RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 NBPF7P0C2Y1 421 aaPredicted RBP21.27■■□□□ 1
UPF3AP3-201ENST00000420996 FBXO33Q7Z6M2 555 aa21.27■■□□□ 1
UPF3AP3-201ENST00000420996 CD99L2Q8TCZ2 262 aa21.27■■□□□ 1
UPF3AP3-201ENST00000420996 MS4A4AQ96JQ5 239 aa21.27■■□□□ 1
UPF3AP3-201ENST00000420996 PTPN22Q9Y2R2 807 aa21.27■■□□□ 1
UPF3AP3-201ENST00000420996 TCP10L2B9ZVM9 353 aa21.26■□□□□ 0.99
UPF3AP3-201ENST00000420996 TNNI2P48788 182 aa21.26■□□□□ 0.99
UPF3AP3-201ENST00000420996 SP3Q02447 781 aa21.26■□□□□ 0.99
UPF3AP3-201ENST00000420996 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.26■□□□□ 0.99
UPF3AP3-201ENST00000420996 VPS37DQ86XT2 251 aa21.26■□□□□ 0.99
UPF3AP3-201ENST00000420996 HDLBPQ00341 1268 aaKnown RBP21.25■□□□□ 0.99
UPF3AP3-201ENST00000420996 RABL6Q3YEC7 729 aaPredicted RBP21.25■□□□□ 0.99
UPF3AP3-201ENST00000420996 CDAN1Q8IWY9 1227 aa21.25■□□□□ 0.99
UPF3AP3-201ENST00000420996 TMEM39BQ9GZU3 492 aa21.25■□□□□ 0.99
UPF3AP3-201ENST00000420996 EFCC1Q9HA90 598 aa21.25■□□□□ 0.99
UPF3AP3-201ENST00000420996 RBBP6Q7Z6E9 1792 aaKnown RBP21.25■□□□□ 0.99
UPF3AP3-201ENST00000420996 MAP3K9P80192 1104 aa21.24■□□□□ 0.99
UPF3AP3-201ENST00000420996 CAVIN4Q5BKX8 364 aa21.24■□□□□ 0.99
UPF3AP3-201ENST00000420996 TBC1D22AQ8WUA7 517 aa21.24■□□□□ 0.99
UPF3AP3-201ENST00000420996 BICC1Q9H694 974 aaKnown RBP21.24■□□□□ 0.99
UPF3AP3-201ENST00000420996 POTEFA5A3E0 1075 aa21.23■□□□□ 0.99
UPF3AP3-201ENST00000420996 GTF2A2P52657 109 aa21.23■□□□□ 0.99
UPF3AP3-201ENST00000420996 VGLL4Q14135 290 aa21.23■□□□□ 0.99
UPF3AP3-201ENST00000420996 GRIK5Q16478 980 aa21.23■□□□□ 0.99
UPF3AP3-201ENST00000420996 METTL24Q5JXM2 366 aa21.23■□□□□ 0.99
UPF3AP3-201ENST00000420996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.23■□□□□ 0.99
UPF3AP3-201ENST00000420996 BRI3BPQ8WY22 251 aa21.23■□□□□ 0.99
UPF3AP3-201ENST00000420996 IQSEC3Q9UPP2 1182 aaPredicted RBP21.23■□□□□ 0.99
UPF3AP3-201ENST00000420996 CSADQ9Y600 493 aa21.23■□□□□ 0.99
UPF3AP3-201ENST00000420996 FRAT2O75474 233 aaPredicted RBP21.22■□□□□ 0.99
UPF3AP3-201ENST00000420996 CHAF1AQ13111 956 aaPredicted RBP21.22■□□□□ 0.99
UPF3AP3-201ENST00000420996 LRRC24Q50LG9 513 aa21.22■□□□□ 0.99
UPF3AP3-201ENST00000420996 ANKRD44Q8N8A2 993 aa21.22■□□□□ 0.99
UPF3AP3-201ENST00000420996 CNKSR2Q8WXI2 1034 aa21.22■□□□□ 0.99
UPF3AP3-201ENST00000420996 TEKT1Q969V4 418 aa21.22■□□□□ 0.99
UPF3AP3-201ENST00000420996 ARMC5Q96C12 935 aa21.22■□□□□ 0.99
UPF3AP3-201ENST00000420996 MRIQ9BWK5 157 aa21.22■□□□□ 0.99
UPF3AP3-201ENST00000420996 CCL15-CCL14A0A0B4J2E2 113 aa21.21■□□□□ 0.99
UPF3AP3-201ENST00000420996 PDE8BO95263 885 aa21.21■□□□□ 0.99
UPF3AP3-201ENST00000420996 CAP1Q01518 475 aa21.21■□□□□ 0.99
UPF3AP3-201ENST00000420996 CCL15Q16663 113 aa21.21■□□□□ 0.99
UPF3AP3-201ENST00000420996 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
UPF3AP3-201ENST00000420996 VGLL2Q8N8G2 317 aa21.21■□□□□ 0.99
UPF3AP3-201ENST00000420996 ZFYVE28Q9HCC9 887 aa21.21■□□□□ 0.99
UPF3AP3-201ENST00000420996 HTTP42858 3142 aa21.21■□□□□ 0.99
UPF3AP3-201ENST00000420996 ARHGEF6Q15052 776 aa21.2■□□□□ 0.98
UPF3AP3-201ENST00000420996 TAF1CQ15572 869 aaPredicted RBP21.2■□□□□ 0.98
UPF3AP3-201ENST00000420996 GCC1Q96CN9 775 aa21.2■□□□□ 0.98
UPF3AP3-201ENST00000420996 ZDHHC15Q96MV8 337 aa21.2■□□□□ 0.98
UPF3AP3-201ENST00000420996 MRPL50Q8N5N7 158 aaKnown RBP21.19■□□□□ 0.98
UPF3AP3-201ENST00000420996 OTUD5Q96G74 571 aa21.19■□□□□ 0.98
UPF3AP3-201ENST00000420996 SUGT1Q9Y2Z0 365 aa21.19■□□□□ 0.98
UPF3AP3-201ENST00000420996 SPDYE5A6NIY4 337 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 BCAMP50895 628 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 CACNB3P54284 484 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 FKBP1CQ5VVH2 108 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 FAM83AQ86UY5 434 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 HOOK2Q96ED9 719 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 TMOD2Q9NZR1 351 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 MAST3O60307 1309 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 PTPRCP08575 1304 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 ZNF521Q96K83 1311 aa21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 KIAA0100Q14667 2235 aaKnown RBP21.18■□□□□ 0.98
UPF3AP3-201ENST00000420996 ERO1BQ86YB8 467 aa21.17■□□□□ 0.98
UPF3AP3-201ENST00000420996 FAM43AQ8N2R8 423 aa21.17■□□□□ 0.98
UPF3AP3-201ENST00000420996 SNCAIPQ9Y6H5 919 aa21.17■□□□□ 0.98
UPF3AP3-201ENST00000420996 KIF16BQ96L93 1317 aa21.17■□□□□ 0.98
UPF3AP3-201ENST00000420996 WDHD1O75717 1129 aaPredicted RBP21.16■□□□□ 0.98
UPF3AP3-201ENST00000420996 CETPP11597 493 aa21.16■□□□□ 0.98
UPF3AP3-201ENST00000420996 EN2P19622 333 aaPredicted RBP21.16■□□□□ 0.98
UPF3AP3-201ENST00000420996 FGFR2P21802 821 aa21.16■□□□□ 0.98
UPF3AP3-201ENST00000420996 APOBEC3HQ6NTF7 200 aaKnown RBP21.16■□□□□ 0.98
UPF3AP3-201ENST00000420996 HHIPL2Q6UWX4 724 aa21.16■□□□□ 0.98
UPF3AP3-201ENST00000420996 KLHDC4Q8TBB5 520 aa21.16■□□□□ 0.98
UPF3AP3-201ENST00000420996 USP44Q9H0E7 712 aa21.16■□□□□ 0.98
UPF3AP3-201ENST00000420996 IFIT1P09914 478 aaKnown RBP21.15■□□□□ 0.98
UPF3AP3-201ENST00000420996 PUM3Q15397 648 aaKnown RBP21.15■□□□□ 0.98
UPF3AP3-201ENST00000420996 NBPF11Q86T75 865 aa21.15■□□□□ 0.98
UPF3AP3-201ENST00000420996 ZNF333Q96JL9 665 aa21.15■□□□□ 0.98
UPF3AP3-201ENST00000420996 WRNIP1Q96S55 665 aa21.15■□□□□ 0.98
UPF3AP3-201ENST00000420996 TMEM106CQ9BVX2 250 aa21.15■□□□□ 0.98
UPF3AP3-201ENST00000420996 ZCCHC17Q9NP64 241 aaKnown RBP21.15■□□□□ 0.98
UPF3AP3-201ENST00000420996 MYH13Q9UKX3 1938 aa21.15■□□□□ 0.98
UPF3AP3-201ENST00000420996 ZNF316A6NFI3 1004 aaPredicted RBP21.14■□□□□ 0.97
UPF3AP3-201ENST00000420996 DCAF15Q66K64 600 aa21.14■□□□□ 0.97
UPF3AP3-201ENST00000420996 ZKSCAN4Q969J2 545 aaPredicted RBP21.14■□□□□ 0.97
UPF3AP3-201ENST00000420996 PTCH2Q9Y6C5 1203 aa21.14■□□□□ 0.97
UPF3AP3-201ENST00000420996 CENPFP49454 3210 aa21.14■□□□□ 0.97
UPF3AP3-201ENST00000420996 RPAP1Q9BWH6 1393 aaPredicted RBP21.13■□□□□ 0.97
UPF3AP3-201ENST00000420996 TLR2O60603 784 aa21.13■□□□□ 0.97
UPF3AP3-201ENST00000420996 PPIL2Q13356 520 aa21.13■□□□□ 0.97
UPF3AP3-201ENST00000420996 SNAPC2Q13487 334 aa21.13■□□□□ 0.97
UPF3AP3-201ENST00000420996 SLC9C1Q4G0N8 1177 aa21.13■□□□□ 0.97
UPF3AP3-201ENST00000420996 BTBD19C9JJ37 291 aa21.12■□□□□ 0.97
UPF3AP3-201ENST00000420996 IRF6O14896 467 aa21.12■□□□□ 0.97
UPF3AP3-201ENST00000420996 WDR66Q8TBY9 1149 aa21.12■□□□□ 0.97
UPF3AP3-201ENST00000420996 SSH1Q8WYL5 1049 aa21.12■□□□□ 0.97
UPF3AP3-201ENST00000420996 MKI67P46013 3256 aaKnown RBP21.11■□□□□ 0.97
UPF3AP3-201ENST00000420996 EYA2O00167 538 aa21.11■□□□□ 0.97
UPF3AP3-201ENST00000420996 SLC5A1P13866 664 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms