ13111 956 aaPredicted RBP23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 VGLL4Q14135 290 aa23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 PUM3Q15397 648 aaKnown RBP23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 TEKT1Q969V4 418 aa23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 ERO1AQ96HE7 468 aa23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 ZDHHC15Q96MV8 337 aa23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 MRIQ9BWK5 157 aa23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 SUGT1Q9Y2Z0 365 aa23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 TRIM17Q9Y577 477 aa23.39■■□□□ 1.33
AC004540.1-202ENST00000430548 MAST3O60307 1309 aa23.38■■□□□ 1.33
AC004540.1-202ENST00000430548 SLFN5Q08AF3 891 aa23.38■■□□□ 1.33
AC004540.1-202ENST00000430548 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.38■■□□□ 1.33
AC004540.1-202ENST00000430548 MKI67P46013 3256 aaKnown RBP23.37■■□□□ 1.33
AC004540.1-202ENST00000430548 BCAMP50895 628 aa23.37■■□□□ 1.33
AC004540.1-202ENST00000430548 ALDH1L2Q3SY69 923 aa23.37■■□□□ 1.33
AC004540.1-202ENST00000430548 FKBP1CQ5VVH2 108 aa23.37■■□□□ 1.33
AC004540.1-202ENST00000430548 KIAA0100Q14667 2235 aaKnown RBP23.36■■□□□ 1.33
AC004540.1-202ENST00000430548 FAM83AQ86UY5 434 aa23.36■■□□□ 1.33
AC004540.1-202ENST00000430548 CNKSR2Q8WXI2 1034 aa23.36■■□□□ 1.33
AC004540.1-202ENST00000430548 BRI3BPQ8WY22 251 aa23.36■■□□□ 1.33
AC004540.1-202ENST00000430548 AK9Q5TCS8 1911 aa23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 MYH2Q9UKX2 1941 aa23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 SPDYE5A6NIY4 337 aa23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 EYA2O00167 538 aa23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 FRAT2O75474 233 aaPredicted RBP23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 IFIT1P09914 478 aaKnown RBP23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 CACNB3P54284 484 aa23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 MAP3K9P80192 1104 aa23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 CAP1Q01518 475 aa23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 APOBEC3HQ6NTF7 200 aaKnown RBP23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 CD99L2Q8TCZ2 262 aa23.35■■□□□ 1.33
AC004540.1-202ENST00000430548 HHIPL2Q6UWX4 724 aa23.34■■□□□ 1.33
AC004540.1-202ENST00000430548 PTPN22Q9Y2R2 807 aa23.34■■□□□ 1.33
AC004540.1-202ENST00000430548 CSADQ9Y600 493 aa23.34■■□□□ 1.33
AC004540.1-202ENST00000430548 SNCAIPQ9Y6H5 919 aa23.34■■□□□ 1.33
AC004540.1-202ENST00000430548 GTF2A2P52657 109 aa23.33■■□□□ 1.33
AC004540.1-202ENST00000430548 SP3Q02447 781 aa23.33■■□□□ 1.33
AC004540.1-202ENST00000430548 INTS3Q68E01 1043 aaKnown RBP23.33■■□□□ 1.33
AC004540.1-202ENST00000430548 ATG9AQ7Z3C6 839 aa23.33■■□□□ 1.33
AC004540.1-202ENST00000430548 LPIN2Q92539 896 aa23.33■■□□□ 1.33
AC004540.1-202ENST00000430548 CCL15-CCL14A0A0B4J2E2 113 aa23.32■■□□□ 1.32
AC004540.1-202ENST00000430548 CCL15Q16663 113 aa23.32■■□□□ 1.32
AC004540.1-202ENST00000430548 TRMT2AQ8IZ69 625 aaKnown RBP23.32■■□□□ 1.32
AC004540.1-202ENST00000430548 ARMC5Q96C12 935 aa23.32■■□□□ 1.32
AC004540.1-202ENST00000430548 OTUD5Q96G74 571 aa23.32■■□□□ 1.32
AC004540.1-202ENST00000430548 TMOD2Q9NZR1 351 aa23.32■■□□□ 1.32
AC004540.1-202ENST00000430548 FBXO3Q9UK99 471 aa23.32■■□□□ 1.32
AC004540.1-202ENST00000430548 PTPRFP10586 1907 aa23.31■■□□□ 1.32
AC004540.1-202ENST00000430548 SLC5A1P13866 664 aa23.31■■□□□ 1.32
AC004540.1-202ENST00000430548 EFCC1Q9HA90 598 aa23.31■■□□□ 1.32
AC004540.1-202ENST00000430548 ZBTB22O15209 634 aa23.3■■□□□ 1.32
AC004540.1-202ENST00000430548 TAF1CQ15572 869 aaPredicted RBP23.3■■□□□ 1.32
AC004540.1-202ENST00000430548 FAM43AQ8N2R8 423 aa23.3■■□□□ 1.32
AC004540.1-202ENST00000430548 WDR66Q8TBY9 1149 aa23.3■■□□□ 1.32
AC004540.1-202ENST00000430548 HOOK2Q96ED9 719 aa23.3■■□□□ 1.32
AC004540.1-202ENST00000430548 WRNIP1Q96S55 665 aa23.3■■□□□ 1.32
AC004540.1-202ENST00000430548 ZCCHC17Q9NP64 241 aaKnown RBP23.3■■□□□ 1.32
AC004540.1-202ENST00000430548 SMC4Q9NTJ3 1288 aa23.3■■□□□ 1.32
AC004540.1-202ENST00000430548 CIAO1O76071 339 aa23.29■■□□□ 1.32
AC004540.1-202ENST00000430548 ERO1BQ86YB8 467 aa23.29■■□□□ 1.32
AC004540.1-202ENST00000430548 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
AC004540.1-202ENST00000430548 POTEFA5A3E0 1075 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms