RNA–Protein interactions for RNA: ENST00000415338.1

AC239798.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239798.2, Length 3,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239798.2-201ENST00000415338 SLC3A2P08195 630 aaKnown RBP16.13■□□□□ 0.17
AC239798.2-201ENST00000415338 RESTQ13127 1097 aa16.13■□□□□ 0.17
AC239798.2-201ENST00000415338 MRPS27Q92552 414 aaKnown RBP16.13■□□□□ 0.17
AC239798.2-201ENST00000415338 CLSTN2Q9H4D0 955 aa16.13■□□□□ 0.17
AC239798.2-201ENST00000415338 RGPD1P0DJD0 1748 aa16.13■□□□□ 0.17
AC239798.2-201ENST00000415338 SPATA5Q8NB90 893 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 TRIM22Q8IYM9 498 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 UBE2Q2Q8WVN8 375 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 PDLIM2Q96JY6 352 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 CTDNEP1O95476 244 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 CRKLP46109 303 aaKnown RBP16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 NDUFA8P51970 172 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 TPM4P67936 248 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 CCAR2Q8N163 923 aaKnown RBP16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 GOLPH3LQ9H4A5 285 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 PCDHA7Q9UN72 937 aa16.12■□□□□ 0.17
AC239798.2-201ENST00000415338 UVSSAQ2YD98 709 aa16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 RASGRF1Q13972 1273 aa16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 TMC6Q7Z403 805 aa16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 ANGEL1Q9UNK9 670 aaKnown RBP16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 PUM3Q15397 648 aaKnown RBP16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 CCDC152Q4G0S7 254 aa16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 NAT10Q9H0A0 1025 aaKnown RBP16.11■□□□□ 0.17
AC239798.2-201ENST00000415338 STX1AQ16623 288 aa16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 CFAP100Q494V2 611 aa16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 ANO10Q9NW15 660 aa16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 ANKIB1Q9P2G1 1089 aa16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 CARMIL3Q8ND23 1372 aa16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 SSRP1Q08945 709 aaKnown RBP16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 WTAPQ15007 396 aa16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 TTF1Q15361 905 aaPredicted RBP16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 CYB5R4Q7L1T6 521 aa16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 STAMQ92783 540 aa16.1■□□□□ 0.17
AC239798.2-201ENST00000415338 LOC102724428A0A0B4J2F2 783 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 SIK1P57059 783 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 SLC4A9Q96Q91 983 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 FAM208AQ9UK61 1670 aaKnown RBP16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 SMIM22K7EJ46 135 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 NRDCO43847 1150 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 CYP19A1P11511 503 aaPredicted RBP16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 TNNT1P13805 278 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 SYKP43405 635 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 KRT40Q6A162 431 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 CCDC87Q9NVE4 849 aa16.09■□□□□ 0.17
AC239798.2-201ENST00000415338 AFMP43652 599 aa16.08■□□□□ 0.17
AC239798.2-201ENST00000415338 CNNM3Q8NE01 707 aa16.08■□□□□ 0.17
AC239798.2-201ENST00000415338 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 XRN1Q8IZH2 1706 aaKnown RBP16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 FAM160A1Q05DH4 1040 aa16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 ANKRD18AQ8IVF6 992 aa16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 TMEM87AQ8NBN3 555 aa16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 LPIN2Q92539 896 aa16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 GNL3LQ9NVN8 582 aaKnown RBP16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 IFNKQ9P0W0 207 aa16.08■□□□□ 0.16
AC239798.2-201ENST00000415338 BTBD18B2RXH4 712 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 COBLO75128 1261 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 MYSM1Q5VVJ2 828 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 CDKL5O76039 1030 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 DYNLL1P63167 89 aaKnown RBP16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 GOLGA8FQ08AF8 430 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 GOLGA8DPQ0D2H9 430 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 IFNL3Q8IZI9 196 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 CPLX3Q8WVH0 158 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 PKNOX2Q96KN3 472 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 UQCRFS1P1P0C7P4 283 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 SKILP12757 684 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 ADD2P35612 726 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 RTN1Q16799 776 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 FAM47AQ5JRC9 791 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 MEX3CQ5U5Q3 659 aaKnown RBP16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 USPL1Q5W0Q7 1092 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 GPR101Q96P66 508 aaPredicted RBP16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 AATFQ9NY61 560 aaKnown RBP eCLIP16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 ZSWIM5Q9P217 1185 aa16.07■□□□□ 0.16
AC239798.2-201ENST00000415338 ZPR1O75312 459 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 CBX1P83916 185 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 CHRNDQ07001 517 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 DPCR1Q3MIW9 517 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 HS1BP3Q53T59 392 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 ANO1Q5XXA6 986 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 SRP68Q9UHB9 627 aaKnown RBP16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 RIPOR2Q9Y4F9 1068 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 NEDD4P46934 1319 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 GNPATO15228 680 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 CIAO1O76071 339 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 ZNF202O95125 648 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 ZNF75DP51815 510 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 DHX8Q14562 1220 aaKnown RBP16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 FBXO18Q8NFZ0 1043 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms