RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 CITED4Q96RK1 184 aa7.86□□□□□ -1.15
PTPRK-209ENST00000415046 CYP4F12Q9HCS2 524 aa7.86□□□□□ -1.15
PTPRK-209ENST00000415046 NCAPD3P42695 1498 aa7.86□□□□□ -1.15
PTPRK-209ENST00000415046 MED26O95402 600 aa7.85□□□□□ -1.15
PTPRK-209ENST00000415046 MAP4P27816 1152 aaKnown RBP7.85□□□□□ -1.15
PTPRK-209ENST00000415046 KIAA0319Q5VV43 1072 aa7.85□□□□□ -1.15
PTPRK-209ENST00000415046 PRR19A6NJB7 356 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 IGHA2P01877 340 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 SPINK2P20155 84 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 ORC1Q13415 861 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 ZNF423Q2M1K9 1284 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 SPRED3Q2MJR0 410 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 SGO2Q562F6 1265 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 EXOSC6Q5RKV6 272 aaKnown RBP7.84□□□□□ -1.15
PTPRK-209ENST00000415046 INTS5Q6P9B9 1019 aaKnown RBP7.84□□□□□ -1.15
PTPRK-209ENST00000415046 ERICH6Q7L0X2 663 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 C12orf50Q8NA57 414 aaPredicted RBP7.84□□□□□ -1.15
PTPRK-209ENST00000415046 SHKBP1Q8TBC3 707 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 ARID3AQ99856 593 aa7.84□□□□□ -1.15
PTPRK-209ENST00000415046 CPNE3O75131 537 aaKnown RBP7.83□□□□□ -1.16
PTPRK-209ENST00000415046 GRIK1P39086 918 aa7.83□□□□□ -1.16
PTPRK-209ENST00000415046 RSF1Q96T23 1441 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-209ENST00000415046 GPR182O15218 404 aa7.82□□□□□ -1.16
PTPRK-209ENST00000415046 ITPKAP23677 461 aa7.82□□□□□ -1.16
PTPRK-209ENST00000415046 PDE4CQ08493 712 aa7.82□□□□□ -1.16
PTPRK-209ENST00000415046 C2CD4AQ8NCU7 369 aaPredicted RBP7.82□□□□□ -1.16
PTPRK-209ENST00000415046 ZNF576Q9H609 170 aa7.82□□□□□ -1.16
PTPRK-209ENST00000415046 NPHS2Q9NP85 383 aa7.82□□□□□ -1.16
PTPRK-209ENST00000415046 B3GALT4O96024 378 aa7.81□□□□□ -1.16
PTPRK-209ENST00000415046 DRD2P14416 443 aa7.81□□□□□ -1.16
PTPRK-209ENST00000415046 TRIM56Q9BRZ2 755 aaKnown RBP7.81□□□□□ -1.16
PTPRK-209ENST00000415046 DNAJC25Q9H1X3 360 aa7.81□□□□□ -1.16
PTPRK-209ENST00000415046 TOP2AP11388 1531 aaKnown RBP7.8□□□□□ -1.16
PTPRK-209ENST00000415046 SUPT5HO00267 1087 aaKnown RBP7.8□□□□□ -1.16
PTPRK-209ENST00000415046 CYP11A1P05108 521 aa7.8□□□□□ -1.16
PTPRK-209ENST00000415046 CTSBP07858 339 aa7.8□□□□□ -1.16
PTPRK-209ENST00000415046 ADH5P11766 374 aa7.8□□□□□ -1.16
PTPRK-209ENST00000415046 MAOBP27338 520 aa7.8□□□□□ -1.16
PTPRK-209ENST00000415046 SOX4Q06945 474 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-209ENST00000415046 HP1BP3Q5SSJ5 553 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-209ENST00000415046 PRPF40BQ6NWY9 871 aaKnown RBP7.8□□□□□ -1.16
PTPRK-209ENST00000415046 DTX1Q86Y01 620 aa7.8□□□□□ -1.16
PTPRK-209ENST00000415046 MFSD14AQ96MC6 490 aa7.8□□□□□ -1.16
PTPRK-209ENST00000415046 EHD4Q9H223 541 aa7.8□□□□□ -1.16
PTPRK-209ENST00000415046 WDR64B1ANS9 1081 aa7.79□□□□□ -1.16
PTPRK-209ENST00000415046 EIF1AYO14602 144 aaKnown RBP7.79□□□□□ -1.16
PTPRK-209ENST00000415046 RXRBP28702 533 aa7.79□□□□□ -1.16
PTPRK-209ENST00000415046 PTPN12Q05209 780 aaKnown RBP7.79□□□□□ -1.16
PTPRK-209ENST00000415046 POU4F3Q15319 338 aa7.79□□□□□ -1.16
PTPRK-209ENST00000415046 CDPF1Q6NVV7 123 aa7.79□□□□□ -1.16
PTPRK-209ENST00000415046 CCER1Q8TC90 406 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-209ENST00000415046 CCDC74AQ96AQ1 378 aa7.79□□□□□ -1.16
PTPRK-209ENST00000415046 ALKBH8Q96BT7 664 aaKnown RBP7.79□□□□□ -1.16
PTPRK-209ENST00000415046 RBCK1Q9BYM8 510 aa7.79□□□□□ -1.16
PTPRK-209ENST00000415046 ABCB6Q9NP58 842 aa7.79□□□□□ -1.16
PTPRK-209ENST00000415046 FAM95CA0A1B0GW59 222 aa7.78□□□□□ -1.16
PTPRK-209ENST00000415046 USP11P51784 963 aa7.78□□□□□ -1.16
PTPRK-209ENST00000415046 CPSF6Q16630 551 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTPRK-209ENST00000415046 PAOXQ6QHF9 649 aa7.78□□□□□ -1.16
PTPRK-209ENST00000415046 DDX54Q8TDD1 881 aaKnown RBP7.78□□□□□ -1.16
PTPRK-209ENST00000415046 FBLIM1Q8WUP2 373 aa7.78□□□□□ -1.16
PTPRK-209ENST00000415046 EZH1Q92800 747 aaPredicted RBP7.78□□□□□ -1.16
PTPRK-209ENST00000415046 DMRTB1Q96MA1 342 aa7.78□□□□□ -1.16
PTPRK-209ENST00000415046 NIF3L1Q9GZT8 377 aa7.78□□□□□ -1.16
PTPRK-209ENST00000415046 ZFYVE1Q9HBF4 777 aa7.78□□□□□ -1.16
PTPRK-209ENST00000415046 PRDM2Q13029 1718 aa7.78□□□□□ -1.16
PTPRK-209ENST00000415046 ADAMTS4O75173 837 aa7.77□□□□□ -1.17
PTPRK-209ENST00000415046 F13BP05160 661 aa7.77□□□□□ -1.17
PTPRK-209ENST00000415046 MCTP1Q6DN14 999 aa7.77□□□□□ -1.17
PTPRK-209ENST00000415046 KRTAP1-3Q8IUG1 177 aa7.77□□□□□ -1.17
PTPRK-209ENST00000415046 GIMAP7Q8NHV1 300 aa7.77□□□□□ -1.17
PTPRK-209ENST00000415046 TMC1Q8TDI8 760 aa7.77□□□□□ -1.17
PTPRK-209ENST00000415046 YIPF2Q9BWQ6 316 aa7.77□□□□□ -1.17
PTPRK-209ENST00000415046 PIM2Q9P1W9 311 aa7.77□□□□□ -1.17
PTPRK-209ENST00000415046 ACTL7BQ9Y614 415 aa7.77□□□□□ -1.17
PTPRK-209ENST00000415046 KIF21AQ7Z4S6 1674 aa7.76□□□□□ -1.17
PTPRK-209ENST00000415046 SOWAHDA6NJG2 315 aa7.76□□□□□ -1.17
PTPRK-209ENST00000415046 GP2P55259 537 aaKnown RBP7.76□□□□□ -1.17
PTPRK-209ENST00000415046 FBXL6Q8N531 539 aa7.76□□□□□ -1.17
PTPRK-209ENST00000415046 CSRNP1Q96S65 589 aa7.76□□□□□ -1.17
PTPRK-209ENST00000415046 CORO1BQ9BR76 489 aa7.76□□□□□ -1.17
PTPRK-209ENST00000415046 OAS3Q9Y6K5 1087 aaKnown RBP7.76□□□□□ -1.17
PTPRK-209ENST00000415046 NESP48681 1621 aa7.75□□□□□ -1.17
PTPRK-209ENST00000415046 ECEL1O95672 775 aa7.75□□□□□ -1.17
PTPRK-209ENST00000415046 HOXA10P31260 410 aaPredicted RBP7.75□□□□□ -1.17
PTPRK-209ENST00000415046 NFKBIBQ15653 356 aa7.75□□□□□ -1.17
PTPRK-209ENST00000415046 RPS26P11Q5JNZ5 115 aaPredicted RBP7.75□□□□□ -1.17
PTPRK-209ENST00000415046 GLIS3Q8NEA6 775 aa7.75□□□□□ -1.17
PTPRK-209ENST00000415046 ATG3Q9NT62 314 aa7.75□□□□□ -1.17
PTPRK-209ENST00000415046 PRKAG2Q9UGJ0 569 aa7.75□□□□□ -1.17
PTPRK-209ENST00000415046 TRAK1Q9UPV9 953 aa7.75□□□□□ -1.17
PTPRK-209ENST00000415046 GNEQ9Y223 722 aaKnown RBP7.75□□□□□ -1.17
PTPRK-209ENST00000415046 TMEM238LA0A1B0GVL6 79 aa7.74□□□□□ -1.17
PTPRK-209ENST00000415046 GADD45BO75293 160 aaPredicted RBP7.74□□□□□ -1.17
PTPRK-209ENST00000415046 AP3B2Q13367 1082 aa7.74□□□□□ -1.17
PTPRK-209ENST00000415046 GRM2Q14416 872 aa7.74□□□□□ -1.17
PTPRK-209ENST00000415046 ZAR1Q86SH2 424 aa7.74□□□□□ -1.17
PTPRK-209ENST00000415046 METTL22Q9BUU2 404 aaPredicted RBP7.74□□□□□ -1.17
PTPRK-209ENST00000415046 OSBPL1AQ9BXW6 950 aa7.74□□□□□ -1.17
PTPRK-209ENST00000415046 GSX1Q9H4S2 264 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms