RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SYNE3Q6ZMZ3 975 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 CCDC150Q8NCX0 1101 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 APPBP2Q92624 585 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 ISCA1Q9BUE6 129 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 PCDH11XQ9BZA7 1347 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 PCDH11YQ9BZA8 1340 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 TNS3Q68CZ2 1445 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 PRC1O43663 620 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 FGAP02671 866 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 DPCR1Q3MIW9 517 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 MYSM1Q5VVJ2 828 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 TTLL5Q6EMB2 1281 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 ARMCX5Q6P1M9 558 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 RAB11FIP4Q86YS3 637 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 PLA2G12BQ9BX93 195 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 ORC3Q9UBD5 711 aaPredicted RBP11.36□□□□□ -0.59
CD44-206ENST00000415148 HPS5Q9UPZ3 1129 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 CLIC4Q9Y696 253 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 KCPQ6ZWJ8 1503 aa11.36□□□□□ -0.59
CD44-206ENST00000415148 PSDA5PKW4 1024 aaPredicted RBP11.35□□□□□ -0.59
CD44-206ENST00000415148 BIN1O00499 593 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 ZNF213O14771 459 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 IKBKBO14920 756 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 SLC3A2P08195 630 aaKnown RBP11.35□□□□□ -0.59
CD44-206ENST00000415148 FKBP4Q02790 459 aaKnown RBP eCLIP11.35□□□□□ -0.59
CD44-206ENST00000415148 GORABQ5T7V8 394 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 XAGE2Q96GT9 111 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 ZNF594Q96JF6 807 aaPredicted RBP11.35□□□□□ -0.59
CD44-206ENST00000415148 FAM53CQ9NYF3 392 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 KLF18A0A0U1RQI7 1052 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 CPLX1O14810 134 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 FANCGO15287 622 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 FOXP2O15409 715 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 NRDCO43847 1150 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 ZNF202O95125 648 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 TCIRG1Q13488 830 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 WASHC4Q2M389 1173 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 ANO1Q5XXA6 986 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 ISM2Q6H9L7 571 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 ZNF397Q8NF99 534 aaPredicted RBP11.35□□□□□ -0.59
CD44-206ENST00000415148 ZCRB1Q8TBF4 217 aaKnown RBP11.35□□□□□ -0.59
CD44-206ENST00000415148 ERO1AQ96HE7 468 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
CD44-206ENST00000415148 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
CD44-206ENST00000415148 PODXL2Q9NZ53 605 aa11.35□□□□□ -0.59
CD44-206ENST00000415148 MYO1BO43795 1136 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 PPP6R2O75170 966 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 A1BGP04217 495 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 CSF1RP07333 972 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 TERF2Q15554 542 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 ERCC6LQ2NKX8 1250 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 RALYLQ86SE5 291 aaKnown RBP11.34□□□□□ -0.59
CD44-206ENST00000415148 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
CD44-206ENST00000415148 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.34□□□□□ -0.59
CD44-206ENST00000415148 GOLGA8BA8MQT2 603 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 CDKL5O76039 1030 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 KIF23Q02241 960 aaPredicted RBP11.34□□□□□ -0.59
CD44-206ENST00000415148 GOLGA8FQ08AF8 430 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 GOLGA8DPQ0D2H9 430 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 SLC39A14Q15043 492 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 AXDND1Q5T1B0 1012 aaPredicted RBP11.34□□□□□ -0.59
CD44-206ENST00000415148 SYT10Q6XYQ8 523 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 PPP1R13BQ96KQ4 1090 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 C4AP0C0L4 1744 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 C4BP0C0L5 1744 aa11.34□□□□□ -0.59
CD44-206ENST00000415148 SPATA31A3Q5VYP0 1347 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 FAM237AA0A1B0GTK4 181 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 CCP110O43303 1012 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 PCCAP05165 728 aaPredicted RBP11.33□□□□□ -0.6
CD44-206ENST00000415148 POLR3DP05423 398 aaPredicted RBP11.33□□□□□ -0.6
CD44-206ENST00000415148 ANTXR2P58335 489 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 CHRNA2Q15822 529 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 TMC6Q7Z403 805 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 ZBTB3Q9H5J0 574 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 IFNKQ9P0W0 207 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 TNS2Q63HR2 1409 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 GABPB1Q06547 395 aaPredicted RBP11.33□□□□□ -0.6
CD44-206ENST00000415148 TRDNQ13061 729 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 TTF1Q15361 905 aaPredicted RBP11.33□□□□□ -0.6
CD44-206ENST00000415148 ELOA2Q8IYF1 753 aaPredicted RBP11.33□□□□□ -0.6
CD44-206ENST00000415148 JMYQ8N9B5 988 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 TUBE1Q9UJT0 475 aa11.33□□□□□ -0.6
CD44-206ENST00000415148 ZMYM6O95789 1325 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 ERICH4A6NGS2 130 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 SLU7O95391 586 aaKnown RBP11.32□□□□□ -0.6
CD44-206ENST00000415148 NCAPHQ15003 741 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 KRT222Q8N1A0 295 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 NKX2-3Q8TAU0 364 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 TEX13AQ9BXU3 409 aaPredicted RBP11.32□□□□□ -0.6
CD44-206ENST00000415148 PUS7LQ9H0K6 701 aaKnown RBP11.32□□□□□ -0.6
CD44-206ENST00000415148 TAOK2Q9UL54 1235 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 ATRNO75882 1429 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 MYH7P12883 1935 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 WDR17Q8IZU2 1322 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 KIF28PB7ZC32 967 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 GPAA1O43292 621 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 SMC2O95347 1197 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 ATP1A3P13637 1013 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 PFKFB1P16118 471 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 ZAP70P43403 619 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms