RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 MIER1Q8N108 512 aa34■■■■□ 3.03
LMO1-202ENST00000428101 HDAC5Q9UQL6 1122 aa34■■■■□ 3.03
LMO1-202ENST00000428101 PPP1R12BO60237 982 aaPredicted RBP33.99■■■■□ 3.03
LMO1-202ENST00000428101 SLC5A1P13866 664 aa33.99■■■■□ 3.03
LMO1-202ENST00000428101 DGKZQ13574 1117 aa33.99■■■■□ 3.03
LMO1-202ENST00000428101 HDLBPQ00341 1268 aaKnown RBP33.98■■■■□ 3.03
LMO1-202ENST00000428101 SPRYD7Q5W111 196 aa33.98■■■■□ 3.03
LMO1-202ENST00000428101 MYH13Q9UKX3 1938 aa33.98■■■■□ 3.03
LMO1-202ENST00000428101 TNFAIP1Q13829 316 aa33.97■■■■□ 3.03
LMO1-202ENST00000428101 PA2G4Q9UQ80 394 aaKnown RBP33.97■■■■□ 3.03
LMO1-202ENST00000428101 CLMNQ96JQ2 1002 aa33.96■■■■□ 3.03
LMO1-202ENST00000428101 USP2O75604 605 aaPredicted RBP33.95■■■■□ 3.03
LMO1-202ENST00000428101 BCAR3O75815 825 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 SLC10A4Q96EP9 437 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 TEPSINQ96N21 525 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 MRIQ9BWK5 157 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 CEP126Q9P2H0 1117 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 SUGT1Q9Y2Z0 365 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 TRIM27P14373 513 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 CDAN1Q8IWY9 1227 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 TEKT1Q969V4 418 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 COPRSQ9NQ92 184 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 TNNQ9UQP3 1299 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 UNCXA6NJT0 531 aa33.93■■■■□ 3.02
LMO1-202ENST00000428101 CCDC85CA6NKD9 419 aa33.93■■■■□ 3.02
LMO1-202ENST00000428101 TCP10L2B9ZVM9 353 aa33.93■■■■□ 3.02
LMO1-202ENST00000428101 IL15P40933 162 aaPredicted RBP33.93■■■■□ 3.02
LMO1-202ENST00000428101 ATP2B3Q16720 1220 aa33.93■■■■□ 3.02
LMO1-202ENST00000428101 IPO8O15397 1037 aaKnown RBP33.92■■■■□ 3.02
LMO1-202ENST00000428101 TBC1D8O95759 1140 aa33.92■■■■□ 3.02
LMO1-202ENST00000428101 GNAI3P08754 354 aa33.92■■■■□ 3.02
LMO1-202ENST00000428101 IREB2P48200 963 aaKnown RBP33.92■■■■□ 3.02
LMO1-202ENST00000428101 SREBF2Q12772 1141 aa33.92■■■■□ 3.02
LMO1-202ENST00000428101 DIEXFQ68CQ4 756 aaKnown RBP33.92■■■■□ 3.02
LMO1-202ENST00000428101 ZDHHC15Q96MV8 337 aa33.92■■■■□ 3.02
LMO1-202ENST00000428101 ATF7IPQ6VMQ6 1270 aa33.91■■■■□ 3.02
LMO1-202ENST00000428101 WNK4Q96J92 1243 aa33.91■■■■□ 3.02
LMO1-202ENST00000428101 TMEM39BQ9GZU3 492 aa33.91■■■■□ 3.02
LMO1-202ENST00000428101 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.91■■■■□ 3.02
LMO1-202ENST00000428101 APOBEC3HQ6NTF7 200 aaKnown RBP33.9■■■■□ 3.02
LMO1-202ENST00000428101 WDR66Q8TBY9 1149 aa33.9■■■■□ 3.02
LMO1-202ENST00000428101 LAMB1P07942 1786 aa33.9■■■■□ 3.02
LMO1-202ENST00000428101 OTOFQ9HC10 1997 aa33.89■■■■□ 3.02
LMO1-202ENST00000428101 MAST3O60307 1309 aa33.89■■■■□ 3.02
LMO1-202ENST00000428101 FRAT1Q92837 279 aaPredicted RBP33.89■■■■□ 3.02
LMO1-202ENST00000428101 ZBTB48P10074 688 aaPredicted RBP33.88■■■■□ 3.01
LMO1-202ENST00000428101 TNNI2P48788 182 aa33.88■■■■□ 3.01
LMO1-202ENST00000428101 CACNB3P54284 484 aa33.88■■■■□ 3.01
LMO1-202ENST00000428101 HHIPL2Q6UWX4 724 aa33.88■■■■□ 3.01
LMO1-202ENST00000428101 HNRNPUQ00839 825 aaKnown RBP eCLIP33.87■■■■□ 3.01
LMO1-202ENST00000428101 MTX1Q13505 466 aa33.87■■■■□ 3.01
LMO1-202ENST00000428101 ANKRD13AQ8IZ07 590 aa33.87■■■■□ 3.01
LMO1-202ENST00000428101 MANSC4A6NHS7 340 aaPredicted RBP33.86■■■■□ 3.01
LMO1-202ENST00000428101 SRGAP3O43295 1099 aa33.86■■■■□ 3.01
LMO1-202ENST00000428101 GJA5P36382 358 aa33.86■■■■□ 3.01
LMO1-202ENST00000428101 CFHR5Q9BXR6 569 aa33.86■■■■□ 3.01
LMO1-202ENST00000428101 PHKA1P46020 1223 aa33.85■■■■□ 3.01
LMO1-202ENST00000428101 ZNF296Q8WUU4 475 aaPredicted RBP33.85■■■■□ 3.01
LMO1-202ENST00000428101 CLUAP1Q96AJ1 413 aa33.85■■■■□ 3.01
LMO1-202ENST00000428101 R3HDMLQ9H3Y0 253 aa33.85■■■■□ 3.01
LMO1-202ENST00000428101 ADORA1P30542 326 aa33.84■■■■□ 3.01
LMO1-202ENST00000428101 INHBEP58166 350 aa33.84■■■■□ 3.01
LMO1-202ENST00000428101 NOM1Q5C9Z4 860 aaKnown RBP33.84■■■■□ 3.01
LMO1-202ENST00000428101 CTU1Q7Z7A3 348 aaKnown RBP33.84■■■■□ 3.01
LMO1-202ENST00000428101 GNL3LQ9NVN8 582 aaKnown RBP33.84■■■■□ 3.01
LMO1-202ENST00000428101 GPR25O00155 361 aa33.83■■■■□ 3.01
LMO1-202ENST00000428101 PRDX5P30044 214 aa33.82■■■■□ 3
LMO1-202ENST00000428101 FKBP1CQ5VVH2 108 aa33.82■■■■□ 3
LMO1-202ENST00000428101 PPP1R3FQ6ZSY5 799 aaPredicted RBP33.82■■■■□ 3
LMO1-202ENST00000428101 IFNL1Q8IU54 200 aa33.82■■■■□ 3
LMO1-202ENST00000428101 ZBTB22O15209 634 aa33.81■■■■□ 3
LMO1-202ENST00000428101 TIMM10P62072 90 aa33.81■■■■□ 3
LMO1-202ENST00000428101 CCDC102BQ68D86 513 aa33.81■■■■□ 3
LMO1-202ENST00000428101 FAM83AQ86UY5 434 aa33.81■■■■□ 3
LMO1-202ENST00000428101 TMOD2Q9NZR1 351 aa33.81■■■■□ 3
LMO1-202ENST00000428101 DENND2AQ9ULE3 1009 aa33.81■■■■□ 3
LMO1-202ENST00000428101 SALL1Q9NSC2 1324 aa33.8■■■■□ 3
LMO1-202ENST00000428101 IGF2BP3O00425 579 aaKnown RBP eCLIP33.8■■■■□ 3
LMO1-202ENST00000428101 SEMA3EO15041 775 aa33.8■■■■□ 3
LMO1-202ENST00000428101 ALDH1A1P00352 501 aa33.8■■■■□ 3
LMO1-202ENST00000428101 GNAI2P04899 355 aa33.8■■■■□ 3
LMO1-202ENST00000428101 ELP3Q9H9T3 547 aa33.8■■■■□ 3
LMO1-202ENST00000428101 DAGLAQ9Y4D2 1042 aa33.8■■■■□ 3
LMO1-202ENST00000428101 TFCP2Q12800 502 aa33.79■■■■□ 3
LMO1-202ENST00000428101 DIXDC1Q155Q3 683 aa33.79■■■■□ 3
LMO1-202ENST00000428101 TMEM57Q8N5G2 664 aa33.79■■■■□ 3
LMO1-202ENST00000428101 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.79■■■■□ 3
LMO1-202ENST00000428101 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.79■■■■□ 3
LMO1-202ENST00000428101 RGS19P49795 217 aa33.78■■■■□ 3
LMO1-202ENST00000428101 MAP3K9P80192 1104 aa33.78■■■■□ 3
LMO1-202ENST00000428101 ZKSCAN2Q63HK3 967 aa33.78■■■■□ 3
LMO1-202ENST00000428101 OPTNQ96CV9 577 aa33.78■■■■□ 3
LMO1-202ENST00000428101 LDHBP07195 334 aaKnown RBP33.77■■■■□ 3
LMO1-202ENST00000428101 VGLL4Q14135 290 aa33.77■■■■□ 3
LMO1-202ENST00000428101 PNMA6EA0A0J9YXQ4 647 aa33.76■■■□□ 2.99
LMO1-202ENST00000428101 A0A1B0GUL7 405 aa33.76■■■□□ 2.99
LMO1-202ENST00000428101 CNKSR2Q8WXI2 1034 aa33.76■■■□□ 2.99
LMO1-202ENST00000428101 TESPA1A2RU30 521 aaPredicted RBP33.75■■■□□ 2.99
LMO1-202ENST00000428101 CDC42EP5Q6NZY7 148 aa33.75■■■□□ 2.99
LMO1-202ENST00000428101 XAGE2Q96GT9 111 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms