RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 SPRYD7Q5W111 196 aa19.42■□□□□ 0.7
ACTB-202ENST00000414620 ATG9AQ7Z3C6 839 aa19.42■□□□□ 0.7
ACTB-202ENST00000414620 CDAN1Q8IWY9 1227 aa19.42■□□□□ 0.7
ACTB-202ENST00000414620 MEIS3Q99687 375 aa19.42■□□□□ 0.7
ACTB-202ENST00000414620 SUPT20HL1Q3ZLR7 823 aa19.41■□□□□ 0.7
ACTB-202ENST00000414620 TBC1D22AQ8WUA7 517 aa19.41■□□□□ 0.7
ACTB-202ENST00000414620 PA2G4Q9UQ80 394 aaKnown RBP19.41■□□□□ 0.7
ACTB-202ENST00000414620 TM4SF4P48230 202 aa19.4■□□□□ 0.7
ACTB-202ENST00000414620 SREBF2Q12772 1141 aa19.4■□□□□ 0.7
ACTB-202ENST00000414620 TNFAIP1Q13829 316 aa19.4■□□□□ 0.7
ACTB-202ENST00000414620 MAP3K11Q16584 847 aa19.4■□□□□ 0.7
ACTB-202ENST00000414620 SLC10A4Q96EP9 437 aa19.4■□□□□ 0.7
ACTB-202ENST00000414620 WNK4Q96J92 1243 aa19.4■□□□□ 0.7
ACTB-202ENST00000414620 KIF16BQ96L93 1317 aa19.4■□□□□ 0.7
ACTB-202ENST00000414620 MYH2Q9UKX2 1941 aa19.39■□□□□ 0.7
ACTB-202ENST00000414620 USP2O75604 605 aaPredicted RBP19.39■□□□□ 0.69
ACTB-202ENST00000414620 IREB2P48200 963 aaKnown RBP19.39■□□□□ 0.69
ACTB-202ENST00000414620 CACNB3P54284 484 aa19.39■□□□□ 0.69
ACTB-202ENST00000414620 LPIN2Q92539 896 aa19.39■□□□□ 0.69
ACTB-202ENST00000414620 TEKT1Q969V4 418 aa19.39■□□□□ 0.69
ACTB-202ENST00000414620 TMEM39BQ9GZU3 492 aa19.39■□□□□ 0.69
ACTB-202ENST00000414620 TNNQ9UQP3 1299 aa19.39■□□□□ 0.69
ACTB-202ENST00000414620 ATP2B3Q16720 1220 aa19.37■□□□□ 0.69
ACTB-202ENST00000414620 CTU1Q7Z7A3 348 aaKnown RBP19.37■□□□□ 0.69
ACTB-202ENST00000414620 ZNF296Q8WUU4 475 aaPredicted RBP19.37■□□□□ 0.69
ACTB-202ENST00000414620 TEPSINQ96N21 525 aa19.37■□□□□ 0.69
ACTB-202ENST00000414620 MAST3O60307 1309 aa19.36■□□□□ 0.69
ACTB-202ENST00000414620 CIAO1O76071 339 aa19.36■□□□□ 0.69
ACTB-202ENST00000414620 GJA5P36382 358 aa19.36■□□□□ 0.69
ACTB-202ENST00000414620 TNNI2P48788 182 aa19.36■□□□□ 0.69
ACTB-202ENST00000414620 HDLBPQ00341 1268 aaKnown RBP19.36■□□□□ 0.69
ACTB-202ENST00000414620 ANKRD13AQ8IZ07 590 aa19.36■□□□□ 0.69
ACTB-202ENST00000414620 FRAT1Q92837 279 aaPredicted RBP19.36■□□□□ 0.69
ACTB-202ENST00000414620 R3HDMLQ9H3Y0 253 aa19.36■□□□□ 0.69
ACTB-202ENST00000414620 ELP3Q9H9T3 547 aa19.36■□□□□ 0.69
ACTB-202ENST00000414620 CEP126Q9P2H0 1117 aa19.36■□□□□ 0.69
ACTB-202ENST00000414620 MANSC4A6NHS7 340 aaPredicted RBP19.35■□□□□ 0.69
ACTB-202ENST00000414620 GPR25O00155 361 aa19.35■□□□□ 0.69
ACTB-202ENST00000414620 BCAR3O75815 825 aa19.35■□□□□ 0.69
ACTB-202ENST00000414620 ZBTB48P10074 688 aaPredicted RBP19.35■□□□□ 0.69
ACTB-202ENST00000414620 INTS3Q68E01 1043 aaKnown RBP19.35■□□□□ 0.69
ACTB-202ENST00000414620 TMOD2Q9NZR1 351 aa19.35■□□□□ 0.69
ACTB-202ENST00000414620 FBXO3Q9UK99 471 aa19.35■□□□□ 0.69
ACTB-202ENST00000414620 HDAC5Q9UQL6 1122 aa19.35■□□□□ 0.69
ACTB-202ENST00000414620 TRIM27P14373 513 aa19.34■□□□□ 0.69
ACTB-202ENST00000414620 ADORA1P30542 326 aa19.34■□□□□ 0.69
ACTB-202ENST00000414620 IL15P40933 162 aaPredicted RBP19.34■□□□□ 0.69
ACTB-202ENST00000414620 MIER1Q8N108 512 aa19.34■□□□□ 0.69
ACTB-202ENST00000414620 ARHGAP45Q92619 1136 aa19.34■□□□□ 0.69
ACTB-202ENST00000414620 CLUAP1Q96AJ1 413 aa19.34■□□□□ 0.69
ACTB-202ENST00000414620 ZDHHC15Q96MV8 337 aa19.34■□□□□ 0.69
ACTB-202ENST00000414620 DOCK2Q92608 1830 aa19.33■□□□□ 0.69
ACTB-202ENST00000414620 IGF2BP3O00425 579 aaKnown RBP eCLIP19.33■□□□□ 0.68
ACTB-202ENST00000414620 PHKA1P46020 1223 aa19.33■□□□□ 0.68
ACTB-202ENST00000414620 APOBEC3HQ6NTF7 200 aaKnown RBP19.33■□□□□ 0.68
ACTB-202ENST00000414620 IFNL1Q8IU54 200 aa19.33■□□□□ 0.68
ACTB-202ENST00000414620 WDR66Q8TBY9 1149 aa19.33■□□□□ 0.68
ACTB-202ENST00000414620 COPRSQ9NQ92 184 aa19.33■□□□□ 0.68
ACTB-202ENST00000414620 SUGT1Q9Y2Z0 365 aa19.33■□□□□ 0.68
ACTB-202ENST00000414620 SRGAP3O43295 1099 aa19.32■□□□□ 0.68
ACTB-202ENST00000414620 GNAI3P08754 354 aa19.32■□□□□ 0.68
ACTB-202ENST00000414620 PRDX5P30044 214 aa19.32■□□□□ 0.68
ACTB-202ENST00000414620 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
ACTB-202ENST00000414620 CNKSR2Q8WXI2 1034 aa19.32■□□□□ 0.68
ACTB-202ENST00000414620 OPTNQ96CV9 577 aa19.32■□□□□ 0.68
ACTB-202ENST00000414620 UNCXA6NJT0 531 aa19.31■□□□□ 0.68
ACTB-202ENST00000414620 SOX10P56693 466 aa19.31■□□□□ 0.68
ACTB-202ENST00000414620 VGLL4Q14135 290 aa19.31■□□□□ 0.68
ACTB-202ENST00000414620 DIXDC1Q155Q3 683 aa19.31■□□□□ 0.68
ACTB-202ENST00000414620 HHIPL2Q6UWX4 724 aa19.31■□□□□ 0.68
ACTB-202ENST00000414620 ATF7IPQ6VMQ6 1270 aa19.31■□□□□ 0.68
ACTB-202ENST00000414620 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.31■□□□□ 0.68
ACTB-202ENST00000414620 GNL3LQ9NVN8 582 aaKnown RBP19.31■□□□□ 0.68
ACTB-202ENST00000414620 IPO8O15397 1037 aaKnown RBP19.3■□□□□ 0.68
ACTB-202ENST00000414620 FKTNO75072 461 aa19.3■□□□□ 0.68
ACTB-202ENST00000414620 ALDH1A1P00352 501 aa19.3■□□□□ 0.68
ACTB-202ENST00000414620 MLLT1Q03111 559 aaPredicted RBP19.3■□□□□ 0.68
ACTB-202ENST00000414620 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.3■□□□□ 0.68
ACTB-202ENST00000414620 CFHR5Q9BXR6 569 aa19.3■□□□□ 0.68
ACTB-202ENST00000414620 DAGLAQ9Y4D2 1042 aa19.3■□□□□ 0.68
ACTB-202ENST00000414620 INHBEP58166 350 aa19.29■□□□□ 0.68
ACTB-202ENST00000414620 TIMM10P62072 90 aa19.29■□□□□ 0.68
ACTB-202ENST00000414620 MAP3K9P80192 1104 aa19.29■□□□□ 0.68
ACTB-202ENST00000414620 DIEXFQ68CQ4 756 aaKnown RBP19.29■□□□□ 0.68
ACTB-202ENST00000414620 MRIQ9BWK5 157 aa19.29■□□□□ 0.68
ACTB-202ENST00000414620 DENND2AQ9ULE3 1009 aa19.29■□□□□ 0.68
ACTB-202ENST00000414620 HPS5Q9UPZ3 1129 aa19.29■□□□□ 0.68
ACTB-202ENST00000414620 CSADQ9Y600 493 aa19.29■□□□□ 0.68
ACTB-202ENST00000414620 LDHBP07195 334 aaKnown RBP19.28■□□□□ 0.68
ACTB-202ENST00000414620 RGS19P49795 217 aa19.28■□□□□ 0.68
ACTB-202ENST00000414620 TCP10Q12799 353 aa19.28■□□□□ 0.68
ACTB-202ENST00000414620 TFCP2Q12800 502 aa19.28■□□□□ 0.68
ACTB-202ENST00000414620 NOM1Q5C9Z4 860 aaKnown RBP19.28■□□□□ 0.68
ACTB-202ENST00000414620 CCDC102BQ68D86 513 aa19.28■□□□□ 0.68
ACTB-202ENST00000414620 FAM83AQ86UY5 434 aa19.28■□□□□ 0.68
ACTB-202ENST00000414620 OTUD5Q96G74 571 aa19.28■□□□□ 0.68
ACTB-202ENST00000414620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.28■□□□□ 0.68
ACTB-202ENST00000414620 A0A1B0GUL7 405 aa19.27■□□□□ 0.68
ACTB-202ENST00000414620 CDC42EP5Q6NZY7 148 aa19.27■□□□□ 0.68
ACTB-202ENST00000414620 TMEM57Q8N5G2 664 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms